RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 SRSF9Q13242 221 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMG20A-212ENST00000560986 CDKN2A-AS1Q9UH64 79 aa3.9□□□□□ -1.79
HMG20A-212ENST00000560986 A0A0B4J2C4 111 aa3.89□□□□□ -1.79
HMG20A-212ENST00000560986 F8WDY8 70 aa3.89□□□□□ -1.79
HMG20A-212ENST00000560986 RBX1P62877 108 aa3.89□□□□□ -1.79
HMG20A-212ENST00000560986 BATFQ16520 125 aa3.89□□□□□ -1.79
HMG20A-212ENST00000560986 C12orf74Q32Q52 190 aa3.89□□□□□ -1.79
HMG20A-212ENST00000560986 CD164L2Q6UWJ8 174 aa3.89□□□□□ -1.79
HMG20A-212ENST00000560986 GTF2H5Q6ZYL4 71 aa3.89□□□□□ -1.79
HMG20A-212ENST00000560986 C11orf45Q8TAV5 145 aa3.89□□□□□ -1.79
HMG20A-212ENST00000560986 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
HMG20A-212ENST00000560986 OPRPNQ99935 248 aaPredicted RBP3.89□□□□□ -1.79
HMG20A-212ENST00000560986 PRR34Q9NV39 138 aa3.89□□□□□ -1.79
HMG20A-212ENST00000560986 NDUFA12Q9UI09 145 aa3.89□□□□□ -1.79
HMG20A-212ENST00000560986 A0A096LPF7 62 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 TRAV10A0A0B4J240 114 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 LOC100131303A0A0U1RQF7 123 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 LINC00959A0A1B0GUT2 108 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 G3V4G9 280 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 TAX1BP3O14907 124 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 IGHV3-30P01768 117 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 IGHV3-30-5P0DP03 117 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 TCTAP57738 103 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 COX17Q14061 63 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 MIAQ16674 131 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 CEMP1Q6PRD7 247 aaPredicted RBP3.88□□□□□ -1.79
HMG20A-212ENST00000560986 Q8IZM0 81 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 CELA1Q9UNI1 258 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 NOTCH3Q9UM47 2321 aa3.88□□□□□ -1.79
HMG20A-212ENST00000560986 FBN1P35555 2871 aaKnown RBP3.87□□□□□ -1.79
HMG20A-212ENST00000560986 MAST4O15021 2626 aa3.87□□□□□ -1.79
HMG20A-212ENST00000560986 TRBV20-1A0A075B6N2 111 aa3.87□□□□□ -1.79
HMG20A-212ENST00000560986 TRAV13-1A0A0B4J241 112 aa3.87□□□□□ -1.79
HMG20A-212ENST00000560986 A0A1B0GV90 55 aa3.87□□□□□ -1.79
HMG20A-212ENST00000560986 IBA57-AS1B1ANH7 110 aa3.87□□□□□ -1.79
HMG20A-212ENST00000560986 APOMO95445 188 aa3.87□□□□□ -1.79
HMG20A-212ENST00000560986 FABP2P12104 132 aa3.87□□□□□ -1.79
HMG20A-212ENST00000560986 TSPEAR-AS2P59090 65 aa3.87□□□□□ -1.79
HMG20A-212ENST00000560986 C10orf126Q8N4M7 172 aa3.87□□□□□ -1.79
HMG20A-212ENST00000560986 ZNF625Q96I27 306 aaPredicted RBP3.87□□□□□ -1.79
HMG20A-212ENST00000560986 IGLV4-60A0A075B6I1 120 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 A0A087WYN8 130 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 DEFB131BA0A096LNP1 70 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 LOC107984156A0A0G2JMH3 177 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 TMEM262E9PQX1 116 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 FXYD2P54710 66 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 REG3AQ06141 175 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 LINC01556Q5JQF7 62 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 MEIG1Q5JSS6 88 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 LYPD5Q6UWN5 251 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 ARL17AQ8IVW1 177 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 COX7B2Q8TF08 81 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 LITAFQ99732 161 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 B9D2Q9BPU9 175 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 TTTY13Q9BZ97 58 aa3.86□□□□□ -1.79
HMG20A-212ENST00000560986 NHP2Q9NX24 153 aaKnown RBP3.86□□□□□ -1.79
HMG20A-212ENST00000560986 TRAV8-3A0A0A6YYJ7 113 aa3.85□□□□□ -1.79
HMG20A-212ENST00000560986 A0A1W2PPM0 123 aa3.85□□□□□ -1.79
HMG20A-212ENST00000560986 CYSRT1A8MQ03 144 aa3.85□□□□□ -1.79
HMG20A-212ENST00000560986 K7EIL1 84 aa3.85□□□□□ -1.79
HMG20A-212ENST00000560986 COX7A2LO14548 114 aa3.85□□□□□ -1.79
HMG20A-212ENST00000560986 SPINK8P0C7L1 97 aa3.85□□□□□ -1.79
HMG20A-212ENST00000560986 VAMP3Q15836 100 aa3.85□□□□□ -1.79
HMG20A-212ENST00000560986 Q6ZTC4 211 aa3.85□□□□□ -1.79
HMG20A-212ENST00000560986 UPK3BQ9BT76 320 aa3.85□□□□□ -1.79
HMG20A-212ENST00000560986 PRO1854Q9UHT4 67 aa3.85□□□□□ -1.79
HMG20A-212ENST00000560986 KLK5Q9Y337 293 aaPredicted RBP3.85□□□□□ -1.79
HMG20A-212ENST00000560986 COL6A5A8TX70 2615 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 IGHV3-64A0A075B6Q5 118 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 GVQW2A0A096LPI5 108 aaPredicted RBP3.84□□□□□ -1.79
HMG20A-212ENST00000560986 A0A0J9YWU9 116 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 K7EP34 96 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 DEFB4AO15263 64 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 CRPP02741 224 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 ANGP03950 147 aaKnown RBP3.84□□□□□ -1.79
HMG20A-212ENST00000560986 CFC1BP0CG36 223 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 CFC1P0CG37 223 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 DNAH10OSP0CZ25 163 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 XGP55808 180 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 COX6A2Q02221 97 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.79
HMG20A-212ENST00000560986 ADAMTSL4-AS1Q5T5F5 129 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 NOTCH2NLQ7Z3S9 236 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 DEFB104AQ8WTQ1 72 aa3.84□□□□□ -1.79
HMG20A-212ENST00000560986 ANK2Q01484 3957 aa3.84□□□□□ -1.8
HMG20A-212ENST00000560986 STAB1Q9NY15 2570 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 TRAV13-2A0A0B4J235 113 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 TRBV30A0A0K0K1B3 111 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 IGLL5B9A064 214 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 F8W1H4 67 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 M0QXV9 152 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 NDUFC2O95298 119 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 COX6CP09669 75 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 HTN3P15516 51 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 CCL18P55774 89 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 C6orf226Q5I0X4 101 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 LINC00269Q8N2A0 174 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 CHCHD10Q8WYQ3 142 aaPredicted RBP3.83□□□□□ -1.8
HMG20A-212ENST00000560986 RAB37Q96AX2 223 aa3.83□□□□□ -1.8
HMG20A-212ENST00000560986 RMI2Q96E14 147 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms