RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 COL6A5A8TX70 2615 aa3.26□□□□□ -1.89
VPS35P1-201ENST00000563400 Q6ZQT7 251 aa3.26□□□□□ -1.89
VPS35P1-201ENST00000563400 SEC11CQ9BY50 192 aa3.26□□□□□ -1.89
VPS35P1-201ENST00000563400 MXRA5Q9NR99 2828 aa3.25□□□□□ -1.89
VPS35P1-201ENST00000563400 C16orf90A8MZG2 172 aa3.25□□□□□ -1.89
VPS35P1-201ENST00000563400 TIMM17BO60830 172 aa3.25□□□□□ -1.89
VPS35P1-201ENST00000563400 TCL1BO95988 128 aa3.25□□□□□ -1.89
VPS35P1-201ENST00000563400 IGLV7-43P04211 117 aa3.25□□□□□ -1.89
VPS35P1-201ENST00000563400 MIFP14174 115 aa3.25□□□□□ -1.89
VPS35P1-201ENST00000563400 PEA15Q15121 130 aa3.25□□□□□ -1.89
VPS35P1-201ENST00000563400 RPL7L1Q6DKI1 246 aaKnown RBP3.25□□□□□ -1.89
VPS35P1-201ENST00000563400 VPS13CQ709C8 3753 aa3.25□□□□□ -1.89
VPS35P1-201ENST00000563400 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 TRAV1-1A0A0B4J248 108 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 FUSP35637 526 aaKnown RBP eCLIP3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 LYZL1Q6UWQ5 148 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 Q6ZUT4 128 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 FAM213BQ8TBF2 198 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 CHCHD1Q96BP2 118 aaKnown RBP3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 SCRT1Q9BWW7 348 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 SLC35B3Q9H1N7 401 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 ZNF469Q96JG9 3925 aaPredicted RBP3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 SORL1Q92673 2214 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 TRAV12-2A0A075B6T6 113 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 IGHV3OR16-8A0A075B7F1 116 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 TRAV21A0A0B4J279 112 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 IGHV3-53P01767 116 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 ZNF705BP0CI00 300 aaPredicted RBP3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 SPART-AS1P0CW21 52 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 FABP4P15090 132 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 GCHFRP30047 84 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 DEFA5Q01523 94 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 SS18Q15532 418 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 MRPL54Q6P161 138 aaKnown RBP3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 RETNLBQ9BQ08 111 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 GFRA4Q9GZZ7 299 aa3.24□□□□□ -1.89
VPS35P1-201ENST00000563400 ZFHX3Q15911 3703 aa3.23□□□□□ -1.89
VPS35P1-201ENST00000563400 AKAP9Q99996 3911 aa3.23□□□□□ -1.89
VPS35P1-201ENST00000563400 TRBV20-1A0A075B6N2 111 aa3.23□□□□□ -1.89
VPS35P1-201ENST00000563400 A0A0J9YX75 114 aa3.23□□□□□ -1.89
VPS35P1-201ENST00000563400 C11orf86A6NJI1 115 aa3.23□□□□□ -1.89
VPS35P1-201ENST00000563400 SPINK8P0C7L1 97 aa3.23□□□□□ -1.89
VPS35P1-201ENST00000563400 ARL14EPLP0DKL9 152 aa3.23□□□□□ -1.89
VPS35P1-201ENST00000563400 IGLC2P0DOY2 106 aa3.23□□□□□ -1.89
VPS35P1-201ENST00000563400 CLEC2BQ92478 149 aa3.23□□□□□ -1.89
VPS35P1-201ENST00000563400 AGPAT4-IT1Q9H0P7 198 aa3.23□□□□□ -1.89
VPS35P1-201ENST00000563400 MRPL36Q9P0J6 103 aaKnown RBP3.23□□□□□ -1.89
VPS35P1-201ENST00000563400 WNK1Q9H4A3 2382 aa3.23□□□□□ -1.89
VPS35P1-201ENST00000563400 TRAV7A0A075B6U4 112 aa3.22□□□□□ -1.89
VPS35P1-201ENST00000563400 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.22□□□□□ -1.89
VPS35P1-201ENST00000563400 SH2D6Q7Z4S9 175 aa3.22□□□□□ -1.89
VPS35P1-201ENST00000563400 ST20-AS1Q8NBB2 130 aa3.22□□□□□ -1.89
VPS35P1-201ENST00000563400 GNG13Q9P2W3 67 aa3.22□□□□□ -1.89
VPS35P1-201ENST00000563400 TIMM8BQ9Y5J9 83 aaPredicted RBP3.22□□□□□ -1.89
VPS35P1-201ENST00000563400 NACAE9PAV3 2078 aa3.21□□□□□ -1.9
VPS35P1-201ENST00000563400 TRBV6-1A0A0K0K1D8 114 aa3.21□□□□□ -1.9
VPS35P1-201ENST00000563400 NUPR2A6NF83 97 aa3.21□□□□□ -1.9
VPS35P1-201ENST00000563400 H3BPC8 53 aa3.21□□□□□ -1.9
VPS35P1-201ENST00000563400 IGKV3-20P01619 116 aa3.21□□□□□ -1.9
VPS35P1-201ENST00000563400 CIRBPQ14011 172 aaKnown RBP3.21□□□□□ -1.9
VPS35P1-201ENST00000563400 Q6AWC8 147 aa3.21□□□□□ -1.9
VPS35P1-201ENST00000563400 BAGE2Q86Y30 109 aa3.21□□□□□ -1.9
VPS35P1-201ENST00000563400 ATOH7Q8N100 152 aa3.21□□□□□ -1.9
VPS35P1-201ENST00000563400 Q8NAQ8 132 aa3.21□□□□□ -1.9
VPS35P1-201ENST00000563400 MED9Q9NWA0 146 aa3.21□□□□□ -1.9
VPS35P1-201ENST00000563400 IGLV4-69A0A075B6H9 119 aa3.2□□□□□ -1.9
VPS35P1-201ENST00000563400 F2Z2F3 143 aa3.2□□□□□ -1.9
VPS35P1-201ENST00000563400 K7EIL1 84 aa3.2□□□□□ -1.9
VPS35P1-201ENST00000563400 MRPS36P82909 103 aaKnown RBP3.2□□□□□ -1.9
VPS35P1-201ENST00000563400 Q5BKY6 102 aa3.2□□□□□ -1.9
VPS35P1-201ENST00000563400 C9orf153Q5TBE3 101 aa3.2□□□□□ -1.9
VPS35P1-201ENST00000563400 TMEM263Q8WUH6 116 aaKnown RBP3.2□□□□□ -1.9
VPS35P1-201ENST00000563400 LINC00467Q9BRT7 94 aa3.2□□□□□ -1.9
VPS35P1-201ENST00000563400 CYTL1Q9NRR1 136 aa3.2□□□□□ -1.9
VPS35P1-201ENST00000563400 LY96Q9Y6Y9 160 aa3.2□□□□□ -1.9
VPS35P1-201ENST00000563400 NOTCH3Q9UM47 2321 aa3.2□□□□□ -1.9
VPS35P1-201ENST00000563400 TRAV10A0A0B4J240 114 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 H3BQ15 152 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 H7C2G1 150 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 PPP1R17O96001 155 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 IFITM1P13164 125 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 HTN1P15515 57 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 LINC00322Q6ZN03 302 aaPredicted RBP3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 C15orf53Q8NAA6 179 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 FAM167A-AS1Q96KT0 104 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 STAB1Q9NY15 2570 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 TRGV2A0A075B6R0 118 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 IGKV2D-26A0A0A0MRZ7 120 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 TRBV10-2A0A0K0K1G8 114 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 GNRH2O43555 120 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 TRACP01848 142 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 ASIPP42127 132 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 SPINK13Q1W4C9 94 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 DEFB135Q30KP9 77 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 ALKAL2Q6UX46 152 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 Q6ZQT0 140 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 Q6ZR54 194 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 SBSPONQ8IVN8 264 aa3.19□□□□□ -1.9
VPS35P1-201ENST00000563400 TP53TG3Q9ULZ0 132 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms