RNA–Protein interactions for RNA: ENST00000562271.1

LINC01225-201, Transcript of LINC01225 pseudogene, humanhuman

Gene LINC01225, Length 2,270 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-201ENST00000562271 LINC00526Q96FQ7 95 aa12.25□□□□□ -0.45
LINC01225-201ENST00000562271 FAM236AA0A1B0GUQ0 79 aa12.25□□□□□ -0.45
LINC01225-201ENST00000562271 FAM236BA0A1B0GV22 79 aa12.25□□□□□ -0.45
LINC01225-201ENST00000562271 SMIM1B2RUZ4 78 aa12.25□□□□□ -0.45
LINC01225-201ENST00000562271 SMIM9A6NGZ8 99 aa12.24□□□□□ -0.45
LINC01225-201ENST00000562271 RPS28P62857 69 aaKnown RBP12.24□□□□□ -0.45
LINC01225-201ENST00000562271 LINC00308Q8TCZ7 52 aa12.24□□□□□ -0.45
LINC01225-201ENST00000562271 LST1O00453 97 aa12.23□□□□□ -0.45
LINC01225-201ENST00000562271 CLEC2BQ92478 149 aa12.23□□□□□ -0.45
LINC01225-201ENST00000562271 NOP10Q9NPE3 64 aaKnown RBP12.23□□□□□ -0.45
LINC01225-201ENST00000562271 CDC42SE2Q9NRR3 84 aa12.23□□□□□ -0.45
LINC01225-201ENST00000562271 IGHV4-30-4P0DP06 118 aa12.23□□□□□ -0.45
LINC01225-201ENST00000562271 ZNF625Q96I27 306 aaPredicted RBP12.23□□□□□ -0.45
LINC01225-201ENST00000562271 EGFEM1PQ0D2K5 195 aa12.22□□□□□ -0.45
LINC01225-201ENST00000562271 COPS9Q8WXC6 57 aa12.22□□□□□ -0.45
LINC01225-201ENST00000562271 A0A0U1RRA0 63 aa12.21□□□□□ -0.46
LINC01225-201ENST00000562271 CMC4P56277 68 aaPredicted RBP12.21□□□□□ -0.46
LINC01225-201ENST00000562271 HUWE1Q7Z6Z7 4374 aaKnown RBP12.2□□□□□ -0.46
LINC01225-201ENST00000562271 UBE2L6O14933 153 aa12.2□□□□□ -0.46
LINC01225-201ENST00000562271 RETNQ9HD89 108 aa12.2□□□□□ -0.46
LINC01225-201ENST00000562271 LINC00643Q86TS7 51 aa12.2□□□□□ -0.46
LINC01225-201ENST00000562271 C16orf74Q96GX8 76 aa12.2□□□□□ -0.46
LINC01225-201ENST00000562271 TMEM243Q9BU79 118 aa12.2□□□□□ -0.46
LINC01225-201ENST00000562271 F5H768 121 aa12.19□□□□□ -0.46
LINC01225-201ENST00000562271 TRGV2A0A075B6R0 118 aa12.18□□□□□ -0.46
LINC01225-201ENST00000562271 FAM19A5Q7Z5A7 132 aaPredicted RBP12.18□□□□□ -0.46
LINC01225-201ENST00000562271 MRAPQ8TCY5 172 aa12.18□□□□□ -0.46
LINC01225-201ENST00000562271 DNAH9Q9NYC9 4486 aa12.17□□□□□ -0.46
LINC01225-201ENST00000562271 LOC107984640A0A0U1RRK4 108 aa12.17□□□□□ -0.46
LINC01225-201ENST00000562271 PLAC8L1A1L4L8 177 aa12.17□□□□□ -0.46
LINC01225-201ENST00000562271 K7EIL1 84 aa12.17□□□□□ -0.46
LINC01225-201ENST00000562271 CXCL5P42830 114 aa12.17□□□□□ -0.46
LINC01225-201ENST00000562271 DEFB135Q30KP9 77 aa12.17□□□□□ -0.46
LINC01225-201ENST00000562271 DEFB4AO15263 64 aa12.17□□□□□ -0.46
LINC01225-201ENST00000562271 SOSTDC1Q6X4U4 206 aa12.17□□□□□ -0.46
LINC01225-201ENST00000562271 OR13C6PQ8NH95 151 aa12.17□□□□□ -0.46
LINC01225-201ENST00000562271 TGP01266 2768 aa12.16□□□□□ -0.46
LINC01225-201ENST00000562271 SDIM1Q6ZPB5 146 aa12.16□□□□□ -0.46
LINC01225-201ENST00000562271 CRYGAP11844 174 aa12.16□□□□□ -0.46
LINC01225-201ENST00000562271 TRBV6-4A0A1B0GX49 114 aa12.15□□□□□ -0.46
LINC01225-201ENST00000562271 COX7CP15954 63 aa12.15□□□□□ -0.46
LINC01225-201ENST00000562271 COX7A2LO14548 114 aa12.14□□□□□ -0.47
LINC01225-201ENST00000562271 CSNK1G2-AS1Q8NCQ2 148 aa12.14□□□□□ -0.47
LINC01225-201ENST00000562271 STAB2Q8WWQ8 2551 aa12.14□□□□□ -0.47
LINC01225-201ENST00000562271 LOC100131303A0A0U1RQF7 123 aa12.13□□□□□ -0.47
LINC01225-201ENST00000562271 C5orf38Q86SI9 138 aa12.13□□□□□ -0.47
LINC01225-201ENST00000562271 OVOL2Q9BRP0 275 aa12.13□□□□□ -0.47
LINC01225-201ENST00000562271 TRGV4A0A0C4DH28 118 aa12.12□□□□□ -0.47
LINC01225-201ENST00000562271 GAGE2AQ6NT46 116 aa12.11□□□□□ -0.47
LINC01225-201ENST00000562271 FBN3Q75N90 2809 aa12.11□□□□□ -0.47
LINC01225-201ENST00000562271 KRTAP21-3Q3LHN1 58 aa12.1□□□□□ -0.47
LINC01225-201ENST00000562271 SMCR5Q8TEV8 140 aa12.09□□□□□ -0.47
LINC01225-201ENST00000562271 C2orf48Q96LS8 159 aa12.09□□□□□ -0.47
LINC01225-201ENST00000562271 COX7B2Q8TF08 81 aa12.09□□□□□ -0.47
LINC01225-201ENST00000562271 HIST1H4AP62805 103 aaKnown RBP12.08□□□□□ -0.48
LINC01225-201ENST00000562271 TRBV6-8A0A0A6YYG3 113 aa12.08□□□□□ -0.48
LINC01225-201ENST00000562271 ATOX1O00244 68 aa12.08□□□□□ -0.48
LINC01225-201ENST00000562271 IGKV3OR2-268A0A0C4DH90 116 aa12.07□□□□□ -0.48
LINC01225-201ENST00000562271 FHL2Q14192 279 aa12.07□□□□□ -0.48
LINC01225-201ENST00000562271 KLK5Q9Y337 293 aaPredicted RBP12.07□□□□□ -0.48
LINC01225-201ENST00000562271 KPRPQ5T749 579 aaPredicted RBP12.07□□□□□ -0.48
LINC01225-201ENST00000562271 IGLV4-60A0A075B6I1 120 aa12.06□□□□□ -0.48
LINC01225-201ENST00000562271 TRACP01848 142 aa12.06□□□□□ -0.48
LINC01225-201ENST00000562271 TOMM7Q9P0U1 55 aa12.06□□□□□ -0.48
LINC01225-201ENST00000562271 TRAV13-2A0A0B4J235 113 aa12.06□□□□□ -0.48
LINC01225-201ENST00000562271 X6R8D5 127 aa12.06□□□□□ -0.48
LINC01225-201ENST00000562271 MIR7-3HGQ8N6C7 128 aa12.05□□□□□ -0.48
LINC01225-201ENST00000562271 TMEM258P61165 79 aa12.04□□□□□ -0.48
LINC01225-201ENST00000562271 IGHV3OR16-9A0A0B4J2B5 98 aa12.04□□□□□ -0.48
LINC01225-201ENST00000562271 FAM222AQ5U5X8 452 aa12.04□□□□□ -0.48
LINC01225-201ENST00000562271 CRPP02741 224 aa12.03□□□□□ -0.48
LINC01225-201ENST00000562271 SND1-IT1Q9HBX3 110 aa12.02□□□□□ -0.49
LINC01225-201ENST00000562271 RPL28P46779 137 aaKnown RBP12.02□□□□□ -0.49
LINC01225-201ENST00000562271 A0A087WZ39 114 aa12.01□□□□□ -0.49
LINC01225-201ENST00000562271 LINC00158P58513 81 aa12.01□□□□□ -0.49
LINC01225-201ENST00000562271 FAM218AQ96MZ4 157 aa12.01□□□□□ -0.49
LINC01225-201ENST00000562271 LINC00337Q8N6G1 96 aa12□□□□□ -0.49
LINC01225-201ENST00000562271 BAALC-AS2P0C853 105 aa12□□□□□ -0.49
LINC01225-201ENST00000562271 DEFB130BP0DP73 79 aa12□□□□□ -0.49
LINC01225-201ENST00000562271 DEFB130AP0DP74 79 aa12□□□□□ -0.49
LINC01225-201ENST00000562271 DPH3Q96FX2 82 aa12□□□□□ -0.49
LINC01225-201ENST00000562271 IGKV2-28A0A075B6P5 120 aa11.99□□□□□ -0.49
LINC01225-201ENST00000562271 IGKV2D-28P01615 120 aa11.99□□□□□ -0.49
LINC01225-201ENST00000562271 INAFM2P0DMQ5 153 aa11.99□□□□□ -0.49
LINC01225-201ENST00000562271 APOC4P55056 127 aa11.99□□□□□ -0.49
LINC01225-201ENST00000562271 CELA1Q9UNI1 258 aa11.99□□□□□ -0.49
LINC01225-201ENST00000562271 CSMD3Q7Z407 3707 aa11.99□□□□□ -0.49
LINC01225-201ENST00000562271 IBA57-AS1B1ANH7 110 aa11.99□□□□□ -0.49
LINC01225-201ENST00000562271 KIR2DL5BQ8NHK3 375 aa11.99□□□□□ -0.49
LINC01225-201ENST00000562271 IGHV4-28A0A0C4DH34 117 aa11.98□□□□□ -0.49
LINC01225-201ENST00000562271 hADV29S1A0JD25 119 aa11.98□□□□□ -0.49
LINC01225-201ENST00000562271 LYSTQ99698 3801 aa11.98□□□□□ -0.49
LINC01225-201ENST00000562271 LINC00959A0A1B0GUT2 108 aa11.97□□□□□ -0.49
LINC01225-201ENST00000562271 RPL18AQ02543 176 aaKnown RBP11.97□□□□□ -0.49
LINC01225-201ENST00000562271 CCL18P55774 89 aa11.97□□□□□ -0.49
LINC01225-201ENST00000562271 LINC00612Q8N6U2 182 aa11.96□□□□□ -0.49
LINC01225-201ENST00000562271 GYPEP15421 78 aa11.95□□□□□ -0.5
LINC01225-201ENST00000562271 Q8NAQ8 132 aa11.95□□□□□ -0.5
LINC01225-201ENST00000562271 PFN2P35080 140 aa11.95□□□□□ -0.5
LINC01225-201ENST00000562271 TENM2Q9NT68 2774 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms