RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 A0A1B0GV90 55 aa9.16□□□□□ -0.94
PKNOX1-209ENST00000560448 XCL1P47992 114 aa9.16□□□□□ -0.94
PKNOX1-209ENST00000560448 TSPEAR-AS2P59090 65 aa9.16□□□□□ -0.94
PKNOX1-209ENST00000560448 HSD52Q0P140 79 aa9.16□□□□□ -0.94
PKNOX1-209ENST00000560448 FOXI1Q12951 378 aa9.16□□□□□ -0.94
PKNOX1-209ENST00000560448 TRAV13-1A0A0B4J241 112 aa9.15□□□□□ -0.94
PKNOX1-209ENST00000560448 LEPROTO15243 131 aa9.15□□□□□ -0.94
PKNOX1-209ENST00000560448 DYNC1H1Q14204 4646 aaKnown RBP9.15□□□□□ -0.95
PKNOX1-209ENST00000560448 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.14□□□□□ -0.95
PKNOX1-209ENST00000560448 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.14□□□□□ -0.95
PKNOX1-209ENST00000560448 IGHV1-58A0A0C4DH39 117 aa9.14□□□□□ -0.95
PKNOX1-209ENST00000560448 CNBPP62633 177 aaKnown RBP9.14□□□□□ -0.95
PKNOX1-209ENST00000560448 SEC11AP67812 179 aa9.14□□□□□ -0.95
PKNOX1-209ENST00000560448 LINC00242Q5T6M2 205 aa9.14□□□□□ -0.95
PKNOX1-209ENST00000560448 GVQW2A0A096LPI5 108 aaPredicted RBP9.14□□□□□ -0.95
PKNOX1-209ENST00000560448 ZNF815PA8K554 130 aa9.14□□□□□ -0.95
PKNOX1-209ENST00000560448 J3QQQ9 107 aa9.14□□□□□ -0.95
PKNOX1-209ENST00000560448 COX7A2LO14548 114 aa9.14□□□□□ -0.95
PKNOX1-209ENST00000560448 APOMO95445 188 aa9.14□□□□□ -0.95
PKNOX1-209ENST00000560448 MALP21145 153 aa9.13□□□□□ -0.95
PKNOX1-209ENST00000560448 COX6A2Q02221 97 aa9.13□□□□□ -0.95
PKNOX1-209ENST00000560448 TAL2Q16559 108 aa9.13□□□□□ -0.95
PKNOX1-209ENST00000560448 ORAOV1Q8WV07 137 aa9.13□□□□□ -0.95
PKNOX1-209ENST00000560448 PLEKHB2Q96CS7 222 aa9.13□□□□□ -0.95
PKNOX1-209ENST00000560448 HERVK_113P63121 156 aa9.12□□□□□ -0.95
PKNOX1-209ENST00000560448 C15orf56Q8N910 161 aa9.12□□□□□ -0.95
PKNOX1-209ENST00000560448 GEMIN7Q9H840 131 aaKnown RBP9.12□□□□□ -0.95
PKNOX1-209ENST00000560448 CDKN2A-AS1Q9UH64 79 aa9.12□□□□□ -0.95
PKNOX1-209ENST00000560448 PKIGQ9Y2B9 76 aa9.12□□□□□ -0.95
PKNOX1-209ENST00000560448 LINC00469Q8N7U9 141 aa9.11□□□□□ -0.95
PKNOX1-209ENST00000560448 C9orf163Q8N9P6 203 aa9.11□□□□□ -0.95
PKNOX1-209ENST00000560448 IGHV3OR16-9A0A0B4J2B5 98 aa9.1□□□□□ -0.95
PKNOX1-209ENST00000560448 LGALS3P17931 250 aaKnown RBP9.1□□□□□ -0.95
PKNOX1-209ENST00000560448 LINC01561Q8N1V8 128 aa9.1□□□□□ -0.95
PKNOX1-209ENST00000560448 DNAH5Q8TE73 4624 aa9.09□□□□□ -0.95
PKNOX1-209ENST00000560448 IGHV3-64A0A075B6Q5 118 aa9.09□□□□□ -0.95
PKNOX1-209ENST00000560448 F8WDY8 70 aa9.09□□□□□ -0.95
PKNOX1-209ENST00000560448 H3BRM9 83 aa9.09□□□□□ -0.95
PKNOX1-209ENST00000560448 ZNF561-AS1K7EIQ3 104 aa9.09□□□□□ -0.95
PKNOX1-209ENST00000560448 SPINK8P0C7L1 97 aa9.09□□□□□ -0.95
PKNOX1-209ENST00000560448 KRTAP10-1P60331 282 aa9.09□□□□□ -0.95
PKNOX1-209ENST00000560448 LRP1BQ9NZR2 4599 aa9.09□□□□□ -0.95
PKNOX1-209ENST00000560448 HERC2O95714 4834 aa9.09□□□□□ -0.95
PKNOX1-209ENST00000560448 IGLV5-39A0A0G2JS06 123 aa9.08□□□□□ -0.96
PKNOX1-209ENST00000560448 TAX1BP3O14907 124 aa9.08□□□□□ -0.96
PKNOX1-209ENST00000560448 Q6ZSA8 131 aa9.08□□□□□ -0.96
PKNOX1-209ENST00000560448 CEND1Q8N111 149 aa9.08□□□□□ -0.96
PKNOX1-209ENST00000560448 A0A087WZ39 114 aa9.07□□□□□ -0.96
PKNOX1-209ENST00000560448 FUSP35637 526 aaKnown RBP eCLIP9.07□□□□□ -0.96
PKNOX1-209ENST00000560448 FXYD2P54710 66 aa9.07□□□□□ -0.96
PKNOX1-209ENST00000560448 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
PKNOX1-209ENST00000560448 SPANXB1Q9NS25 103 aaPredicted RBP9.07□□□□□ -0.96
PKNOX1-209ENST00000560448 A6NDN8 102 aa9.06□□□□□ -0.96
PKNOX1-209ENST00000560448 LCE2DQ5TA82 110 aaPredicted RBP9.06□□□□□ -0.96
PKNOX1-209ENST00000560448 SCGB1D4Q6XE38 83 aa9.06□□□□□ -0.96
PKNOX1-209ENST00000560448 C2orf48Q96LS8 159 aa9.06□□□□□ -0.96
PKNOX1-209ENST00000560448 HIST1H4GQ99525 98 aa9.06□□□□□ -0.96
PKNOX1-209ENST00000560448 SMIM1B2RUZ4 78 aa9.05□□□□□ -0.96
PKNOX1-209ENST00000560448 HIGD2BQ4VC39 106 aa9.05□□□□□ -0.96
PKNOX1-209ENST00000560448 Q6ZVH6 145 aa9.05□□□□□ -0.96
PKNOX1-209ENST00000560448 C5orf38Q86SI9 138 aa9.05□□□□□ -0.96
PKNOX1-209ENST00000560448 KIAA1109Q2LD37 5005 aa9.05□□□□□ -0.96
PKNOX1-209ENST00000560448 A0A0J9YXY3 114 aa9.04□□□□□ -0.96
PKNOX1-209ENST00000560448 NDUFA12Q9UI09 145 aa9.04□□□□□ -0.96
PKNOX1-209ENST00000560448 SYCNQ0VAF6 134 aa9.03□□□□□ -0.96
PKNOX1-209ENST00000560448 SDIM1Q6ZPB5 146 aa9.03□□□□□ -0.96
PKNOX1-209ENST00000560448 CARD19Q96LW7 228 aa9.03□□□□□ -0.96
PKNOX1-209ENST00000560448 NDUFA1O15239 70 aa9.02□□□□□ -0.97
PKNOX1-209ENST00000560448 SLPIP03973 132 aa9.02□□□□□ -0.97
PKNOX1-209ENST00000560448 XGP55808 180 aa9.02□□□□□ -0.97
PKNOX1-209ENST00000560448 SPAG11BQ08648 103 aa9.02□□□□□ -0.97
PKNOX1-209ENST00000560448 RNF151Q2KHN1 245 aa9.02□□□□□ -0.97
PKNOX1-209ENST00000560448 LITAFQ99732 161 aa9.02□□□□□ -0.97
PKNOX1-209ENST00000560448 A0A1B0GWB2 263 aa9.01□□□□□ -0.97
PKNOX1-209ENST00000560448 PTTG1IPP53801 180 aa9.01□□□□□ -0.97
PKNOX1-209ENST00000560448 SRSF9Q13242 221 aaKnown RBP eCLIP9.01□□□□□ -0.97
PKNOX1-209ENST00000560448 CAMK2N2Q96S95 79 aa9.01□□□□□ -0.97
PKNOX1-209ENST00000560448 LINC00474Q9P2X8 69 aa9.01□□□□□ -0.97
PKNOX1-209ENST00000560448 SMIM13P0DJ93 91 aa9□□□□□ -0.97
PKNOX1-209ENST00000560448 CIRBPQ14011 172 aaKnown RBP9□□□□□ -0.97
PKNOX1-209ENST00000560448 RYR1P21817 5038 aa9□□□□□ -0.97
PKNOX1-209ENST00000560448 C9orf118A6NHY6 69 aa8.99□□□□□ -0.97
PKNOX1-209ENST00000560448 TIMM17BO60830 172 aa8.99□□□□□ -0.97
PKNOX1-209ENST00000560448 LINC01620Q4KN68 170 aa8.99□□□□□ -0.97
PKNOX1-209ENST00000560448 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
PKNOX1-209ENST00000560448 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
PKNOX1-209ENST00000560448 NHP2Q9NX24 153 aaKnown RBP8.99□□□□□ -0.97
PKNOX1-209ENST00000560448 TMEM238C9JI98 176 aa8.98□□□□□ -0.97
PKNOX1-209ENST00000560448 Q8IZM0 81 aa8.98□□□□□ -0.97
PKNOX1-209ENST00000560448 Q8N1X5 172 aa8.98□□□□□ -0.97
PKNOX1-209ENST00000560448 ZNF625Q96I27 306 aaPredicted RBP8.98□□□□□ -0.97
PKNOX1-209ENST00000560448 FAM30AQ9NZY2 134 aa8.98□□□□□ -0.97
PKNOX1-209ENST00000560448 APOBP04114 4563 aaKnown RBP8.98□□□□□ -0.97
PKNOX1-209ENST00000560448 K7ERJ3 54 aa8.97□□□□□ -0.97
PKNOX1-209ENST00000560448 PRSS2P07478 247 aa8.97□□□□□ -0.97
PKNOX1-209ENST00000560448 CXCL5P42830 114 aa8.97□□□□□ -0.97
PKNOX1-209ENST00000560448 ADAMTSL4-AS1Q5T5F5 129 aa8.97□□□□□ -0.97
PKNOX1-209ENST00000560448 SPANXDQ9BXN6 97 aa8.97□□□□□ -0.97
PKNOX1-209ENST00000560448 SPANXCQ9NY87 97 aa8.97□□□□□ -0.97
PKNOX1-209ENST00000560448 RAB37Q96AX2 223 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms