RNA–Protein interactions for RNA: ENST00000560321.5

KNSTRN-210, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-210ENST00000560321 C1orf137Q5JT78 98 aa12.21□□□□□ -0.45
KNSTRN-210ENST00000560321 C2orf82Q6UX34 121 aa12.21□□□□□ -0.45
KNSTRN-210ENST00000560321 PHF5AQ7RTV0 110 aaKnown RBP12.21□□□□□ -0.45
KNSTRN-210ENST00000560321 PSORS1C2Q9UIG4 136 aa12.21□□□□□ -0.45
KNSTRN-210ENST00000560321 MT1HL1P0DM35 61 aa12.2□□□□□ -0.46
KNSTRN-210ENST00000560321 FAM19A5Q7Z5A7 132 aaPredicted RBP12.2□□□□□ -0.46
KNSTRN-210ENST00000560321 LINC00469Q8N7U9 141 aa12.2□□□□□ -0.46
KNSTRN-210ENST00000560321 CDKN2A-AS1Q9UH64 79 aa12.2□□□□□ -0.46
KNSTRN-210ENST00000560321 LINC01546A6NGU7 62 aa12.19□□□□□ -0.46
KNSTRN-210ENST00000560321 SRSF9Q13242 221 aaKnown RBP eCLIP12.19□□□□□ -0.46
KNSTRN-210ENST00000560321 TINCRA0A1B0GVN0 87 aa12.18□□□□□ -0.46
KNSTRN-210ENST00000560321 UBE2BP63146 152 aa12.18□□□□□ -0.46
KNSTRN-210ENST00000560321 FAT3Q8TDW7 4589 aa12.17□□□□□ -0.46
KNSTRN-210ENST00000560321 F8VRH5 84 aa12.17□□□□□ -0.46
KNSTRN-210ENST00000560321 H3BRM9 83 aa12.16□□□□□ -0.46
KNSTRN-210ENST00000560321 M0QXV9 152 aa12.16□□□□□ -0.46
KNSTRN-210ENST00000560321 SNAPINO95295 136 aa12.16□□□□□ -0.46
KNSTRN-210ENST00000560321 PMVKQ15126 192 aa12.16□□□□□ -0.46
KNSTRN-210ENST00000560321 PDZD11Q5EBL8 140 aa12.16□□□□□ -0.46
KNSTRN-210ENST00000560321 SVBPQ8N300 66 aa12.16□□□□□ -0.46
KNSTRN-210ENST00000560321 TRAPPC1Q9Y5R8 145 aa12.16□□□□□ -0.46
KNSTRN-210ENST00000560321 FAM168BA1KXE4 195 aa12.15□□□□□ -0.46
KNSTRN-210ENST00000560321 DIRC1Q969H9 104 aa12.15□□□□□ -0.46
KNSTRN-210ENST00000560321 APOC3P02656 99 aa12.14□□□□□ -0.47
KNSTRN-210ENST00000560321 RAB5BP61020 215 aa12.14□□□□□ -0.47
KNSTRN-210ENST00000560321 CST9LQ9H4G1 147 aa12.14□□□□□ -0.47
KNSTRN-210ENST00000560321 IGLV7-43P04211 117 aa12.13□□□□□ -0.47
KNSTRN-210ENST00000560321 LBHQ53QV2 105 aaPredicted RBP12.12□□□□□ -0.47
KNSTRN-210ENST00000560321 COX7B2Q8TF08 81 aa12.12□□□□□ -0.47
KNSTRN-210ENST00000560321 IGLV5-45A0A087WSX0 123 aa12.11□□□□□ -0.47
KNSTRN-210ENST00000560321 LINC00614P0C842 121 aa12.11□□□□□ -0.47
KNSTRN-210ENST00000560321 SMIM1B2RUZ4 78 aa12.1□□□□□ -0.47
KNSTRN-210ENST00000560321 NDUFA6P56556 154 aa12.1□□□□□ -0.47
KNSTRN-210ENST00000560321 C9orf129Q5T035 196 aaKnown RBP12.1□□□□□ -0.47
KNSTRN-210ENST00000560321 HBDP02042 147 aa12.08□□□□□ -0.48
KNSTRN-210ENST00000560321 ODF1Q14990 250 aa12.08□□□□□ -0.48
KNSTRN-210ENST00000560321 ATP5LO75964 103 aa12.07□□□□□ -0.48
KNSTRN-210ENST00000560321 C18orf32Q8TCD1 76 aa12.07□□□□□ -0.48
KNSTRN-210ENST00000560321 XAGE1AQ9HD64 81 aa12.06□□□□□ -0.48
KNSTRN-210ENST00000560321 NUPR1O60356 82 aa12.05□□□□□ -0.48
KNSTRN-210ENST00000560321 SPINK8P0C7L1 97 aa12.05□□□□□ -0.48
KNSTRN-210ENST00000560321 KRTAP10-8P60410 259 aa12.05□□□□□ -0.48
KNSTRN-210ENST00000560321 TP73-AS1Q9UF72 201 aa12.05□□□□□ -0.48
KNSTRN-210ENST00000560321 H0Y9J4 135 aa12.04□□□□□ -0.48
KNSTRN-210ENST00000560321 IGLC3P0DOY3 106 aa12.04□□□□□ -0.48
KNSTRN-210ENST00000560321 C22orf24Q9Y442 160 aa12.04□□□□□ -0.48
KNSTRN-210ENST00000560321 SFTA2Q6UW10 78 aa12.03□□□□□ -0.48
KNSTRN-210ENST00000560321 MRPL55Q7Z7F7 128 aaKnown RBP12.02□□□□□ -0.49
KNSTRN-210ENST00000560321 KRTAP7-1Q8IUC3 87 aa12.02□□□□□ -0.49
KNSTRN-210ENST00000560321 BAGE3Q86Y29 109 aa11.99□□□□□ -0.49
KNSTRN-210ENST00000560321 NKAPP1Q8N9T2 125 aa11.99□□□□□ -0.49
KNSTRN-210ENST00000560321 IGLV1-50A0A075B6I6 118 aa11.98□□□□□ -0.49
KNSTRN-210ENST00000560321 A0A096LNJ9 63 aa11.98□□□□□ -0.49
KNSTRN-210ENST00000560321 KRTAP11-1Q8IUC1 163 aa11.98□□□□□ -0.49
KNSTRN-210ENST00000560321 CHCHD1Q96BP2 118 aaKnown RBP11.98□□□□□ -0.49
KNSTRN-210ENST00000560321 ZNF861PO60384 105 aa11.97□□□□□ -0.49
KNSTRN-210ENST00000560321 RPL13AP40429 203 aaKnown RBP11.97□□□□□ -0.49
KNSTRN-210ENST00000560321 COX17Q14061 63 aa11.97□□□□□ -0.49
KNSTRN-210ENST00000560321 PMCHL1Q16048 86 aa11.97□□□□□ -0.49
KNSTRN-210ENST00000560321 TMEM170BQ5T4T1 132 aa11.97□□□□□ -0.49
KNSTRN-210ENST00000560321 IGLV5-39A0A0G2JS06 123 aa11.96□□□□□ -0.49
KNSTRN-210ENST00000560321 ZNF22P17026 224 aaPredicted RBP11.96□□□□□ -0.49
KNSTRN-210ENST00000560321 RPL28P46779 137 aaKnown RBP11.96□□□□□ -0.49
KNSTRN-210ENST00000560321 URB1-AS1Q96HZ7 61 aa11.96□□□□□ -0.49
KNSTRN-210ENST00000560321 HMCN2Q8NDA2 5059 aa11.94□□□□□ -0.5
KNSTRN-210ENST00000560321 PFN2P35080 140 aa11.94□□□□□ -0.5
KNSTRN-210ENST00000560321 CHTOPQ9Y3Y2 248 aaKnown RBP11.94□□□□□ -0.5
KNSTRN-210ENST00000560321 BCE1O60756 84 aa11.92□□□□□ -0.5
KNSTRN-210ENST00000560321 RPL24P83731 157 aaKnown RBP11.92□□□□□ -0.5
KNSTRN-210ENST00000560321 PRR26Q8N8Z3 221 aa11.92□□□□□ -0.5
KNSTRN-210ENST00000560321 LINC00167Q96N53 147 aa11.92□□□□□ -0.5
KNSTRN-210ENST00000560321 ERG28Q9UKR5 140 aa11.92□□□□□ -0.5
KNSTRN-210ENST00000560321 IGLV5-37A0A075B6J1 123 aa11.91□□□□□ -0.5
KNSTRN-210ENST00000560321 HSBP1O75506 76 aa11.91□□□□□ -0.5
KNSTRN-210ENST00000560321 IFI27L1Q96BM0 104 aa11.91□□□□□ -0.5
KNSTRN-210ENST00000560321 TRAV12-1A0A0B4J245 112 aa11.9□□□□□ -0.5
KNSTRN-210ENST00000560321 C11orf86A6NJI1 115 aa11.9□□□□□ -0.5
KNSTRN-210ENST00000560321 RPL37AP8A6NKH3 93 aa11.9□□□□□ -0.5
KNSTRN-210ENST00000560321 TNXBP22105 4242 aa11.9□□□□□ -0.51
KNSTRN-210ENST00000560321 GAGE10A6NGK3 116 aa11.88□□□□□ -0.51
KNSTRN-210ENST00000560321 YPEL4Q96NS1 127 aa11.88□□□□□ -0.51
KNSTRN-210ENST00000560321 ATP6V1G1O75348 118 aa11.87□□□□□ -0.51
KNSTRN-210ENST00000560321 UBE2AP49459 152 aa11.87□□□□□ -0.51
KNSTRN-210ENST00000560321 ZNF625Q96I27 306 aaPredicted RBP11.86□□□□□ -0.51
KNSTRN-210ENST00000560321 SND1-IT1Q9HBX3 110 aa11.86□□□□□ -0.51
KNSTRN-210ENST00000560321 LINC00587B1AMM8 73 aa11.85□□□□□ -0.51
KNSTRN-210ENST00000560321 KRTAP1-4P0C5Y4 121 aa11.85□□□□□ -0.51
KNSTRN-210ENST00000560321 CBLN2Q8IUK8 224 aa11.85□□□□□ -0.51
KNSTRN-210ENST00000560321 LINC00158P58513 81 aa11.84□□□□□ -0.51
KNSTRN-210ENST00000560321 TMEM223A0PJW6 202 aa11.82□□□□□ -0.52
KNSTRN-210ENST00000560321 IGKV2-28A0A075B6P5 120 aa11.81□□□□□ -0.52
KNSTRN-210ENST00000560321 LEPROTL1O95214 131 aa11.81□□□□□ -0.52
KNSTRN-210ENST00000560321 IGKV2D-28P01615 120 aa11.81□□□□□ -0.52
KNSTRN-210ENST00000560321 HERV-K104P63124 156 aa11.81□□□□□ -0.52
KNSTRN-210ENST00000560321 TRGC2P03986 189 aa11.8□□□□□ -0.52
KNSTRN-210ENST00000560321 CRYGAP11844 174 aa11.8□□□□□ -0.52
KNSTRN-210ENST00000560321 VPREB1P12018 145 aa11.79□□□□□ -0.52
KNSTRN-210ENST00000560321 MEIG1Q5JSS6 88 aa11.79□□□□□ -0.52
KNSTRN-210ENST00000560321 FAM19A2Q8N3H0 131 aa11.79□□□□□ -0.52
KNSTRN-210ENST00000560321 MAP1LC3CQ9BXW4 147 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms