RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 XAGE1AQ9HD64 81 aa9.55□□□□□ -0.88
SF3B3-203ENST00000562874 TRAV9-1A0A075B6T8 112 aa9.54□□□□□ -0.88
SF3B3-203ENST00000562874 C6orf226Q5I0X4 101 aa9.54□□□□□ -0.88
SF3B3-203ENST00000562874 COMMD7Q86VX2 200 aa9.54□□□□□ -0.88
SF3B3-203ENST00000562874 PRR26Q8N8Z3 221 aa9.54□□□□□ -0.88
SF3B3-203ENST00000562874 DIRC1Q969H9 104 aa9.54□□□□□ -0.88
SF3B3-203ENST00000562874 SCGB3A1Q96QR1 104 aa9.54□□□□□ -0.88
SF3B3-203ENST00000562874 H0Y9J4 135 aa9.53□□□□□ -0.88
SF3B3-203ENST00000562874 PAPPA-AS1Q5QFB9 102 aa9.53□□□□□ -0.88
SF3B3-203ENST00000562874 S100PP25815 95 aa9.52□□□□□ -0.89
SF3B3-203ENST00000562874 SEC11AP67812 179 aa9.52□□□□□ -0.89
SF3B3-203ENST00000562874 ERASQ7Z444 233 aa9.52□□□□□ -0.89
SF3B3-203ENST00000562874 SEC11CQ9BY50 192 aa9.52□□□□□ -0.89
SF3B3-203ENST00000562874 SMIM1B2RUZ4 78 aa9.51□□□□□ -0.89
SF3B3-203ENST00000562874 G0S2P27469 103 aa9.51□□□□□ -0.89
SF3B3-203ENST00000562874 F8VRH5 84 aa9.5□□□□□ -0.89
SF3B3-203ENST00000562874 GNB1LQ9BYB4 327 aa9.5□□□□□ -0.89
SF3B3-203ENST00000562874 MRPL18Q9H0U6 180 aaKnown RBP9.5□□□□□ -0.89
SF3B3-203ENST00000562874 SPINK8P0C7L1 97 aa9.49□□□□□ -0.89
SF3B3-203ENST00000562874 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
SF3B3-203ENST00000562874 FA2HQ7L5A8 372 aa9.48□□□□□ -0.89
SF3B3-203ENST00000562874 COX7B2Q8TF08 81 aa9.48□□□□□ -0.89
SF3B3-203ENST00000562874 SMCO4Q9NRQ5 59 aa9.48□□□□□ -0.89
SF3B3-203ENST00000562874 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
SF3B3-203ENST00000562874 TINCRA0A1B0GVN0 87 aa9.47□□□□□ -0.89
SF3B3-203ENST00000562874 LINC01546A6NGU7 62 aa9.47□□□□□ -0.89
SF3B3-203ENST00000562874 CXCL5P42830 114 aa9.47□□□□□ -0.89
SF3B3-203ENST00000562874 FABP9Q0Z7S8 132 aa9.47□□□□□ -0.89
SF3B3-203ENST00000562874 RPS10P5Q9NQ39 176 aa9.47□□□□□ -0.89
SF3B3-203ENST00000562874 LPAP08519 4548 aa9.46□□□□□ -0.89
SF3B3-203ENST00000562874 IGLV5-45A0A087WSX0 123 aa9.46□□□□□ -0.9
SF3B3-203ENST00000562874 CST9LQ9H4G1 147 aa9.46□□□□□ -0.9
SF3B3-203ENST00000562874 PMVKQ15126 192 aa9.45□□□□□ -0.9
SF3B3-203ENST00000562874 PDZD11Q5EBL8 140 aa9.45□□□□□ -0.9
SF3B3-203ENST00000562874 RHEBQ15382 184 aa9.44□□□□□ -0.9
SF3B3-203ENST00000562874 COX19Q49B96 90 aa9.44□□□□□ -0.9
SF3B3-203ENST00000562874 C10orf91Q5T1B1 145 aa9.44□□□□□ -0.9
SF3B3-203ENST00000562874 A0A096LNJ9 63 aa9.43□□□□□ -0.9
SF3B3-203ENST00000562874 RAB5BP61020 215 aa9.43□□□□□ -0.9
SF3B3-203ENST00000562874 MRPL55Q7Z7F7 128 aaKnown RBP9.43□□□□□ -0.9
SF3B3-203ENST00000562874 URB1-AS1Q96HZ7 61 aa9.43□□□□□ -0.9
SF3B3-203ENST00000562874 CARHSP1Q9Y2V2 147 aaKnown RBP9.43□□□□□ -0.9
SF3B3-203ENST00000562874 IGLV1-50A0A075B6I6 118 aa9.42□□□□□ -0.9
SF3B3-203ENST00000562874 GAGE10A6NGK3 116 aa9.42□□□□□ -0.9
SF3B3-203ENST00000562874 RPL37AP8A6NKH3 93 aa9.42□□□□□ -0.9
SF3B3-203ENST00000562874 NUPR1O60356 82 aa9.42□□□□□ -0.9
SF3B3-203ENST00000562874 PMCHL1Q16048 86 aa9.42□□□□□ -0.9
SF3B3-203ENST00000562874 LINC01549A6NIU2 74 aa9.41□□□□□ -0.9
SF3B3-203ENST00000562874 ZNF861PO60384 105 aa9.41□□□□□ -0.9
SF3B3-203ENST00000562874 NDUFA6P56556 154 aa9.41□□□□□ -0.9
SF3B3-203ENST00000562874 LBHQ53QV2 105 aaPredicted RBP9.41□□□□□ -0.9
SF3B3-203ENST00000562874 C18orf32Q8TCD1 76 aa9.41□□□□□ -0.9
SF3B3-203ENST00000562874 LINC00167Q96N53 147 aa9.4□□□□□ -0.9
SF3B3-203ENST00000562874 TP73-AS1Q9UF72 201 aa9.4□□□□□ -0.9
SF3B3-203ENST00000562874 TRAPPC1Q9Y5R8 145 aa9.4□□□□□ -0.9
SF3B3-203ENST00000562874 H3BRM9 83 aa9.39□□□□□ -0.91
SF3B3-203ENST00000562874 SCO1O75880 301 aa9.39□□□□□ -0.91
SF3B3-203ENST00000562874 IGLC3P0DOY3 106 aa9.39□□□□□ -0.91
SF3B3-203ENST00000562874 HBDP02042 147 aa9.38□□□□□ -0.91
SF3B3-203ENST00000562874 ZNF22P17026 224 aaPredicted RBP9.38□□□□□ -0.91
SF3B3-203ENST00000562874 BCE1O60756 84 aa9.37□□□□□ -0.91
SF3B3-203ENST00000562874 ATP5LO75964 103 aa9.37□□□□□ -0.91
SF3B3-203ENST00000562874 PFN2P35080 140 aa9.37□□□□□ -0.91
SF3B3-203ENST00000562874 APOC3P02656 99 aa9.36□□□□□ -0.91
SF3B3-203ENST00000562874 RPL13AP40429 203 aaKnown RBP9.36□□□□□ -0.91
SF3B3-203ENST00000562874 NKAPP1Q8N9T2 125 aa9.36□□□□□ -0.91
SF3B3-203ENST00000562874 RNF213Q63HN8 5207 aa9.35□□□□□ -0.91
SF3B3-203ENST00000562874 IGLV5-39A0A0G2JS06 123 aa9.35□□□□□ -0.91
SF3B3-203ENST00000562874 LINC00614P0C842 121 aa9.35□□□□□ -0.91
SF3B3-203ENST00000562874 IGLV5-37A0A075B6J1 123 aa9.34□□□□□ -0.91
SF3B3-203ENST00000562874 IGKV2-28A0A075B6P5 120 aa9.34□□□□□ -0.91
SF3B3-203ENST00000562874 A0A087X002 238 aa9.34□□□□□ -0.91
SF3B3-203ENST00000562874 C11orf86A6NJI1 115 aa9.34□□□□□ -0.91
SF3B3-203ENST00000562874 IGKV2D-28P01615 120 aa9.34□□□□□ -0.91
SF3B3-203ENST00000562874 RPL28P46779 137 aaKnown RBP9.34□□□□□ -0.91
SF3B3-203ENST00000562874 ZNF625Q96I27 306 aaPredicted RBP9.34□□□□□ -0.91
SF3B3-203ENST00000562874 BAGE3Q86Y29 109 aa9.32□□□□□ -0.92
SF3B3-203ENST00000562874 ERG28Q9UKR5 140 aa9.32□□□□□ -0.92
SF3B3-203ENST00000562874 UBE2AP49459 152 aa9.31□□□□□ -0.92
SF3B3-203ENST00000562874 PRR4Q16378 134 aa9.31□□□□□ -0.92
SF3B3-203ENST00000562874 TMEM170BQ5T4T1 132 aa9.31□□□□□ -0.92
SF3B3-203ENST00000562874 SND1-IT1Q9HBX3 110 aa9.31□□□□□ -0.92
SF3B3-203ENST00000562874 ANAPC11Q9NYG5 84 aa9.31□□□□□ -0.92
SF3B3-203ENST00000562874 SNAPINO95295 136 aa9.3□□□□□ -0.92
SF3B3-203ENST00000562874 TSPAN13O95857 204 aa9.3□□□□□ -0.92
SF3B3-203ENST00000562874 VPREB1P12018 145 aa9.3□□□□□ -0.92
SF3B3-203ENST00000562874 Q8NDZ9 215 aa9.3□□□□□ -0.92
SF3B3-203ENST00000562874 PRLHP81277 87 aa9.29□□□□□ -0.92
SF3B3-203ENST00000562874 NDUFA5Q16718 116 aa9.29□□□□□ -0.92
SF3B3-203ENST00000562874 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
SF3B3-203ENST00000562874 SVBPQ8N300 66 aa9.29□□□□□ -0.92
SF3B3-203ENST00000562874 TMEM238C9JI98 176 aa9.28□□□□□ -0.92
SF3B3-203ENST00000562874 CHTOPQ9Y3Y2 248 aaKnown RBP9.28□□□□□ -0.92
SF3B3-203ENST00000562874 TYMSOSQ8TAI1 123 aa9.27□□□□□ -0.93
SF3B3-203ENST00000562874 A0A0U1RRA0 63 aa9.26□□□□□ -0.93
SF3B3-203ENST00000562874 CRYGAP11844 174 aa9.26□□□□□ -0.93
SF3B3-203ENST00000562874 FAM19A1Q7Z5A9 133 aa9.26□□□□□ -0.93
SF3B3-203ENST00000562874 YPEL4Q96NS1 127 aa9.26□□□□□ -0.93
SF3B3-203ENST00000562874 KRTAP13-2Q52LG2 175 aa9.25□□□□□ -0.93
SF3B3-203ENST00000562874 TMEM126AQ9H061 195 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms