RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 TRBV30A0A0K0K1B3 111 aa9.46□□□□□ -0.9
SNRPA1-210ENST00000560383 A0A1W2PNN7 141 aa9.46□□□□□ -0.9
SNRPA1-210ENST00000560383 RPL18AQ02543 176 aaKnown RBP9.46□□□□□ -0.9
SNRPA1-210ENST00000560383 CBLN2Q8IUK8 224 aa9.46□□□□□ -0.9
SNRPA1-210ENST00000560383 C18orf32Q8TCD1 76 aa9.46□□□□□ -0.9
SNRPA1-210ENST00000560383 SMCO4Q9NRQ5 59 aa9.46□□□□□ -0.9
SNRPA1-210ENST00000560383 CDKN2A-AS1Q9UH64 79 aa9.46□□□□□ -0.9
SNRPA1-210ENST00000560383 TNXBP22105 4242 aa9.46□□□□□ -0.9
SNRPA1-210ENST00000560383 PRR3P79522 188 aaKnown RBP9.45□□□□□ -0.9
SNRPA1-210ENST00000560383 URB1-AS1Q96HZ7 61 aa9.45□□□□□ -0.9
SNRPA1-210ENST00000560383 CST9LQ9H4G1 147 aa9.45□□□□□ -0.9
SNRPA1-210ENST00000560383 IGLV5-45A0A087WSX0 123 aa9.44□□□□□ -0.9
SNRPA1-210ENST00000560383 A0A096LNJ9 63 aa9.44□□□□□ -0.9
SNRPA1-210ENST00000560383 TINCRA0A1B0GVN0 87 aa9.44□□□□□ -0.9
SNRPA1-210ENST00000560383 C9orf116Q5BN46 136 aaPredicted RBP9.44□□□□□ -0.9
SNRPA1-210ENST00000560383 C2orf82Q6UX34 121 aa9.44□□□□□ -0.9
SNRPA1-210ENST00000560383 Q6ZRP5 223 aa9.44□□□□□ -0.9
SNRPA1-210ENST00000560383 Q8IZM0 81 aa9.44□□□□□ -0.9
SNRPA1-210ENST00000560383 GEMIN7Q9H840 131 aaKnown RBP9.44□□□□□ -0.9
SNRPA1-210ENST00000560383 LINC00614P0C842 121 aa9.43□□□□□ -0.9
SNRPA1-210ENST00000560383 PMVKQ15126 192 aa9.42□□□□□ -0.9
SNRPA1-210ENST00000560383 NDUFC2-KCTD14E9PQ53 114 aa9.41□□□□□ -0.9
SNRPA1-210ENST00000560383 PRSS2P07478 247 aa9.41□□□□□ -0.9
SNRPA1-210ENST00000560383 C6orf226Q5I0X4 101 aa9.41□□□□□ -0.9
SNRPA1-210ENST00000560383 PACRGQ96M98 296 aaPredicted RBP9.41□□□□□ -0.9
SNRPA1-210ENST00000560383 SMIM1B2RUZ4 78 aa9.4□□□□□ -0.9
SNRPA1-210ENST00000560383 RAB5BP61020 215 aa9.4□□□□□ -0.9
SNRPA1-210ENST00000560383 LINC00469Q8N7U9 141 aa9.4□□□□□ -0.9
SNRPA1-210ENST00000560383 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.9
SNRPA1-210ENST00000560383 ATP6V1G1O75348 118 aa9.39□□□□□ -0.91
SNRPA1-210ENST00000560383 HBDP02042 147 aa9.39□□□□□ -0.91
SNRPA1-210ENST00000560383 CKS1BP61024 79 aa9.39□□□□□ -0.91
SNRPA1-210ENST00000560383 PDZD11Q5EBL8 140 aa9.39□□□□□ -0.91
SNRPA1-210ENST00000560383 SCO1O75880 301 aa9.38□□□□□ -0.91
SNRPA1-210ENST00000560383 CXCL5P42830 114 aa9.38□□□□□ -0.91
SNRPA1-210ENST00000560383 GAGE2EQ4V326 116 aa9.38□□□□□ -0.91
SNRPA1-210ENST00000560383 GAGE2DQ9UEU5 116 aa9.38□□□□□ -0.91
SNRPA1-210ENST00000560383 FAM168BA1KXE4 195 aa9.37□□□□□ -0.91
SNRPA1-210ENST00000560383 F8VRH5 84 aa9.37□□□□□ -0.91
SNRPA1-210ENST00000560383 IGLC3P0DOY3 106 aa9.37□□□□□ -0.91
SNRPA1-210ENST00000560383 S100A1P23297 94 aa9.37□□□□□ -0.91
SNRPA1-210ENST00000560383 SRSF9Q13242 221 aaKnown RBP eCLIP9.37□□□□□ -0.91
SNRPA1-210ENST00000560383 KRTAP7-1Q8IUC3 87 aa9.37□□□□□ -0.91
SNRPA1-210ENST00000560383 C9orf129Q5T035 196 aaKnown RBP9.36□□□□□ -0.91
SNRPA1-210ENST00000560383 SPINK6Q6UWN8 80 aa9.36□□□□□ -0.91
SNRPA1-210ENST00000560383 PHF5AQ7RTV0 110 aaKnown RBP9.36□□□□□ -0.91
SNRPA1-210ENST00000560383 LINC01600Q96MT4 127 aa9.36□□□□□ -0.91
SNRPA1-210ENST00000560383 ATP5LO75964 103 aa9.35□□□□□ -0.91
SNRPA1-210ENST00000560383 PMCHL1Q16048 86 aa9.35□□□□□ -0.91
SNRPA1-210ENST00000560383 CHCHD1Q96BP2 118 aaKnown RBP9.35□□□□□ -0.91
SNRPA1-210ENST00000560383 PSORS1C2Q9UIG4 136 aa9.35□□□□□ -0.91
SNRPA1-210ENST00000560383 H3BRM9 83 aa9.34□□□□□ -0.91
SNRPA1-210ENST00000560383 ODF1Q14990 250 aa9.34□□□□□ -0.91
SNRPA1-210ENST00000560383 COX7B2Q8TF08 81 aa9.34□□□□□ -0.91
SNRPA1-210ENST00000560383 IGLV5-39A0A0G2JS06 123 aa9.33□□□□□ -0.92
SNRPA1-210ENST00000560383 COLCA2A8K830 154 aa9.33□□□□□ -0.92
SNRPA1-210ENST00000560383 SPINK8P0C7L1 97 aa9.33□□□□□ -0.92
SNRPA1-210ENST00000560383 FAM19A5Q7Z5A7 132 aaPredicted RBP9.33□□□□□ -0.92
SNRPA1-210ENST00000560383 NDUFA6P56556 154 aa9.32□□□□□ -0.92
SNRPA1-210ENST00000560383 REG3GQ6UW15 175 aa9.32□□□□□ -0.92
SNRPA1-210ENST00000560383 LRP2P98164 4655 aa9.31□□□□□ -0.92
SNRPA1-210ENST00000560383 TRGC2P03986 189 aa9.31□□□□□ -0.92
SNRPA1-210ENST00000560383 ZNF22P17026 224 aaPredicted RBP9.31□□□□□ -0.92
SNRPA1-210ENST00000560383 BAGE3Q86Y29 109 aa9.31□□□□□ -0.92
SNRPA1-210ENST00000560383 KRTAP11-1Q8IUC1 163 aa9.31□□□□□ -0.92
SNRPA1-210ENST00000560383 M0QXV9 152 aa9.3□□□□□ -0.92
SNRPA1-210ENST00000560383 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
SNRPA1-210ENST00000560383 XAGE1AQ9HD64 81 aa9.29□□□□□ -0.92
SNRPA1-210ENST00000560383 C11orf86A6NJI1 115 aa9.28□□□□□ -0.92
SNRPA1-210ENST00000560383 TRAV12-1A0A0B4J245 112 aa9.27□□□□□ -0.93
SNRPA1-210ENST00000560383 KRTAP10-8P60410 259 aa9.27□□□□□ -0.93
SNRPA1-210ENST00000560383 IFI27L1Q96BM0 104 aa9.27□□□□□ -0.93
SNRPA1-210ENST00000560383 HSBP1O75506 76 aa9.26□□□□□ -0.93
SNRPA1-210ENST00000560383 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
SNRPA1-210ENST00000560383 TP73-AS1Q9UF72 201 aa9.26□□□□□ -0.93
SNRPA1-210ENST00000560383 CHTOPQ9Y3Y2 248 aaKnown RBP9.26□□□□□ -0.93
SNRPA1-210ENST00000560383 C22orf24Q9Y442 160 aa9.26□□□□□ -0.93
SNRPA1-210ENST00000560383 LINC00310P59036 64 aa9.25□□□□□ -0.93
SNRPA1-210ENST00000560383 RNF213Q63HN8 5207 aa9.24□□□□□ -0.93
SNRPA1-210ENST00000560383 UBE2BP63146 152 aa9.24□□□□□ -0.93
SNRPA1-210ENST00000560383 TMEM170BQ5T4T1 132 aa9.24□□□□□ -0.93
SNRPA1-210ENST00000560383 FAM19A2Q8N3H0 131 aa9.24□□□□□ -0.93
SNRPA1-210ENST00000560383 LBHQ53QV2 105 aaPredicted RBP9.23□□□□□ -0.93
SNRPA1-210ENST00000560383 SFTA2Q6UW10 78 aa9.23□□□□□ -0.93
SNRPA1-210ENST00000560383 IGLV5-37A0A075B6J1 123 aa9.22□□□□□ -0.93
SNRPA1-210ENST00000560383 DIRC1Q969H9 104 aa9.22□□□□□ -0.93
SNRPA1-210ENST00000560383 TMEM223A0PJW6 202 aa9.21□□□□□ -0.94
SNRPA1-210ENST00000560383 SERF1AO75920 110 aa9.21□□□□□ -0.94
SNRPA1-210ENST00000560383 COX17Q14061 63 aa9.21□□□□□ -0.94
SNRPA1-210ENST00000560383 MRPL55Q7Z7F7 128 aaKnown RBP9.21□□□□□ -0.94
SNRPA1-210ENST00000560383 ZNF625Q96I27 306 aaPredicted RBP9.21□□□□□ -0.94
SNRPA1-210ENST00000560383 ERG28Q9UKR5 140 aa9.2□□□□□ -0.94
SNRPA1-210ENST00000560383 H0Y9J4 135 aa9.19□□□□□ -0.94
SNRPA1-210ENST00000560383 NUPR1O60356 82 aa9.19□□□□□ -0.94
SNRPA1-210ENST00000560383 LEPROTL1O95214 131 aa9.19□□□□□ -0.94
SNRPA1-210ENST00000560383 PFN2P35080 140 aa9.18□□□□□ -0.94
SNRPA1-210ENST00000560383 HIST1H2BKO60814 126 aa9.17□□□□□ -0.94
SNRPA1-210ENST00000560383 HIST1H2BJP06899 126 aa9.17□□□□□ -0.94
SNRPA1-210ENST00000560383 HIST1H2BOP23527 126 aa9.17□□□□□ -0.94
SNRPA1-210ENST00000560383 HIST1H2BBP33778 126 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms