RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 MRPL18Q9H0U6 180 aaKnown RBP9.59□□□□□ -0.87
CDC42BPB-205ENST00000559245 NPYP01303 97 aa9.58□□□□□ -0.88
CDC42BPB-205ENST00000559245 LAMTOR2Q9Y2Q5 125 aa9.58□□□□□ -0.88
CDC42BPB-205ENST00000559245 TRAPPC1Q9Y5R8 145 aa9.58□□□□□ -0.88
CDC42BPB-205ENST00000559245 IGLV4-3A0A075B6K6 122 aa9.57□□□□□ -0.88
CDC42BPB-205ENST00000559245 A0A087X002 238 aa9.57□□□□□ -0.88
CDC42BPB-205ENST00000559245 PRSS47A8MTI9 375 aa9.57□□□□□ -0.88
CDC42BPB-205ENST00000559245 C22orf24Q9Y442 160 aa9.57□□□□□ -0.88
CDC42BPB-205ENST00000559245 KRTAP9-6A0A140TA67 174 aa9.56□□□□□ -0.88
CDC42BPB-205ENST00000559245 TRGC2P03986 189 aa9.56□□□□□ -0.88
CDC42BPB-205ENST00000559245 FABP9Q0Z7S8 132 aa9.56□□□□□ -0.88
CDC42BPB-205ENST00000559245 LINC01561Q8N1V8 128 aa9.56□□□□□ -0.88
CDC42BPB-205ENST00000559245 LINC00469Q8N7U9 141 aa9.56□□□□□ -0.88
CDC42BPB-205ENST00000559245 TMEM141Q96I45 108 aa9.56□□□□□ -0.88
CDC42BPB-205ENST00000559245 ALKBH7Q9BT30 221 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPB-205ENST00000559245 PYGO1Q9Y3Y4 419 aa9.56□□□□□ -0.88
CDC42BPB-205ENST00000559245 LBHQ53QV2 105 aaPredicted RBP9.55□□□□□ -0.88
CDC42BPB-205ENST00000559245 ORMDL3Q8N138 153 aa9.55□□□□□ -0.88
CDC42BPB-205ENST00000559245 TYMSOSQ8TAI1 123 aa9.55□□□□□ -0.88
CDC42BPB-205ENST00000559245 XAGE1AQ9HD64 81 aa9.54□□□□□ -0.88
CDC42BPB-205ENST00000559245 PRSS2P07478 247 aa9.53□□□□□ -0.88
CDC42BPB-205ENST00000559245 CRYGAP11844 174 aa9.53□□□□□ -0.88
CDC42BPB-205ENST00000559245 RPL28P46779 137 aaKnown RBP9.53□□□□□ -0.88
CDC42BPB-205ENST00000559245 TEX43Q6ZNM6 134 aa9.53□□□□□ -0.88
CDC42BPB-205ENST00000559245 TOMM7Q9P0U1 55 aa9.53□□□□□ -0.88
CDC42BPB-205ENST00000559245 MUC17Q685J3 4493 aa9.52□□□□□ -0.88
CDC42BPB-205ENST00000559245 CKS1BP61024 79 aa9.52□□□□□ -0.89
CDC42BPB-205ENST00000559245 Q6ZN92 141 aa9.52□□□□□ -0.89
CDC42BPB-205ENST00000559245 PRELID3AQ96N28 172 aa9.52□□□□□ -0.89
CDC42BPB-205ENST00000559245 KIAA1644Q3SXP7 199 aa9.51□□□□□ -0.89
CDC42BPB-205ENST00000559245 C6orf226Q5I0X4 101 aa9.51□□□□□ -0.89
CDC42BPB-205ENST00000559245 ZC2HC1BQ5TFG8 222 aa9.51□□□□□ -0.89
CDC42BPB-205ENST00000559245 MRPL55Q7Z7F7 128 aaKnown RBP9.51□□□□□ -0.89
CDC42BPB-205ENST00000559245 C2orf88Q9BSF0 95 aa9.51□□□□□ -0.89
CDC42BPB-205ENST00000559245 LINC01546A6NGU7 62 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 BCE1O60756 84 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 HIST1H2BKO60814 126 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 HIST1H2BJP06899 126 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 HIST1H2BOP23527 126 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 HIST1H2BBP33778 126 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 HIST1H2BDP58876 126 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 HIST1H2BCP62807 126 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 HIST2H2BEQ16778 126 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 C18orf32Q8TCD1 76 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 HIST1H2BHQ93079 126 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 HIST1H2BNQ99877 126 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 HIST1H2BMQ99879 126 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 TP73-AS1Q9UF72 201 aa9.5□□□□□ -0.89
CDC42BPB-205ENST00000559245 COA6Q5JTJ3 125 aaKnown RBP9.49□□□□□ -0.89
CDC42BPB-205ENST00000559245 LINC00173Q6ZV60 143 aa9.49□□□□□ -0.89
CDC42BPB-205ENST00000559245 Q8IZM0 81 aa9.49□□□□□ -0.89
CDC42BPB-205ENST00000559245 RETNLBQ9BQ08 111 aa9.49□□□□□ -0.89
CDC42BPB-205ENST00000559245 ANAPC11Q9NYG5 84 aa9.49□□□□□ -0.89
CDC42BPB-205ENST00000559245 AMELXQ99217 191 aa9.48□□□□□ -0.89
CDC42BPB-205ENST00000559245 K7EMI3 77 aa9.47□□□□□ -0.89
CDC42BPB-205ENST00000559245 KRTAP13-2Q52LG2 175 aa9.47□□□□□ -0.89
CDC42BPB-205ENST00000559245 CYSLTR1Q9Y271 337 aa9.47□□□□□ -0.89
CDC42BPB-205ENST00000559245 LOC389332A0A1B0GUA5 103 aa9.46□□□□□ -0.9
CDC42BPB-205ENST00000559245 LINC00310P59036 64 aa9.46□□□□□ -0.9
CDC42BPB-205ENST00000559245 C2orf66Q6UXQ4 117 aa9.46□□□□□ -0.9
CDC42BPB-205ENST00000559245 FAM19A3Q7Z5A8 133 aa9.46□□□□□ -0.9
CDC42BPB-205ENST00000559245 URB1-AS1Q96HZ7 61 aa9.46□□□□□ -0.9
CDC42BPB-205ENST00000559245 LINC00167Q96N53 147 aa9.46□□□□□ -0.9
CDC42BPB-205ENST00000559245 CDIP1Q9H305 208 aa9.46□□□□□ -0.9
CDC42BPB-205ENST00000559245 VCX2Q9H322 139 aa9.46□□□□□ -0.9
CDC42BPB-205ENST00000559245 MAP1LC3AQ9H492 121 aa9.46□□□□□ -0.9
CDC42BPB-205ENST00000559245 RPL37AP8A6NKH3 93 aa9.45□□□□□ -0.9
CDC42BPB-205ENST00000559245 F8VRH5 84 aa9.45□□□□□ -0.9
CDC42BPB-205ENST00000559245 RAB5BP61020 215 aa9.45□□□□□ -0.9
CDC42BPB-205ENST00000559245 Q8N8P6 123 aa9.45□□□□□ -0.9
CDC42BPB-205ENST00000559245 NXT2Q9NPJ8 142 aaKnown RBP9.45□□□□□ -0.9
CDC42BPB-205ENST00000559245 TPRXLQ17RH7 258 aa9.44□□□□□ -0.9
CDC42BPB-205ENST00000559245 LINC00304Q8N9R0 145 aa9.44□□□□□ -0.9
CDC42BPB-205ENST00000559245 CDKN2A-AS1Q9UH64 79 aa9.43□□□□□ -0.9
CDC42BPB-205ENST00000559245 GAGE10A6NGK3 116 aa9.42□□□□□ -0.9
CDC42BPB-205ENST00000559245 NPSP0C0P6 89 aa9.42□□□□□ -0.9
CDC42BPB-205ENST00000559245 HERVK_113P63121 156 aa9.42□□□□□ -0.9
CDC42BPB-205ENST00000559245 FAM229BQ4G0N7 80 aa9.42□□□□□ -0.9
CDC42BPB-205ENST00000559245 KRTAP13-1Q8IUC0 172 aa9.42□□□□□ -0.9
CDC42BPB-205ENST00000559245 CHCHD1Q96BP2 118 aaKnown RBP9.42□□□□□ -0.9
CDC42BPB-205ENST00000559245 IGLV7-46A0A075B6I9 117 aa9.41□□□□□ -0.9
CDC42BPB-205ENST00000559245 IGIPA6NJ69 53 aa9.41□□□□□ -0.9
CDC42BPB-205ENST00000559245 CXCL5P42830 114 aa9.41□□□□□ -0.9
CDC42BPB-205ENST00000559245 UBE2AP49459 152 aa9.41□□□□□ -0.9
CDC42BPB-205ENST00000559245 LINC00614P0C842 121 aa9.4□□□□□ -0.9
CDC42BPB-205ENST00000559245 SEC11AP67812 179 aa9.4□□□□□ -0.9
CDC42BPB-205ENST00000559245 ORMDL2Q53FV1 153 aa9.4□□□□□ -0.9
CDC42BPB-205ENST00000559245 GEMIN7Q9H840 131 aaKnown RBP9.4□□□□□ -0.9
CDC42BPB-205ENST00000559245 A0A096LNJ9 63 aa9.39□□□□□ -0.91
CDC42BPB-205ENST00000559245 SERF1AO75920 110 aa9.39□□□□□ -0.91
CDC42BPB-205ENST00000559245 FA2HQ7L5A8 372 aa9.38□□□□□ -0.91
CDC42BPB-205ENST00000559245 IGLV5-37A0A075B6J1 123 aa9.37□□□□□ -0.91
CDC42BPB-205ENST00000559245 IGKV2D-26A0A0A0MRZ7 120 aa9.37□□□□□ -0.91
CDC42BPB-205ENST00000559245 C5orf52A6NGY3 159 aa9.37□□□□□ -0.91
CDC42BPB-205ENST00000559245 LINC01549A6NIU2 74 aa9.37□□□□□ -0.91
CDC42BPB-205ENST00000559245 PAPPA-AS1Q5QFB9 102 aa9.37□□□□□ -0.91
CDC42BPB-205ENST00000559245 BAGE3Q86Y29 109 aa9.37□□□□□ -0.91
CDC42BPB-205ENST00000559245 NKAPP1Q8N9T2 125 aa9.37□□□□□ -0.91
CDC42BPB-205ENST00000559245 SMIM1B2RUZ4 78 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms