RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 LINC01556Q5JQF7 62 aa5.08□□□□□ -1.6
TPM1-231ENST00000561395 SCGB1D4Q6XE38 83 aa5.08□□□□□ -1.6
TPM1-231ENST00000561395 LINC01561Q8N1V8 128 aa5.08□□□□□ -1.6
TPM1-231ENST00000561395 C10orf126Q8N4M7 172 aa5.08□□□□□ -1.6
TPM1-231ENST00000561395 NDUFA12Q9UI09 145 aa5.08□□□□□ -1.6
TPM1-231ENST00000561395 KLK12Q9UKR0 248 aa5.08□□□□□ -1.6
TPM1-231ENST00000561395 DNAH17Q9UFH2 4485 aa5.07□□□□□ -1.6
TPM1-231ENST00000561395 A0A0J9YXY3 114 aa5.07□□□□□ -1.6
TPM1-231ENST00000561395 NDUFA1O15239 70 aa5.07□□□□□ -1.6
TPM1-231ENST00000561395 DNAH10OSP0CZ25 163 aa5.07□□□□□ -1.6
TPM1-231ENST00000561395 TAL2Q16559 108 aa5.07□□□□□ -1.6
TPM1-231ENST00000561395 COL5A1-AS1Q5SY13 56 aa5.07□□□□□ -1.6
TPM1-231ENST00000561395 CD164L2Q6UWJ8 174 aa5.07□□□□□ -1.6
TPM1-231ENST00000561395 ENHOQ6UWT2 76 aa5.07□□□□□ -1.6
TPM1-231ENST00000561395 C5orf38Q86SI9 138 aa5.07□□□□□ -1.6
TPM1-231ENST00000561395 CHCHD10Q8WYQ3 142 aaPredicted RBP5.07□□□□□ -1.6
TPM1-231ENST00000561395 HIST1H4GQ99525 98 aa5.07□□□□□ -1.6
TPM1-231ENST00000561395 SPANXB1Q9NS25 103 aaPredicted RBP5.07□□□□□ -1.6
TPM1-231ENST00000561395 LINC00588Q9Y4M8 146 aa5.07□□□□□ -1.6
TPM1-231ENST00000561395 DNAH11Q96DT5 4516 aa5.07□□□□□ -1.6
TPM1-231ENST00000561395 DMBT1Q9UGM3 2413 aaPredicted RBP5.06□□□□□ -1.6
TPM1-231ENST00000561395 IGLV10-54A0A075B6I4 117 aa5.06□□□□□ -1.6
TPM1-231ENST00000561395 COX7A2LO14548 114 aa5.06□□□□□ -1.6
TPM1-231ENST00000561395 CRPP02741 224 aa5.06□□□□□ -1.6
TPM1-231ENST00000561395 FOXI1Q12951 378 aa5.06□□□□□ -1.6
TPM1-231ENST00000561395 CEND1Q8N111 149 aa5.06□□□□□ -1.6
TPM1-231ENST00000561395 COX7B2Q8TF08 81 aa5.06□□□□□ -1.6
TPM1-231ENST00000561395 ORAOV1Q8WV07 137 aa5.06□□□□□ -1.6
TPM1-231ENST00000561395 ZNF625Q96I27 306 aaPredicted RBP5.06□□□□□ -1.6
TPM1-231ENST00000561395 TRAV8-4A0A0B4J246 113 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 TMEM238C9JI98 176 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 TIMM17BO60830 172 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 MALP21145 153 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 GCSHP23434 173 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 FXYD2P54710 66 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 CCL18P55774 89 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 MIAQ16674 131 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 UBE2DNLQ8IWF7 75 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 UBE2WQ96B02 151 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 LITAFQ99732 161 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 UPK3BQ9BT76 320 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 TM2D2Q9BX73 214 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 Q9H8V8 135 aa5.05□□□□□ -1.6
TPM1-231ENST00000561395 GAGE12HA6NDE8 117 aa5.04□□□□□ -1.6
TPM1-231ENST00000561395 A6NDN8 102 aa5.04□□□□□ -1.6
TPM1-231ENST00000561395 HERV-K104P63124 156 aa5.04□□□□□ -1.6
TPM1-231ENST00000561395 SRSF9Q13242 221 aaKnown RBP eCLIP5.04□□□□□ -1.6
TPM1-231ENST00000561395 Q8IZM0 81 aa5.04□□□□□ -1.6
TPM1-231ENST00000561395 SPANXDQ9BXN6 97 aa5.04□□□□□ -1.6
TPM1-231ENST00000561395 SPANXCQ9NY87 97 aa5.04□□□□□ -1.6
TPM1-231ENST00000561395 TOMM7Q9P0U1 55 aa5.04□□□□□ -1.6
TPM1-231ENST00000561395 APLNQ9ULZ1 77 aa5.04□□□□□ -1.6
TPM1-231ENST00000561395 K7EP13 123 aa5.03□□□□□ -1.6
TPM1-231ENST00000561395 KRTAP26-1Q6PEX3 210 aa5.03□□□□□ -1.6
TPM1-231ENST00000561395 SFTA2Q6UW10 78 aa5.03□□□□□ -1.6
TPM1-231ENST00000561395 TAX1BP3O14907 124 aa5.02□□□□□ -1.61
TPM1-231ENST00000561395 APOMO95445 188 aa5.02□□□□□ -1.61
TPM1-231ENST00000561395 PRSS2P07478 247 aa5.02□□□□□ -1.61
TPM1-231ENST00000561395 PTTG1IPP53801 180 aa5.02□□□□□ -1.61
TPM1-231ENST00000561395 KIAA0087Q14695 138 aa5.02□□□□□ -1.61
TPM1-231ENST00000561395 ADAMTSL4-AS1Q5T5F5 129 aa5.02□□□□□ -1.61
TPM1-231ENST00000561395 Q6ZVH6 145 aa5.02□□□□□ -1.61
TPM1-231ENST00000561395 A0A1B0GV90 55 aa5.01□□□□□ -1.61
TPM1-231ENST00000561395 A0A1B0GWB2 263 aa5.01□□□□□ -1.61
TPM1-231ENST00000561395 IBA57-AS1B1ANH7 110 aa5.01□□□□□ -1.61
TPM1-231ENST00000561395 RTL8CO15255 209 aa5.01□□□□□ -1.61
TPM1-231ENST00000561395 CXCL5P42830 114 aa5.01□□□□□ -1.61
TPM1-231ENST00000561395 CIRBPQ14011 172 aaKnown RBP5.01□□□□□ -1.61
TPM1-231ENST00000561395 C6orf226Q5I0X4 101 aa5.01□□□□□ -1.61
TPM1-231ENST00000561395 MEIG1Q5JSS6 88 aa5.01□□□□□ -1.61
TPM1-231ENST00000561395 CFAP161Q6P656 301 aa5.01□□□□□ -1.61
TPM1-231ENST00000561395 MUSTN1Q8IVN3 82 aa5.01□□□□□ -1.61
TPM1-231ENST00000561395 C1orf43Q9BWL3 253 aa5.01□□□□□ -1.61
TPM1-231ENST00000561395 NHP2Q9NX24 153 aaKnown RBP5.01□□□□□ -1.61
TPM1-231ENST00000561395 IGKV2D-24A0A075B6R9 120 aa5□□□□□ -1.61
TPM1-231ENST00000561395 K7ERJ3 54 aa5□□□□□ -1.61
TPM1-231ENST00000561395 SMIM13P0DJ93 91 aa5□□□□□ -1.61
TPM1-231ENST00000561395 IFITM1P13164 125 aa5□□□□□ -1.61
TPM1-231ENST00000561395 RPL24P83731 157 aaKnown RBP5□□□□□ -1.61
TPM1-231ENST00000561395 SPAG11BQ08648 103 aa5□□□□□ -1.61
TPM1-231ENST00000561395 Q9HAA7 133 aa5□□□□□ -1.61
TPM1-231ENST00000561395 COX11Q9Y6N1 276 aa5□□□□□ -1.61
TPM1-231ENST00000561395 CDK2AP2O75956 126 aa4.99□□□□□ -1.61
TPM1-231ENST00000561395 CKS1BP61024 79 aa4.99□□□□□ -1.61
TPM1-231ENST00000561395 C2orf82Q6UX34 121 aa4.99□□□□□ -1.61
TPM1-231ENST00000561395 DAND5Q8N907 189 aa4.99□□□□□ -1.61
TPM1-231ENST00000561395 C15orf56Q8N910 161 aa4.99□□□□□ -1.61
TPM1-231ENST00000561395 LINC00308Q8TCZ7 52 aa4.99□□□□□ -1.61
TPM1-231ENST00000561395 COPS9Q8WXC6 57 aa4.99□□□□□ -1.61
TPM1-231ENST00000561395 PPDPFQ9H3Y8 114 aa4.99□□□□□ -1.61
TPM1-231ENST00000561395 A0A0U1RRA0 63 aa4.98□□□□□ -1.61
TPM1-231ENST00000561395 A4D1N5 150 aa4.98□□□□□ -1.61
TPM1-231ENST00000561395 CFC1BP0CG36 223 aa4.98□□□□□ -1.61
TPM1-231ENST00000561395 CFC1P0CG37 223 aa4.98□□□□□ -1.61
TPM1-231ENST00000561395 NPC2P61916 151 aa4.98□□□□□ -1.61
TPM1-231ENST00000561395 C1orf134Q5TEV5 83 aa4.98□□□□□ -1.61
TPM1-231ENST00000561395 Q8N1X5 172 aa4.98□□□□□ -1.61
TPM1-231ENST00000561395 C6orf223Q8N319 242 aa4.98□□□□□ -1.61
TPM1-231ENST00000561395 RAB37Q96AX2 223 aa4.98□□□□□ -1.61
TPM1-231ENST00000561395 RMI2Q96E14 147 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms