RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 CKS1BP61024 79 aa5.76□□□□□ -1.49
SNRPA1-214ENST00000560987 UNQ6190/PRO20217Q6UXQ8 127 aa5.76□□□□□ -1.49
SNRPA1-214ENST00000560987 LINC00469Q8N7U9 141 aa5.76□□□□□ -1.49
SNRPA1-214ENST00000560987 STPG4Q8N801 248 aa5.76□□□□□ -1.49
SNRPA1-214ENST00000560987 URB1-AS1Q96HZ7 61 aa5.76□□□□□ -1.49
SNRPA1-214ENST00000560987 LINC00474Q9P2X8 69 aa5.76□□□□□ -1.49
SNRPA1-214ENST00000560987 CDKN2A-AS1Q9UH64 79 aa5.76□□□□□ -1.49
SNRPA1-214ENST00000560987 APOBP04114 4563 aaKnown RBP5.75□□□□□ -1.49
SNRPA1-214ENST00000560987 A0A096LNI7 61 aa5.75□□□□□ -1.49
SNRPA1-214ENST00000560987 TINCRA0A1B0GVN0 87 aa5.75□□□□□ -1.49
SNRPA1-214ENST00000560987 HSBP1O75506 76 aa5.75□□□□□ -1.49
SNRPA1-214ENST00000560987 ATP5LO75964 103 aa5.75□□□□□ -1.49
SNRPA1-214ENST00000560987 RPL18AQ02543 176 aaKnown RBP5.75□□□□□ -1.49
SNRPA1-214ENST00000560987 FAM19A3Q7Z5A8 133 aa5.75□□□□□ -1.49
SNRPA1-214ENST00000560987 LINC01561Q8N1V8 128 aa5.75□□□□□ -1.49
SNRPA1-214ENST00000560987 CHCHD1Q96BP2 118 aaKnown RBP5.75□□□□□ -1.49
SNRPA1-214ENST00000560987 COLCA2A8K830 154 aa5.74□□□□□ -1.49
SNRPA1-214ENST00000560987 SCO1O75880 301 aa5.74□□□□□ -1.49
SNRPA1-214ENST00000560987 C10orf25Q5T742 122 aa5.74□□□□□ -1.49
SNRPA1-214ENST00000560987 C2orf82Q6UX34 121 aa5.74□□□□□ -1.49
SNRPA1-214ENST00000560987 SPACA4Q8TDM5 124 aa5.74□□□□□ -1.49
SNRPA1-214ENST00000560987 A0A096LNJ9 63 aa5.73□□□□□ -1.49
SNRPA1-214ENST00000560987 H3BRM9 83 aa5.73□□□□□ -1.49
SNRPA1-214ENST00000560987 PTTG1IPP53801 180 aa5.73□□□□□ -1.49
SNRPA1-214ENST00000560987 RPL37AP61513 92 aaKnown RBP5.73□□□□□ -1.49
SNRPA1-214ENST00000560987 KIAA0087Q14695 138 aa5.73□□□□□ -1.49
SNRPA1-214ENST00000560987 RNF151Q2KHN1 245 aa5.73□□□□□ -1.49
SNRPA1-214ENST00000560987 PDZD11Q5EBL8 140 aa5.73□□□□□ -1.49
SNRPA1-214ENST00000560987 FAM19A2Q8N3H0 131 aa5.73□□□□□ -1.49
SNRPA1-214ENST00000560987 MRPL35Q9NZE8 188 aaKnown RBP5.73□□□□□ -1.49
SNRPA1-214ENST00000560987 SPINK8P0C7L1 97 aa5.72□□□□□ -1.49
SNRPA1-214ENST00000560987 CIRBPQ14011 172 aaKnown RBP5.72□□□□□ -1.49
SNRPA1-214ENST00000560987 GAGE2EQ4V326 116 aa5.72□□□□□ -1.49
SNRPA1-214ENST00000560987 C7orf33Q8WU49 177 aa5.72□□□□□ -1.49
SNRPA1-214ENST00000560987 IFI27L1Q96BM0 104 aa5.72□□□□□ -1.49
SNRPA1-214ENST00000560987 PLAC8Q9NZF1 115 aa5.72□□□□□ -1.49
SNRPA1-214ENST00000560987 GAGE2DQ9UEU5 116 aa5.72□□□□□ -1.49
SNRPA1-214ENST00000560987 H0Y8G0 127 aa5.71□□□□□ -1.5
SNRPA1-214ENST00000560987 C9orf116Q5BN46 136 aaPredicted RBP5.71□□□□□ -1.5
SNRPA1-214ENST00000560987 TMEM170BQ5T4T1 132 aa5.71□□□□□ -1.5
SNRPA1-214ENST00000560987 Q8IZM0 81 aa5.71□□□□□ -1.5
SNRPA1-214ENST00000560987 COX7B2Q8TF08 81 aa5.71□□□□□ -1.5
SNRPA1-214ENST00000560987 C6orf48Q9UBA6 75 aa5.71□□□□□ -1.5
SNRPA1-214ENST00000560987 CHTOPQ9Y3Y2 248 aaKnown RBP5.71□□□□□ -1.5
SNRPA1-214ENST00000560987 TRBV30A0A0K0K1B3 111 aa5.7□□□□□ -1.5
SNRPA1-214ENST00000560987 SERF1AO75920 110 aa5.7□□□□□ -1.5
SNRPA1-214ENST00000560987 FABP4P15090 132 aa5.7□□□□□ -1.5
SNRPA1-214ENST00000560987 A0A1W2PNN7 141 aa5.69□□□□□ -1.5
SNRPA1-214ENST00000560987 SMIM1B2RUZ4 78 aa5.69□□□□□ -1.5
SNRPA1-214ENST00000560987 F8VRH5 84 aa5.69□□□□□ -1.5
SNRPA1-214ENST00000560987 EIF4EBP3O60516 100 aaPredicted RBP5.69□□□□□ -1.5
SNRPA1-214ENST00000560987 LEPROTL1O95214 131 aa5.69□□□□□ -1.5
SNRPA1-214ENST00000560987 IGLC3P0DOY3 106 aa5.69□□□□□ -1.5
SNRPA1-214ENST00000560987 Q6ZRP5 223 aa5.69□□□□□ -1.5
SNRPA1-214ENST00000560987 IGLV5-45A0A087WSX0 123 aa5.68□□□□□ -1.5
SNRPA1-214ENST00000560987 TLX1NBP0CAT3 122 aa5.68□□□□□ -1.5
SNRPA1-214ENST00000560987 CXCL5P42830 114 aa5.68□□□□□ -1.5
SNRPA1-214ENST00000560987 HSPB8Q9UJY1 196 aa5.68□□□□□ -1.5
SNRPA1-214ENST00000560987 SRRM2Q9UQ35 2752 aaKnown RBP5.68□□□□□ -1.5
SNRPA1-214ENST00000560987 TRAV12-1A0A0B4J245 112 aa5.67□□□□□ -1.5
SNRPA1-214ENST00000560987 C11orf86A6NJI1 115 aa5.67□□□□□ -1.5
SNRPA1-214ENST00000560987 NDUFC2-KCTD14E9PQ53 114 aa5.67□□□□□ -1.5
SNRPA1-214ENST00000560987 NUPR1O60356 82 aa5.67□□□□□ -1.5
SNRPA1-214ENST00000560987 ZNF22P17026 224 aaPredicted RBP5.67□□□□□ -1.5
SNRPA1-214ENST00000560987 FAM19A5Q7Z5A7 132 aaPredicted RBP5.67□□□□□ -1.5
SNRPA1-214ENST00000560987 S100A1P23297 94 aa5.66□□□□□ -1.5
SNRPA1-214ENST00000560987 FAT1Q14517 4588 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 FAM168BA1KXE4 195 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 HIST1H2BKO60814 126 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 HIST1H2BJP06899 126 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 HIST1H2BOP23527 126 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 HIST1H2BBP33778 126 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 PFN2P35080 140 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 HIST1H2BDP58876 126 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 HIST1H2BCP62807 126 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 HIST2H2BEQ16778 126 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 PHF5AQ7RTV0 110 aaKnown RBP5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 HIST1H2BHQ93079 126 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 ZNF625Q96I27 306 aaPredicted RBP5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 HIST1H2BNQ99877 126 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 HIST1H2BMQ99879 126 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 MAP1LC3CQ9BXW4 147 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 XAGE1AQ9HD64 81 aa5.65□□□□□ -1.5
SNRPA1-214ENST00000560987 LINC00310P59036 64 aa5.64□□□□□ -1.51
SNRPA1-214ENST00000560987 DNAH8Q96JB1 4490 aa5.64□□□□□ -1.51
SNRPA1-214ENST00000560987 HERC1Q15751 4861 aa5.63□□□□□ -1.51
SNRPA1-214ENST00000560987 IGLV5-39A0A0G2JS06 123 aa5.63□□□□□ -1.51
SNRPA1-214ENST00000560987 TMEM223A0PJW6 202 aa5.63□□□□□ -1.51
SNRPA1-214ENST00000560987 ATP6V1G1O75348 118 aa5.63□□□□□ -1.51
SNRPA1-214ENST00000560987 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
SNRPA1-214ENST00000560987 UBE2BP63146 152 aa5.63□□□□□ -1.51
SNRPA1-214ENST00000560987 KRTAP29-1A8MX34 341 aaPredicted RBP5.62□□□□□ -1.51
SNRPA1-214ENST00000560987 M0QXV9 152 aa5.62□□□□□ -1.51
SNRPA1-214ENST00000560987 PRR3P79522 188 aaKnown RBP5.62□□□□□ -1.51
SNRPA1-214ENST00000560987 ODF1Q14990 250 aa5.62□□□□□ -1.51
SNRPA1-214ENST00000560987 C9orf129Q5T035 196 aaKnown RBP5.62□□□□□ -1.51
SNRPA1-214ENST00000560987 PMCHL2Q9BQD1 86 aa5.62□□□□□ -1.51
SNRPA1-214ENST00000560987 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms