RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 LINC01561Q8N1V8 128 aa5.65□□□□□ -1.5
PTPN9-203ENST00000563835 LINC00469Q8N7U9 141 aa5.65□□□□□ -1.5
PTPN9-203ENST00000563835 SCGB3A1Q96QR1 104 aa5.65□□□□□ -1.5
PTPN9-203ENST00000563835 SMIM1B2RUZ4 78 aa5.64□□□□□ -1.51
PTPN9-203ENST00000563835 NDUFC2-KCTD14E9PQ53 114 aa5.64□□□□□ -1.51
PTPN9-203ENST00000563835 M0QXV9 152 aa5.64□□□□□ -1.51
PTPN9-203ENST00000563835 PRSS2P07478 247 aa5.64□□□□□ -1.51
PTPN9-203ENST00000563835 HERVK_113P63121 156 aa5.64□□□□□ -1.51
PTPN9-203ENST00000563835 FABP9Q0Z7S8 132 aa5.64□□□□□ -1.51
PTPN9-203ENST00000563835 ERASQ7Z444 233 aa5.64□□□□□ -1.51
PTPN9-203ENST00000563835 Q8IZM0 81 aa5.64□□□□□ -1.51
PTPN9-203ENST00000563835 PACRGQ96M98 296 aaPredicted RBP5.64□□□□□ -1.51
PTPN9-203ENST00000563835 GEMIN7Q9H840 131 aaKnown RBP5.64□□□□□ -1.51
PTPN9-203ENST00000563835 A0A096LNJ9 63 aa5.63□□□□□ -1.51
PTPN9-203ENST00000563835 APOC3P02656 99 aa5.63□□□□□ -1.51
PTPN9-203ENST00000563835 CKS1BP61024 79 aa5.63□□□□□ -1.51
PTPN9-203ENST00000563835 PAPPA-AS1Q5QFB9 102 aa5.63□□□□□ -1.51
PTPN9-203ENST00000563835 REG3GQ6UW15 175 aa5.63□□□□□ -1.51
PTPN9-203ENST00000563835 FA2HQ7L5A8 372 aa5.63□□□□□ -1.51
PTPN9-203ENST00000563835 URB1-AS1Q96HZ7 61 aa5.63□□□□□ -1.51
PTPN9-203ENST00000563835 IGLV5-45A0A087WSX0 123 aa5.62□□□□□ -1.51
PTPN9-203ENST00000563835 IGLV7-43P04211 117 aa5.62□□□□□ -1.51
PTPN9-203ENST00000563835 SPINK8P0C7L1 97 aa5.62□□□□□ -1.51
PTPN9-203ENST00000563835 S100A1P23297 94 aa5.62□□□□□ -1.51
PTPN9-203ENST00000563835 G0S2P27469 103 aa5.62□□□□□ -1.51
PTPN9-203ENST00000563835 COX19Q49B96 90 aa5.62□□□□□ -1.51
PTPN9-203ENST00000563835 C6orf226Q5I0X4 101 aa5.62□□□□□ -1.51
PTPN9-203ENST00000563835 XAGE1AQ9HD64 81 aa5.62□□□□□ -1.51
PTPN9-203ENST00000563835 SMCO4Q9NRQ5 59 aa5.62□□□□□ -1.51
PTPN9-203ENST00000563835 TINCRA0A1B0GVN0 87 aa5.61□□□□□ -1.51
PTPN9-203ENST00000563835 F8VRH5 84 aa5.61□□□□□ -1.51
PTPN9-203ENST00000563835 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
PTPN9-203ENST00000563835 UBE2BP63146 152 aa5.61□□□□□ -1.51
PTPN9-203ENST00000563835 SEC11AP67812 179 aa5.61□□□□□ -1.51
PTPN9-203ENST00000563835 PMCHL1Q16048 86 aa5.61□□□□□ -1.51
PTPN9-203ENST00000563835 C18orf32Q8TCD1 76 aa5.61□□□□□ -1.51
PTPN9-203ENST00000563835 CST9LQ9H4G1 147 aa5.61□□□□□ -1.51
PTPN9-203ENST00000563835 LRP2P98164 4655 aa5.6□□□□□ -1.51
PTPN9-203ENST00000563835 PMVKQ15126 192 aa5.6□□□□□ -1.51
PTPN9-203ENST00000563835 COX7B2Q8TF08 81 aa5.6□□□□□ -1.51
PTPN9-203ENST00000563835 TRAPPC1Q9Y5R8 145 aa5.6□□□□□ -1.51
PTPN9-203ENST00000563835 H0Y9J4 135 aa5.59□□□□□ -1.51
PTPN9-203ENST00000563835 PDZD11Q5EBL8 140 aa5.59□□□□□ -1.51
PTPN9-203ENST00000563835 SNAPINO95295 136 aa5.58□□□□□ -1.52
PTPN9-203ENST00000563835 IGLC3P0DOY3 106 aa5.58□□□□□ -1.52
PTPN9-203ENST00000563835 CXCL5P42830 114 aa5.58□□□□□ -1.52
PTPN9-203ENST00000563835 NDUFA6P56556 154 aa5.58□□□□□ -1.52
PTPN9-203ENST00000563835 CBLN2Q8IUK8 224 aa5.58□□□□□ -1.52
PTPN9-203ENST00000563835 SVBPQ8N300 66 aa5.58□□□□□ -1.52
PTPN9-203ENST00000563835 YPEL4Q96NS1 127 aa5.58□□□□□ -1.52
PTPN9-203ENST00000563835 C22orf24Q9Y442 160 aa5.58□□□□□ -1.52
PTPN9-203ENST00000563835 LINC01549A6NIU2 74 aa5.57□□□□□ -1.52
PTPN9-203ENST00000563835 HBDP02042 147 aa5.57□□□□□ -1.52
PTPN9-203ENST00000563835 KRTAP1-4P0C5Y4 121 aa5.57□□□□□ -1.52
PTPN9-203ENST00000563835 LINC00614P0C842 121 aa5.57□□□□□ -1.52
PTPN9-203ENST00000563835 ZNF22P17026 224 aaPredicted RBP5.57□□□□□ -1.52
PTPN9-203ENST00000563835 PRR26Q8N8Z3 221 aa5.57□□□□□ -1.52
PTPN9-203ENST00000563835 DIRC1Q969H9 104 aa5.57□□□□□ -1.52
PTPN9-203ENST00000563835 RAB5BP61020 215 aa5.56□□□□□ -1.52
PTPN9-203ENST00000563835 IGLV5-39A0A0G2JS06 123 aa5.55□□□□□ -1.52
PTPN9-203ENST00000563835 C11orf86A6NJI1 115 aa5.55□□□□□ -1.52
PTPN9-203ENST00000563835 H3BRM9 83 aa5.55□□□□□ -1.52
PTPN9-203ENST00000563835 MRPL55Q7Z7F7 128 aaKnown RBP5.55□□□□□ -1.52
PTPN9-203ENST00000563835 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
PTPN9-203ENST00000563835 GAGE10A6NGK3 116 aa5.54□□□□□ -1.52
PTPN9-203ENST00000563835 RPL37AP8A6NKH3 93 aa5.54□□□□□ -1.52
PTPN9-203ENST00000563835 ATP5LO75964 103 aa5.53□□□□□ -1.52
PTPN9-203ENST00000563835 PFN2P35080 140 aa5.53□□□□□ -1.52
PTPN9-203ENST00000563835 BAGE3Q86Y29 109 aa5.53□□□□□ -1.52
PTPN9-203ENST00000563835 ZNF625Q96I27 306 aaPredicted RBP5.53□□□□□ -1.52
PTPN9-203ENST00000563835 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
PTPN9-203ENST00000563835 TP73-AS1Q9UF72 201 aa5.53□□□□□ -1.52
PTPN9-203ENST00000563835 NUPR1O60356 82 aa5.52□□□□□ -1.53
PTPN9-203ENST00000563835 ZNF861PO60384 105 aa5.52□□□□□ -1.53
PTPN9-203ENST00000563835 LBHQ53QV2 105 aaPredicted RBP5.52□□□□□ -1.53
PTPN9-203ENST00000563835 TMEM170BQ5T4T1 132 aa5.52□□□□□ -1.53
PTPN9-203ENST00000563835 Q8NDZ9 215 aa5.52□□□□□ -1.53
PTPN9-203ENST00000563835 LPAP08519 4548 aa5.51□□□□□ -1.53
PTPN9-203ENST00000563835 IGLV5-37A0A075B6J1 123 aa5.51□□□□□ -1.53
PTPN9-203ENST00000563835 ERG28Q9UKR5 140 aa5.51□□□□□ -1.53
PTPN9-203ENST00000563835 CHTOPQ9Y3Y2 248 aaKnown RBP5.51□□□□□ -1.53
PTPN9-203ENST00000563835 IGKV2-28A0A075B6P5 120 aa5.5□□□□□ -1.53
PTPN9-203ENST00000563835 BCE1O60756 84 aa5.5□□□□□ -1.53
PTPN9-203ENST00000563835 IGKV2D-28P01615 120 aa5.5□□□□□ -1.53
PTPN9-203ENST00000563835 LINC00310P59036 64 aa5.5□□□□□ -1.53
PTPN9-203ENST00000563835 FAM19A2Q8N3H0 131 aa5.5□□□□□ -1.53
PTPN9-203ENST00000563835 NKAPP1Q8N9T2 125 aa5.5□□□□□ -1.53
PTPN9-203ENST00000563835 IFI27L1Q96BM0 104 aa5.5□□□□□ -1.53
PTPN9-203ENST00000563835 CHCHD1Q96BP2 118 aaKnown RBP5.5□□□□□ -1.53
PTPN9-203ENST00000563835 SND1-IT1Q9HBX3 110 aa5.5□□□□□ -1.53
PTPN9-203ENST00000563835 IGLV1-50A0A075B6I6 118 aa5.49□□□□□ -1.53
PTPN9-203ENST00000563835 TMEM223A0PJW6 202 aa5.49□□□□□ -1.53
PTPN9-203ENST00000563835 COLCA2A8K830 154 aa5.49□□□□□ -1.53
PTPN9-203ENST00000563835 VPREB1P12018 145 aa5.49□□□□□ -1.53
PTPN9-203ENST00000563835 A0A087X002 238 aa5.48□□□□□ -1.53
PTPN9-203ENST00000563835 TRGC2P03986 189 aa5.48□□□□□ -1.53
PTPN9-203ENST00000563835 KRTAP13-1Q8IUC0 172 aa5.48□□□□□ -1.53
PTPN9-203ENST00000563835 TRAV12-1A0A0B4J245 112 aa5.47□□□□□ -1.53
PTPN9-203ENST00000563835 A0A0U1RRA0 63 aa5.47□□□□□ -1.53
PTPN9-203ENST00000563835 TMEM238C9JI98 176 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms