RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 CRYGAP11844 174 aa12.39□□□□□ -0.43
HERC2-204ENST00000563945 HERVK_113P63121 156 aa12.39□□□□□ -0.43
HERC2-204ENST00000563945 MRPL55Q7Z7F7 128 aaKnown RBP12.39□□□□□ -0.43
HERC2-204ENST00000563945 TYMSOSQ8TAI1 123 aa12.39□□□□□ -0.43
HERC2-204ENST00000563945 GEMIN7Q9H840 131 aaKnown RBP12.39□□□□□ -0.43
HERC2-204ENST00000563945 TP73-AS1Q9UF72 201 aa12.38□□□□□ -0.43
HERC2-204ENST00000563945 F8VRH5 84 aa12.37□□□□□ -0.43
HERC2-204ENST00000563945 BCE1O60756 84 aa12.37□□□□□ -0.43
HERC2-204ENST00000563945 G0S2P27469 103 aa12.37□□□□□ -0.43
HERC2-204ENST00000563945 LINC00173Q6ZV60 143 aa12.37□□□□□ -0.43
HERC2-204ENST00000563945 K7EMI3 77 aa12.36□□□□□ -0.43
HERC2-204ENST00000563945 MUC2Q02817 5179 aa12.35□□□□□ -0.43
HERC2-204ENST00000563945 CXCL5P42830 114 aa12.35□□□□□ -0.43
HERC2-204ENST00000563945 FAM19A3Q7Z5A8 133 aa12.34□□□□□ -0.43
HERC2-204ENST00000563945 CDKN2A-AS1Q9UH64 79 aa12.34□□□□□ -0.43
HERC2-204ENST00000563945 A0A087X002 238 aa12.33□□□□□ -0.44
HERC2-204ENST00000563945 IGIPA6NJ69 53 aa12.33□□□□□ -0.44
HERC2-204ENST00000563945 NXT2Q9NPJ8 142 aaKnown RBP12.33□□□□□ -0.44
HERC2-204ENST00000563945 MT-ND4LP03901 98 aa12.32□□□□□ -0.44
HERC2-204ENST00000563945 RPL37AP8A6NKH3 93 aa12.31□□□□□ -0.44
HERC2-204ENST00000563945 LINC00167Q96N53 147 aa12.31□□□□□ -0.44
HERC2-204ENST00000563945 ANAPC16Q96DE5 110 aa12.3□□□□□ -0.44
HERC2-204ENST00000563945 GAGE10A6NGK3 116 aa12.29□□□□□ -0.44
HERC2-204ENST00000563945 UBE2AP49459 152 aa12.29□□□□□ -0.44
HERC2-204ENST00000563945 TIMM17AQ99595 171 aa12.29□□□□□ -0.44
HERC2-204ENST00000563945 PNRC1Q12796 327 aaPredicted RBP12.28□□□□□ -0.44
HERC2-204ENST00000563945 NKAPP1Q8N9T2 125 aa12.28□□□□□ -0.44
HERC2-204ENST00000563945 COX7B2Q8TF08 81 aa12.27□□□□□ -0.45
HERC2-204ENST00000563945 RAB5BP61020 215 aa12.26□□□□□ -0.45
HERC2-204ENST00000563945 PDZD11Q5EBL8 140 aa12.26□□□□□ -0.45
HERC2-204ENST00000563945 TOMM6Q96B49 74 aa12.26□□□□□ -0.45
HERC2-204ENST00000563945 SCGB3A1Q96QR1 104 aa12.26□□□□□ -0.45
HERC2-204ENST00000563945 ANAPC11Q9NYG5 84 aa12.26□□□□□ -0.45
HERC2-204ENST00000563945 SMIM1B2RUZ4 78 aa12.24□□□□□ -0.45
HERC2-204ENST00000563945 ERASQ7Z444 233 aa12.24□□□□□ -0.45
HERC2-204ENST00000563945 KRTAP9-2Q9BYQ4 174 aa12.23□□□□□ -0.45
HERC2-204ENST00000563945 IGKV2D-26A0A0A0MRZ7 120 aa12.22□□□□□ -0.45
HERC2-204ENST00000563945 TINCRA0A1B0GVN0 87 aa12.22□□□□□ -0.45
HERC2-204ENST00000563945 LINC00304Q8N9R0 145 aa12.22□□□□□ -0.45
HERC2-204ENST00000563945 FAM229BQ4G0N7 80 aa12.21□□□□□ -0.45
HERC2-204ENST00000563945 RETNLBQ9BQ08 111 aa12.21□□□□□ -0.45
HERC2-204ENST00000563945 CDIP1Q9H305 208 aa12.21□□□□□ -0.45
HERC2-204ENST00000563945 IGLV5-37A0A075B6J1 123 aa12.2□□□□□ -0.46
HERC2-204ENST00000563945 LINC01549A6NIU2 74 aa12.19□□□□□ -0.46
HERC2-204ENST00000563945 KRTAP13-2Q52LG2 175 aa12.19□□□□□ -0.46
HERC2-204ENST00000563945 IGKV2-28A0A075B6P5 120 aa12.18□□□□□ -0.46
HERC2-204ENST00000563945 ATP5LO75964 103 aa12.18□□□□□ -0.46
HERC2-204ENST00000563945 IGKV2D-28P01615 120 aa12.18□□□□□ -0.46
HERC2-204ENST00000563945 SPINK8P0C7L1 97 aa12.18□□□□□ -0.46
HERC2-204ENST00000563945 KIAA1644Q3SXP7 199 aa12.18□□□□□ -0.46
HERC2-204ENST00000563945 IGLV5-45A0A087WSX0 123 aa12.16□□□□□ -0.46
HERC2-204ENST00000563945 A0A1B0GVG6 124 aa12.16□□□□□ -0.46
HERC2-204ENST00000563945 H3BRM9 83 aa12.16□□□□□ -0.46
HERC2-204ENST00000563945 KRTAP13-1Q8IUC0 172 aa12.16□□□□□ -0.46
HERC2-204ENST00000563945 MRPL18Q9H0U6 180 aaKnown RBP12.16□□□□□ -0.46
HERC2-204ENST00000563945 IGLV7-46A0A075B6I9 117 aa12.15□□□□□ -0.46
HERC2-204ENST00000563945 ADCYAP1P18509 176 aa12.15□□□□□ -0.46
HERC2-204ENST00000563945 RAB14P61106 215 aa12.15□□□□□ -0.46
HERC2-204ENST00000563945 CST9LQ9H4G1 147 aa12.15□□□□□ -0.46
HERC2-204ENST00000563945 PFN2P35080 140 aa12.14□□□□□ -0.47
HERC2-204ENST00000563945 FAM19A1Q7Z5A9 133 aa12.14□□□□□ -0.47
HERC2-204ENST00000563945 PMVKQ15126 192 aa12.13□□□□□ -0.47
HERC2-204ENST00000563945 SCO1O75880 301 aa12.12□□□□□ -0.47
HERC2-204ENST00000563945 CTAG1AP78358 180 aa12.12□□□□□ -0.47
HERC2-204ENST00000563945 PRLHP81277 87 aa12.12□□□□□ -0.47
HERC2-204ENST00000563945 RPL24P83731 157 aaKnown RBP12.12□□□□□ -0.47
HERC2-204ENST00000563945 TPRXLQ17RH7 258 aa12.11□□□□□ -0.47
HERC2-204ENST00000563945 LCE2AQ5TA79 106 aaPredicted RBP12.1□□□□□ -0.47
HERC2-204ENST00000563945 FA2HQ7L5A8 372 aa12.09□□□□□ -0.47
HERC2-204ENST00000563945 TMEM126AQ9H061 195 aa12.09□□□□□ -0.47
HERC2-204ENST00000563945 SMCO4Q9NRQ5 59 aa12.09□□□□□ -0.47
HERC2-204ENST00000563945 TRAV9-1A0A075B6T8 112 aa12.07□□□□□ -0.48
HERC2-204ENST00000563945 TMEM238C9JI98 176 aa12.07□□□□□ -0.48
HERC2-204ENST00000563945 NDUFA6P56556 154 aa12.07□□□□□ -0.48
HERC2-204ENST00000563945 CBLN2Q8IUK8 224 aa12.07□□□□□ -0.48
HERC2-204ENST00000563945 GNB1LQ9BYB4 327 aa12.06□□□□□ -0.48
HERC2-204ENST00000563945 SND1-IT1Q9HBX3 110 aa12.06□□□□□ -0.48
HERC2-204ENST00000563945 ERG28Q9UKR5 140 aa12.06□□□□□ -0.48
HERC2-204ENST00000563945 FAT4Q6V0I7 4981 aa12.06□□□□□ -0.48
HERC2-204ENST00000563945 VPREB1P12018 145 aa12.05□□□□□ -0.48
HERC2-204ENST00000563945 S100PP25815 95 aa12.05□□□□□ -0.48
HERC2-204ENST00000563945 PPDPFQ9H3Y8 114 aa12.05□□□□□ -0.48
HERC2-204ENST00000563945 LINC01546A6NGU7 62 aa12.04□□□□□ -0.48
HERC2-204ENST00000563945 COX17Q14061 63 aa12.04□□□□□ -0.48
HERC2-204ENST00000563945 C4orf48Q5BLP8 95 aa12.04□□□□□ -0.48
HERC2-204ENST00000563945 SPAG11AQ6PDA7 123 aa12.04□□□□□ -0.48
HERC2-204ENST00000563945 PLEKHB2Q96CS7 222 aa12.04□□□□□ -0.48
HERC2-204ENST00000563945 HIGD2AQ9BW72 106 aa12.04□□□□□ -0.48
HERC2-204ENST00000563945 M0R378 163 aa12.02□□□□□ -0.49
HERC2-204ENST00000563945 ZNF625Q96I27 306 aaPredicted RBP12.02□□□□□ -0.49
HERC2-204ENST00000563945 IGLV5-39A0A0G2JS06 123 aa12.01□□□□□ -0.49
HERC2-204ENST00000563945 IGLC3P0DOY3 106 aa12.01□□□□□ -0.49
HERC2-204ENST00000563945 COX19Q49B96 90 aa12.01□□□□□ -0.49
HERC2-204ENST00000563945 C3orf22Q8N5N4 141 aa12.01□□□□□ -0.49
HERC2-204ENST00000563945 FABP9Q0Z7S8 132 aa12□□□□□ -0.49
HERC2-204ENST00000563945 LINC00337Q8N6G1 96 aa12□□□□□ -0.49
HERC2-204ENST00000563945 SFTA2Q6UW10 78 aa11.99□□□□□ -0.49
HERC2-204ENST00000563945 ZNF22P17026 224 aaPredicted RBP11.98□□□□□ -0.49
HERC2-204ENST00000563945 ZNF706Q9Y5V0 76 aaPredicted RBP11.98□□□□□ -0.49
HERC2-204ENST00000563945 MUC17Q685J3 4493 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms