RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TIMM17AQ99595 171 aa9.76□□□□□ -0.85
SNX1-213ENST00000561026 LINC00469Q8N7U9 141 aa9.75□□□□□ -0.85
SNX1-213ENST00000561026 TOMM6Q96B49 74 aa9.75□□□□□ -0.85
SNX1-213ENST00000561026 GEMIN7Q9H840 131 aaKnown RBP9.75□□□□□ -0.85
SNX1-213ENST00000561026 KIAA1644Q3SXP7 199 aa9.75□□□□□ -0.85
SNX1-213ENST00000561026 XAGE1AQ9HD64 81 aa9.75□□□□□ -0.85
SNX1-213ENST00000561026 C22orf24Q9Y442 160 aa9.75□□□□□ -0.85
SNX1-213ENST00000561026 F8VRH5 84 aa9.74□□□□□ -0.85
SNX1-213ENST00000561026 ERASQ7Z444 233 aa9.74□□□□□ -0.85
SNX1-213ENST00000561026 CLLU1Q5K131 121 aa9.73□□□□□ -0.85
SNX1-213ENST00000561026 LPAP08519 4548 aa9.72□□□□□ -0.85
SNX1-213ENST00000561026 ZNF861PO60384 105 aa9.72□□□□□ -0.85
SNX1-213ENST00000561026 ADCYAP1P18509 176 aa9.72□□□□□ -0.85
SNX1-213ENST00000561026 LBHQ53QV2 105 aaPredicted RBP9.72□□□□□ -0.85
SNX1-213ENST00000561026 SCGB3A1Q96QR1 104 aa9.72□□□□□ -0.85
SNX1-213ENST00000561026 TRAV9-1A0A075B6T8 112 aa9.71□□□□□ -0.86
SNX1-213ENST00000561026 CXCL5P42830 114 aa9.71□□□□□ -0.86
SNX1-213ENST00000561026 NUPR1O60356 82 aa9.7□□□□□ -0.86
SNX1-213ENST00000561026 RPL13AP40429 203 aaKnown RBP9.7□□□□□ -0.86
SNX1-213ENST00000561026 TINCRA0A1B0GVN0 87 aa9.69□□□□□ -0.86
SNX1-213ENST00000561026 TMEM218A2RU14 115 aa9.69□□□□□ -0.86
SNX1-213ENST00000561026 SMIM1B2RUZ4 78 aa9.69□□□□□ -0.86
SNX1-213ENST00000561026 UQCC3Q6UW78 93 aa9.69□□□□□ -0.86
SNX1-213ENST00000561026 TP73-AS1Q9UF72 201 aa9.69□□□□□ -0.86
SNX1-213ENST00000561026 CARHSP1Q9Y2V2 147 aaKnown RBP9.69□□□□□ -0.86
SNX1-213ENST00000561026 IGLV5-45A0A087WSX0 123 aa9.68□□□□□ -0.86
SNX1-213ENST00000561026 LINC01546A6NGU7 62 aa9.68□□□□□ -0.86
SNX1-213ENST00000561026 LINC01549A6NIU2 74 aa9.68□□□□□ -0.86
SNX1-213ENST00000561026 PDZD11Q5EBL8 140 aa9.68□□□□□ -0.86
SNX1-213ENST00000561026 MRPL55Q7Z7F7 128 aaKnown RBP9.68□□□□□ -0.86
SNX1-213ENST00000561026 GNB1LQ9BYB4 327 aa9.68□□□□□ -0.86
SNX1-213ENST00000561026 COX7B2Q8TF08 81 aa9.67□□□□□ -0.86
SNX1-213ENST00000561026 CST9LQ9H4G1 147 aa9.67□□□□□ -0.86
SNX1-213ENST00000561026 KRTAP3-3Q9BYR6 98 aa9.66□□□□□ -0.86
SNX1-213ENST00000561026 KRTAP3-2Q9BYR7 98 aa9.66□□□□□ -0.86
SNX1-213ENST00000561026 S100PP25815 95 aa9.65□□□□□ -0.86
SNX1-213ENST00000561026 BCE1O60756 84 aa9.63□□□□□ -0.87
SNX1-213ENST00000561026 RPL28P46779 137 aaKnown RBP9.63□□□□□ -0.87
SNX1-213ENST00000561026 PMVKQ15126 192 aa9.63□□□□□ -0.87
SNX1-213ENST00000561026 LINC00167Q96N53 147 aa9.63□□□□□ -0.87
SNX1-213ENST00000561026 SEC11CQ9BY50 192 aa9.63□□□□□ -0.87
SNX1-213ENST00000561026 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
SNX1-213ENST00000561026 SPINK8P0C7L1 97 aa9.63□□□□□ -0.87
SNX1-213ENST00000561026 RAB5BP61020 215 aa9.62□□□□□ -0.87
SNX1-213ENST00000561026 IFITM2Q01629 132 aa9.62□□□□□ -0.87
SNX1-213ENST00000561026 COX19Q49B96 90 aa9.62□□□□□ -0.87
SNX1-213ENST00000561026 FA2HQ7L5A8 372 aa9.62□□□□□ -0.87
SNX1-213ENST00000561026 MRPL18Q9H0U6 180 aaKnown RBP9.62□□□□□ -0.87
SNX1-213ENST00000561026 FABP9Q0Z7S8 132 aa9.61□□□□□ -0.87
SNX1-213ENST00000561026 PRR4Q16378 134 aa9.61□□□□□ -0.87
SNX1-213ENST00000561026 SMCO4Q9NRQ5 59 aa9.61□□□□□ -0.87
SNX1-213ENST00000561026 IGLV5-37A0A075B6J1 123 aa9.6□□□□□ -0.87
SNX1-213ENST00000561026 GAGE10A6NGK3 116 aa9.6□□□□□ -0.87
SNX1-213ENST00000561026 H3BRM9 83 aa9.6□□□□□ -0.87
SNX1-213ENST00000561026 A0A087X002 238 aa9.59□□□□□ -0.87
SNX1-213ENST00000561026 ATP5LO75964 103 aa9.59□□□□□ -0.87
SNX1-213ENST00000561026 IGLC3P0DOY3 106 aa9.57□□□□□ -0.88
SNX1-213ENST00000561026 CRYGAP11844 174 aa9.57□□□□□ -0.88
SNX1-213ENST00000561026 NKAPP1Q8N9T2 125 aa9.57□□□□□ -0.88
SNX1-213ENST00000561026 IGLV5-39A0A0G2JS06 123 aa9.56□□□□□ -0.88
SNX1-213ENST00000561026 TSPAN13O95857 204 aa9.56□□□□□ -0.88
SNX1-213ENST00000561026 C10orf91Q5T1B1 145 aa9.56□□□□□ -0.88
SNX1-213ENST00000561026 KRTAP13-1Q8IUC0 172 aa9.56□□□□□ -0.88
SNX1-213ENST00000561026 A0A096LNJ9 63 aa9.55□□□□□ -0.88
SNX1-213ENST00000561026 PFN2P35080 140 aa9.55□□□□□ -0.88
SNX1-213ENST00000561026 RHEBQ15382 184 aa9.55□□□□□ -0.88
SNX1-213ENST00000561026 COMMD7Q86VX2 200 aa9.55□□□□□ -0.88
SNX1-213ENST00000561026 RPS10P5Q9NQ39 176 aa9.55□□□□□ -0.88
SNX1-213ENST00000561026 NDUFA6P56556 154 aa9.54□□□□□ -0.88
SNX1-213ENST00000561026 TYMSOSQ8TAI1 123 aa9.54□□□□□ -0.88
SNX1-213ENST00000561026 MUC2Q02817 5179 aa9.54□□□□□ -0.88
SNX1-213ENST00000561026 LINC00614P0C842 121 aa9.53□□□□□ -0.88
SNX1-213ENST00000561026 ZNF22P17026 224 aaPredicted RBP9.53□□□□□ -0.88
SNX1-213ENST00000561026 UBE2AP49459 152 aa9.53□□□□□ -0.88
SNX1-213ENST00000561026 URB1-AS1Q96HZ7 61 aa9.53□□□□□ -0.88
SNX1-213ENST00000561026 ANAPC11Q9NYG5 84 aa9.53□□□□□ -0.88
SNX1-213ENST00000561026 IGKV2-28A0A075B6P5 120 aa9.52□□□□□ -0.88
SNX1-213ENST00000561026 SCO1O75880 301 aa9.52□□□□□ -0.88
SNX1-213ENST00000561026 IGKV2D-28P01615 120 aa9.52□□□□□ -0.88
SNX1-213ENST00000561026 C18orf32Q8TCD1 76 aa9.51□□□□□ -0.89
SNX1-213ENST00000561026 SND1-IT1Q9HBX3 110 aa9.51□□□□□ -0.89
SNX1-213ENST00000561026 ERG28Q9UKR5 140 aa9.51□□□□□ -0.89
SNX1-213ENST00000561026 TRAPPC1Q9Y5R8 145 aa9.51□□□□□ -0.89
SNX1-213ENST00000561026 HBDP02042 147 aa9.5□□□□□ -0.89
SNX1-213ENST00000561026 VPREB1P12018 145 aa9.5□□□□□ -0.89
SNX1-213ENST00000561026 COX17Q14061 63 aa9.5□□□□□ -0.89
SNX1-213ENST00000561026 PMCHL1Q16048 86 aa9.5□□□□□ -0.89
SNX1-213ENST00000561026 KRTAP13-2Q52LG2 175 aa9.5□□□□□ -0.89
SNX1-213ENST00000561026 FAM229BQ4G0N7 80 aa9.49□□□□□ -0.89
SNX1-213ENST00000561026 BAGE3Q86Y29 109 aa9.49□□□□□ -0.89
SNX1-213ENST00000561026 ZNF625Q96I27 306 aaPredicted RBP9.49□□□□□ -0.89
SNX1-213ENST00000561026 C11orf86A6NJI1 115 aa9.48□□□□□ -0.89
SNX1-213ENST00000561026 RPL24P83731 157 aaKnown RBP9.48□□□□□ -0.89
SNX1-213ENST00000561026 TMEM238C9JI98 176 aa9.47□□□□□ -0.89
SNX1-213ENST00000561026 PRLHP81277 87 aa9.47□□□□□ -0.89
SNX1-213ENST00000561026 TMEM170BQ5T4T1 132 aa9.47□□□□□ -0.89
SNX1-213ENST00000561026 SFTA2Q6UW10 78 aa9.47□□□□□ -0.89
SNX1-213ENST00000561026 TMEM126AQ9H061 195 aa9.47□□□□□ -0.89
SNX1-213ENST00000561026 FAM19A1Q7Z5A9 133 aa9.46□□□□□ -0.9
SNX1-213ENST00000561026 Q8NDZ9 215 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms