RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 IGLV4-60A0A075B6I1 120 aa7.44□□□□□ -1.22
RNF40-204ENST00000563683 FAM19A5Q7Z5A7 132 aaPredicted RBP7.44□□□□□ -1.22
RNF40-204ENST00000563683 NCR3O14931 201 aa7.43□□□□□ -1.22
RNF40-204ENST00000563683 ZANQ9Y493 2812 aa7.43□□□□□ -1.22
RNF40-204ENST00000563683 SPAG11BQ08648 103 aa7.43□□□□□ -1.22
RNF40-204ENST00000563683 UBE2DNLQ8IWF7 75 aa7.43□□□□□ -1.22
RNF40-204ENST00000563683 ORMDL1Q9P0S3 153 aa7.43□□□□□ -1.22
RNF40-204ENST00000563683 IGKV2D-24A0A075B6R9 120 aa7.42□□□□□ -1.22
RNF40-204ENST00000563683 SLPIP03973 132 aa7.42□□□□□ -1.22
RNF40-204ENST00000563683 REG3AQ06141 175 aa7.42□□□□□ -1.22
RNF40-204ENST00000563683 IGLV5-39A0A0G2JS06 123 aa7.42□□□□□ -1.22
RNF40-204ENST00000563683 TMEM258P61165 79 aa7.42□□□□□ -1.22
RNF40-204ENST00000563683 RPL18AQ02543 176 aaKnown RBP7.42□□□□□ -1.22
RNF40-204ENST00000563683 Q8N2B8 174 aa7.42□□□□□ -1.22
RNF40-204ENST00000563683 CHCHD10Q8WYQ3 142 aaPredicted RBP7.42□□□□□ -1.22
RNF40-204ENST00000563683 KLK5Q9Y337 293 aaPredicted RBP7.42□□□□□ -1.22
RNF40-204ENST00000563683 IGKV3D-7A0A0C4DH55 119 aa7.41□□□□□ -1.22
RNF40-204ENST00000563683 C2orf48Q96LS8 159 aa7.41□□□□□ -1.22
RNF40-204ENST00000563683 C14orf132Q9NPU4 83 aa7.41□□□□□ -1.22
RNF40-204ENST00000563683 LINC00959A0A1B0GUT2 108 aa7.41□□□□□ -1.22
RNF40-204ENST00000563683 hADV29S1A0JD25 119 aa7.41□□□□□ -1.22
RNF40-204ENST00000563683 HAMPP81172 84 aa7.41□□□□□ -1.22
RNF40-204ENST00000563683 NTM-AS1Q6ZSK4 140 aa7.41□□□□□ -1.22
RNF40-204ENST00000563683 CAMK2N2Q96S95 79 aa7.4□□□□□ -1.22
RNF40-204ENST00000563683 HRNRQ86YZ3 2850 aaPredicted RBP7.4□□□□□ -1.23
RNF40-204ENST00000563683 CRYBG3Q68DQ2 2970 aa7.4□□□□□ -1.23
RNF40-204ENST00000563683 IBA57-AS1B1ANH7 110 aa7.4□□□□□ -1.23
RNF40-204ENST00000563683 GHRHP01286 108 aa7.4□□□□□ -1.23
RNF40-204ENST00000563683 RPL28P46779 137 aaKnown RBP7.4□□□□□ -1.23
RNF40-204ENST00000563683 SERP2Q8N6R1 65 aa7.4□□□□□ -1.23
RNF40-204ENST00000563683 Q6JHZ5 121 aa7.39□□□□□ -1.23
RNF40-204ENST00000563683 IGHV4-28A0A0C4DH34 117 aa7.39□□□□□ -1.23
RNF40-204ENST00000563683 PSCAO43653 123 aa7.39□□□□□ -1.23
RNF40-204ENST00000563683 FSHBP01225 129 aa7.39□□□□□ -1.23
RNF40-204ENST00000563683 FHL2Q14192 279 aa7.39□□□□□ -1.23
RNF40-204ENST00000563683 SOSTDC1Q6X4U4 206 aa7.39□□□□□ -1.23
RNF40-204ENST00000563683 A0A096LNT2 108 aa7.39□□□□□ -1.23
RNF40-204ENST00000563683 LYRM9A8MSI8 78 aa7.38□□□□□ -1.23
RNF40-204ENST00000563683 C1orf43Q9BWL3 253 aa7.38□□□□□ -1.23
RNF40-204ENST00000563683 DCHS2Q6V1P9 2916 aa7.38□□□□□ -1.23
RNF40-204ENST00000563683 HIGD2BQ4VC39 106 aa7.38□□□□□ -1.23
RNF40-204ENST00000563683 FAM218AQ96MZ4 157 aa7.38□□□□□ -1.23
RNF40-204ENST00000563683 UBL5Q9BZL1 73 aa7.38□□□□□ -1.23
RNF40-204ENST00000563683 CCL18P55774 89 aa7.38□□□□□ -1.23
RNF40-204ENST00000563683 FAM19A3Q7Z5A8 133 aa7.37□□□□□ -1.23
RNF40-204ENST00000563683 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.37□□□□□ -1.23
RNF40-204ENST00000563683 SMIM11BQ8TCY0 68 aa7.37□□□□□ -1.23
RNF40-204ENST00000563683 XAGE1AQ9HD64 81 aa7.37□□□□□ -1.23
RNF40-204ENST00000563683 NBEAL2Q6ZNJ1 2754 aa7.37□□□□□ -1.23
RNF40-204ENST00000563683 NKAPP1Q8N9T2 125 aa7.37□□□□□ -1.23
RNF40-204ENST00000563683 C22orf24Q9Y442 160 aa7.37□□□□□ -1.23
RNF40-204ENST00000563683 GCN1Q92616 2671 aaKnown RBP7.36□□□□□ -1.23
RNF40-204ENST00000563683 DSCR8Q96T75 97 aa7.36□□□□□ -1.23
RNF40-204ENST00000563683 PRR3P79522 188 aaKnown RBP7.35□□□□□ -1.23
RNF40-204ENST00000563683 C9orf116Q5BN46 136 aaPredicted RBP7.35□□□□□ -1.23
RNF40-204ENST00000563683 OXLD1Q5BKU9 147 aa7.35□□□□□ -1.23
RNF40-204ENST00000563683 WIPF1O43516 503 aa7.34□□□□□ -1.23
RNF40-204ENST00000563683 DEFB105AQ8NG35 78 aa7.34□□□□□ -1.23
RNF40-204ENST00000563683 UTP20O75691 2785 aaKnown RBP7.34□□□□□ -1.23
RNF40-204ENST00000563683 USP17L23D6RBM5 183 aa7.34□□□□□ -1.23
RNF40-204ENST00000563683 C6orf99Q4VX62 202 aa7.34□□□□□ -1.23
RNF40-204ENST00000563683 CD164L2Q6UWJ8 174 aa7.34□□□□□ -1.23
RNF40-204ENST00000563683 C16orf95Q9H693 158 aa7.34□□□□□ -1.23
RNF40-204ENST00000563683 A0A087WZ39 114 aa7.33□□□□□ -1.24
RNF40-204ENST00000563683 MIFP14174 115 aa7.33□□□□□ -1.24
RNF40-204ENST00000563683 CSMD1Q96PZ7 3565 aa7.33□□□□□ -1.24
RNF40-204ENST00000563683 LINC00846Q9NV44 126 aa7.32□□□□□ -1.24
RNF40-204ENST00000563683 KIR2DL5BQ8NHK3 375 aa7.32□□□□□ -1.24
RNF40-204ENST00000563683 IGHV4-30-4P0DP06 118 aa7.32□□□□□ -1.24
RNF40-204ENST00000563683 OBSCN-AS1Q96MR7 158 aa7.32□□□□□ -1.24
RNF40-204ENST00000563683 MGAM2Q2M2H8 2515 aa7.31□□□□□ -1.24
RNF40-204ENST00000563683 A0A087WYN8 130 aa7.31□□□□□ -1.24
RNF40-204ENST00000563683 LINC00337Q8N6G1 96 aa7.31□□□□□ -1.24
RNF40-204ENST00000563683 A8MTW9 85 aa7.31□□□□□ -1.24
RNF40-204ENST00000563683 ATP5EP2Q5VTU8 51 aa7.31□□□□□ -1.24
RNF40-204ENST00000563683 TMEM256-PLSCR3K7ERE1 68 aa7.31□□□□□ -1.24
RNF40-204ENST00000563683 UPK3BQ9BT76 320 aa7.31□□□□□ -1.24
RNF40-204ENST00000563683 TEP1Q99973 2627 aaKnown RBP7.31□□□□□ -1.24
RNF40-204ENST00000563683 NDUFC2-KCTD14E9PQ53 114 aa7.3□□□□□ -1.24
RNF40-204ENST00000563683 UNQ6190/PRO20217Q6UXQ8 127 aa7.3□□□□□ -1.24
RNF40-204ENST00000563683 JMJD7-PLA2G4BH0Y9G9 81 aa7.3□□□□□ -1.24
RNF40-204ENST00000563683 MAST4O15021 2626 aa7.3□□□□□ -1.24
RNF40-204ENST00000563683 NDUFC2O95298 119 aa7.3□□□□□ -1.24
RNF40-204ENST00000563683 A0A087WVE0 104 aa7.29□□□□□ -1.24
RNF40-204ENST00000563683 IGHV3OR16-9A0A0B4J2B5 98 aa7.29□□□□□ -1.24
RNF40-204ENST00000563683 RBM3P98179 157 aaKnown RBP7.29□□□□□ -1.24
RNF40-204ENST00000563683 Q8IZM0 81 aa7.29□□□□□ -1.24
RNF40-204ENST00000563683 UBR5O95071 2799 aaPredicted RBP7.29□□□□□ -1.24
RNF40-204ENST00000563683 LINC01561Q8N1V8 128 aa7.29□□□□□ -1.24
RNF40-204ENST00000563683 DIRC1Q969H9 104 aa7.29□□□□□ -1.24
RNF40-204ENST00000563683 RETNQ9HD89 108 aa7.29□□□□□ -1.24
RNF40-204ENST00000563683 SETXQ7Z333 2677 aaKnown RBP7.29□□□□□ -1.24
RNF40-204ENST00000563683 IGKV2-28A0A075B6P5 120 aa7.28□□□□□ -1.24
RNF40-204ENST00000563683 IGKV2D-28P01615 120 aa7.28□□□□□ -1.24
RNF40-204ENST00000563683 C11orf45Q8TAV5 145 aa7.28□□□□□ -1.24
RNF40-204ENST00000563683 CYSRT1A8MQ03 144 aa7.28□□□□□ -1.24
RNF40-204ENST00000563683 CCKP06307 115 aa7.28□□□□□ -1.24
RNF40-204ENST00000563683 KPRPQ5T749 579 aaPredicted RBP7.28□□□□□ -1.24
RNF40-204ENST00000563683 CYSTM1Q9H1C7 97 aa7.28□□□□□ -1.24
RNF40-204ENST00000563683 NF1P21359 2839 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms