RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 UBE2D1P51668 147 aa7.83□□□□□ -1.16
TPM1-220ENST00000559556 C2orf82Q6UX34 121 aa7.83□□□□□ -1.16
TPM1-220ENST00000559556 LINC01561Q8N1V8 128 aa7.83□□□□□ -1.16
TPM1-220ENST00000559556 TMEM141Q96I45 108 aa7.83□□□□□ -1.16
TPM1-220ENST00000559556 RAB5BP61020 215 aa7.81□□□□□ -1.16
TPM1-220ENST00000559556 PACRGQ96M98 296 aaPredicted RBP7.81□□□□□ -1.16
TPM1-220ENST00000559556 PRELID3AQ96N28 172 aa7.81□□□□□ -1.16
TPM1-220ENST00000559556 PRR4Q16378 134 aa7.8□□□□□ -1.16
TPM1-220ENST00000559556 TEX43Q6ZNM6 134 aa7.8□□□□□ -1.16
TPM1-220ENST00000559556 PRSS47A8MTI9 375 aa7.79□□□□□ -1.16
TPM1-220ENST00000559556 ZNF861PO60384 105 aa7.79□□□□□ -1.16
TPM1-220ENST00000559556 KIAA1644Q3SXP7 199 aa7.79□□□□□ -1.16
TPM1-220ENST00000559556 LINC00173Q6ZV60 143 aa7.79□□□□□ -1.16
TPM1-220ENST00000559556 C2orf88Q9BSF0 95 aa7.79□□□□□ -1.16
TPM1-220ENST00000559556 ALKBH7Q9BT30 221 aaPredicted RBP7.79□□□□□ -1.16
TPM1-220ENST00000559556 NUPR1O60356 82 aa7.78□□□□□ -1.16
TPM1-220ENST00000559556 AMELXQ99217 191 aa7.78□□□□□ -1.16
TPM1-220ENST00000559556 MAP1LC3AQ9H492 121 aa7.78□□□□□ -1.16
TPM1-220ENST00000559556 Q6ZN92 141 aa7.77□□□□□ -1.17
TPM1-220ENST00000559556 FAM19A3Q7Z5A8 133 aa7.77□□□□□ -1.17
TPM1-220ENST00000559556 Q8IZM0 81 aa7.77□□□□□ -1.17
TPM1-220ENST00000559556 CYSLTR1Q9Y271 337 aa7.77□□□□□ -1.17
TPM1-220ENST00000559556 PRSS2P07478 247 aa7.76□□□□□ -1.17
TPM1-220ENST00000559556 NPSP0C0P6 89 aa7.76□□□□□ -1.17
TPM1-220ENST00000559556 ZC2HC1BQ5TFG8 222 aa7.76□□□□□ -1.17
TPM1-220ENST00000559556 C2orf66Q6UXQ4 117 aa7.76□□□□□ -1.17
TPM1-220ENST00000559556 NXT2Q9NPJ8 142 aaKnown RBP7.76□□□□□ -1.17
TPM1-220ENST00000559556 K7EMI3 77 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 HIST1H2BKO60814 126 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 HIST1H2BJP06899 126 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 HIST1H2BOP23527 126 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 HIST1H2BBP33778 126 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 HIST1H2BDP58876 126 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 CKS1BP61024 79 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 HIST1H2BCP62807 126 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 HIST2H2BEQ16778 126 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.75□□□□□ -1.17
TPM1-220ENST00000559556 BAGE3Q86Y29 109 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 LINC00469Q8N7U9 141 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 Q8N8P6 123 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 HIST1H2BHQ93079 126 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 HIST1H2BNQ99877 126 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 HIST1H2BMQ99879 126 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 TOMM7Q9P0U1 55 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 TP73-AS1Q9UF72 201 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 C22orf24Q9Y442 160 aa7.75□□□□□ -1.17
TPM1-220ENST00000559556 A0A0U1RQV1 116 aa7.74□□□□□ -1.17
TPM1-220ENST00000559556 LOC389332A0A1B0GUA5 103 aa7.74□□□□□ -1.17
TPM1-220ENST00000559556 S100A6P06703 90 aa7.74□□□□□ -1.17
TPM1-220ENST00000559556 G0S2P27469 103 aa7.74□□□□□ -1.17
TPM1-220ENST00000559556 LBHQ53QV2 105 aaPredicted RBP7.74□□□□□ -1.17
TPM1-220ENST00000559556 C6orf226Q5I0X4 101 aa7.74□□□□□ -1.17
TPM1-220ENST00000559556 C18orf32Q8TCD1 76 aa7.74□□□□□ -1.17
TPM1-220ENST00000559556 VCX2Q9H322 139 aa7.74□□□□□ -1.17
TPM1-220ENST00000559556 XAGE1AQ9HD64 81 aa7.74□□□□□ -1.17
TPM1-220ENST00000559556 A0A087X002 238 aa7.73□□□□□ -1.17
TPM1-220ENST00000559556 IGIPA6NJ69 53 aa7.73□□□□□ -1.17
TPM1-220ENST00000559556 ORMDL2Q53FV1 153 aa7.73□□□□□ -1.17
TPM1-220ENST00000559556 FA2HQ7L5A8 372 aa7.73□□□□□ -1.17
TPM1-220ENST00000559556 CHCHD1Q96BP2 118 aaKnown RBP7.73□□□□□ -1.17
TPM1-220ENST00000559556 F8VRH5 84 aa7.72□□□□□ -1.17
TPM1-220ENST00000559556 LINC00614P0C842 121 aa7.72□□□□□ -1.17
TPM1-220ENST00000559556 RPL28P46779 137 aaKnown RBP7.72□□□□□ -1.17
TPM1-220ENST00000559556 HERVK_113P63121 156 aa7.72□□□□□ -1.17
TPM1-220ENST00000559556 COA6Q5JTJ3 125 aaKnown RBP7.72□□□□□ -1.17
TPM1-220ENST00000559556 MRPL55Q7Z7F7 128 aaKnown RBP7.72□□□□□ -1.17
TPM1-220ENST00000559556 CDKN2A-AS1Q9UH64 79 aa7.72□□□□□ -1.17
TPM1-220ENST00000559556 FAT4Q6V0I7 4981 aa7.72□□□□□ -1.17
TPM1-220ENST00000559556 MUC17Q685J3 4493 aa7.72□□□□□ -1.17
TPM1-220ENST00000559556 LINC01549A6NIU2 74 aa7.71□□□□□ -1.18
TPM1-220ENST00000559556 BCE1O60756 84 aa7.71□□□□□ -1.18
TPM1-220ENST00000559556 TSPAN13O95857 204 aa7.71□□□□□ -1.18
TPM1-220ENST00000559556 NDUFA6P56556 154 aa7.71□□□□□ -1.18
TPM1-220ENST00000559556 SEC11AP67812 179 aa7.71□□□□□ -1.18
TPM1-220ENST00000559556 CXCL5P42830 114 aa7.7□□□□□ -1.18
TPM1-220ENST00000559556 PAPPA-AS1Q5QFB9 102 aa7.7□□□□□ -1.18
TPM1-220ENST00000559556 LINC01546A6NGU7 62 aa7.69□□□□□ -1.18
TPM1-220ENST00000559556 HSBP1O75506 76 aa7.69□□□□□ -1.18
TPM1-220ENST00000559556 CRYGAP11844 174 aa7.69□□□□□ -1.18
TPM1-220ENST00000559556 TYMSOSQ8TAI1 123 aa7.69□□□□□ -1.18
TPM1-220ENST00000559556 TIMM17AQ99595 171 aa7.69□□□□□ -1.18
TPM1-220ENST00000559556 LINC00167Q96N53 147 aa7.68□□□□□ -1.18
TPM1-220ENST00000559556 GEMIN7Q9H840 131 aaKnown RBP7.68□□□□□ -1.18
TPM1-220ENST00000559556 SMIM1B2RUZ4 78 aa7.67□□□□□ -1.18
TPM1-220ENST00000559556 SERF1AO75920 110 aa7.67□□□□□ -1.18
TPM1-220ENST00000559556 KRTAP13-1Q8IUC0 172 aa7.67□□□□□ -1.18
TPM1-220ENST00000559556 TOMM6Q96B49 74 aa7.67□□□□□ -1.18
TPM1-220ENST00000559556 KRTAP9-2Q9BYQ4 174 aa7.67□□□□□ -1.18
TPM1-220ENST00000559556 TMA7Q9Y2S6 64 aaKnown RBP7.67□□□□□ -1.18
TPM1-220ENST00000559556 IGLV5-37A0A075B6J1 123 aa7.66□□□□□ -1.18
TPM1-220ENST00000559556 S100A2P29034 98 aa7.66□□□□□ -1.18
TPM1-220ENST00000559556 LCE2AQ5TA79 106 aaPredicted RBP7.66□□□□□ -1.18
TPM1-220ENST00000559556 IGLV5-45A0A087WSX0 123 aa7.65□□□□□ -1.18
TPM1-220ENST00000559556 RPL37AP8A6NKH3 93 aa7.65□□□□□ -1.18
TPM1-220ENST00000559556 HBDP02042 147 aa7.65□□□□□ -1.18
TPM1-220ENST00000559556 KRTAP13-2Q52LG2 175 aa7.65□□□□□ -1.18
TPM1-220ENST00000559556 PDZD11Q5EBL8 140 aa7.65□□□□□ -1.18
TPM1-220ENST00000559556 URB1-AS1Q96HZ7 61 aa7.65□□□□□ -1.18
TPM1-220ENST00000559556 TINCRA0A1B0GVN0 87 aa7.64□□□□□ -1.19
TPM1-220ENST00000559556 C5orf52A6NGY3 159 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms