RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 CCDC168Q8NDH2 2452 aa8.48□□□□□ -1.05
CSPG4P12-201ENST00000558282 TLN1Q9Y490 2541 aaKnown RBP8.47□□□□□ -1.05
CSPG4P12-201ENST00000558282 ABCA2Q9BZC7 2435 aa8.47□□□□□ -1.05
CSPG4P12-201ENST00000558282 DNAJC9-AS1A6NH13 148 aa8.47□□□□□ -1.05
CSPG4P12-201ENST00000558282 H3BPC8 53 aa8.47□□□□□ -1.05
CSPG4P12-201ENST00000558282 LINC00337Q8N6G1 96 aa8.47□□□□□ -1.05
CSPG4P12-201ENST00000558282 FAM19A4Q96LR4 140 aa8.46□□□□□ -1.06
CSPG4P12-201ENST00000558282 PRO3102Q9H379 93 aa8.46□□□□□ -1.06
CSPG4P12-201ENST00000558282 DEFB113Q30KQ7 82 aa8.46□□□□□ -1.06
CSPG4P12-201ENST00000558282 NAV3Q8IVL0 2385 aa8.46□□□□□ -1.06
CSPG4P12-201ENST00000558282 IGLV5-39A0A0G2JS06 123 aa8.45□□□□□ -1.06
CSPG4P12-201ENST00000558282 SPAG11AQ6PDA7 123 aa8.45□□□□□ -1.06
CSPG4P12-201ENST00000558282 BBC3Q96PG8 261 aaPredicted RBP8.45□□□□□ -1.06
CSPG4P12-201ENST00000558282 ERC2-IT1O76042 136 aa8.44□□□□□ -1.06
CSPG4P12-201ENST00000558282 HCFC1P51610 2035 aa8.44□□□□□ -1.06
CSPG4P12-201ENST00000558282 OTOGLQ3ZCN5 2332 aa8.44□□□□□ -1.06
CSPG4P12-201ENST00000558282 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
CSPG4P12-201ENST00000558282 CHD9Q3L8U1 2897 aa8.44□□□□□ -1.06
CSPG4P12-201ENST00000558282 COL6A3P12111 3177 aa8.44□□□□□ -1.06
CSPG4P12-201ENST00000558282 C8orf87E5RJ46 101 aa8.44□□□□□ -1.06
CSPG4P12-201ENST00000558282 WIPF1O43516 503 aa8.44□□□□□ -1.06
CSPG4P12-201ENST00000558282 PCOTHQ58A44 107 aa8.44□□□□□ -1.06
CSPG4P12-201ENST00000558282 C1orf64Q8NEQ6 169 aa8.43□□□□□ -1.06
CSPG4P12-201ENST00000558282 IGHV4-30-4P0DP06 118 aa8.43□□□□□ -1.06
CSPG4P12-201ENST00000558282 IGHV4-31P0DP07 118 aa8.43□□□□□ -1.06
CSPG4P12-201ENST00000558282 ADORA2A-AS1P86434 159 aa8.43□□□□□ -1.06
CSPG4P12-201ENST00000558282 CYP4F30PQ9H0H9 118 aa8.43□□□□□ -1.06
CSPG4P12-201ENST00000558282 TRIOO75962 3097 aa8.43□□□□□ -1.06
CSPG4P12-201ENST00000558282 LOC100131303A0A0U1RQF7 123 aa8.43□□□□□ -1.06
CSPG4P12-201ENST00000558282 NHLRC4P0CG21 123 aaPredicted RBP8.43□□□□□ -1.06
CSPG4P12-201ENST00000558282 C11orf45Q8TAV5 145 aa8.43□□□□□ -1.06
CSPG4P12-201ENST00000558282 TLN2Q9Y4G6 2542 aa8.43□□□□□ -1.06
CSPG4P12-201ENST00000558282 EYSQ5T1H1 3165 aa8.42□□□□□ -1.06
CSPG4P12-201ENST00000558282 IGLV1-40P01703 118 aa8.42□□□□□ -1.06
CSPG4P12-201ENST00000558282 NUP210LQ5VU65 1888 aa8.42□□□□□ -1.06
CSPG4P12-201ENST00000558282 Q6YL49 198 aa8.42□□□□□ -1.06
CSPG4P12-201ENST00000558282 FHL2Q14192 279 aa8.42□□□□□ -1.06
CSPG4P12-201ENST00000558282 SPINK6Q6UWN8 80 aa8.41□□□□□ -1.06
CSPG4P12-201ENST00000558282 CEP295Q9C0D2 2601 aa8.41□□□□□ -1.06
CSPG4P12-201ENST00000558282 LOC110117498A0A087WWA1 95 aa8.41□□□□□ -1.06
CSPG4P12-201ENST00000558282 PRR3P79522 188 aaKnown RBP8.41□□□□□ -1.06
CSPG4P12-201ENST00000558282 EML5Q05BV3 1969 aa8.41□□□□□ -1.06
CSPG4P12-201ENST00000558282 IGF2RP11717 2491 aa8.41□□□□□ -1.06
CSPG4P12-201ENST00000558282 SMIM29Q86T20 159 aa8.41□□□□□ -1.06
CSPG4P12-201ENST00000558282 SPATA3Q8NHX4 192 aa8.41□□□□□ -1.06
CSPG4P12-201ENST00000558282 ATG2AQ2TAZ0 1938 aa8.41□□□□□ -1.06
CSPG4P12-201ENST00000558282 ARHGAP32A7KAX9 2087 aa8.41□□□□□ -1.06
CSPG4P12-201ENST00000558282 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.06
CSPG4P12-201ENST00000558282 KPRPQ5T749 579 aaPredicted RBP8.4□□□□□ -1.06
CSPG4P12-201ENST00000558282 WISP2O76076 250 aa8.4□□□□□ -1.06
CSPG4P12-201ENST00000558282 XIRP2A4UGR9 3374 aa8.4□□□□□ -1.06
CSPG4P12-201ENST00000558282 KIF25-AS1Q9Y6Z4 181 aa8.4□□□□□ -1.07
CSPG4P12-201ENST00000558282 A0A1B0GUV1 79 aa8.39□□□□□ -1.07
CSPG4P12-201ENST00000558282 BRI3O95415 125 aa8.38□□□□□ -1.07
CSPG4P12-201ENST00000558282 PRM2P04554 102 aa8.38□□□□□ -1.07
CSPG4P12-201ENST00000558282 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.38□□□□□ -1.07
CSPG4P12-201ENST00000558282 TP53AIP1Q9HCN2 124 aa8.38□□□□□ -1.07
CSPG4P12-201ENST00000558282 AGRNO00468 2067 aa8.38□□□□□ -1.07
CSPG4P12-201ENST00000558282 DEFB131BA0A096LNP1 70 aa8.38□□□□□ -1.07
CSPG4P12-201ENST00000558282 DOPEY1Q5JWR5 2465 aa8.38□□□□□ -1.07
CSPG4P12-201ENST00000558282 A0A1B0GU69 56 aa8.38□□□□□ -1.07
CSPG4P12-201ENST00000558282 LINC00336Q6ZUF6 198 aa8.38□□□□□ -1.07
CSPG4P12-201ENST00000558282 LINC00482Q8N8I6 264 aa8.38□□□□□ -1.07
CSPG4P12-201ENST00000558282 CHD8Q9HCK8 2581 aa8.38□□□□□ -1.07
CSPG4P12-201ENST00000558282 A0A087WSZ3 146 aa8.37□□□□□ -1.07
CSPG4P12-201ENST00000558282 Q8N2B8 174 aa8.37□□□□□ -1.07
CSPG4P12-201ENST00000558282 C9orf116Q5BN46 136 aaPredicted RBP8.37□□□□□ -1.07
CSPG4P12-201ENST00000558282 IGLV4-60A0A075B6I1 120 aa8.37□□□□□ -1.07
CSPG4P12-201ENST00000558282 IGLV5-45A0A087WSX0 123 aa8.37□□□□□ -1.07
CSPG4P12-201ENST00000558282 HIVEP3Q5T1R4 2406 aa8.36□□□□□ -1.07
CSPG4P12-201ENST00000558282 Q6ZQT0 140 aa8.36□□□□□ -1.07
CSPG4P12-201ENST00000558282 LINC00474Q9P2X8 69 aa8.36□□□□□ -1.07
CSPG4P12-201ENST00000558282 REG3GQ6UW15 175 aa8.36□□□□□ -1.07
CSPG4P12-201ENST00000558282 KLKP1Q107X0 134 aa8.36□□□□□ -1.07
CSPG4P12-201ENST00000558282 FAM218AQ96MZ4 157 aa8.35□□□□□ -1.07
CSPG4P12-201ENST00000558282 C6orf223Q8N319 242 aa8.34□□□□□ -1.07
CSPG4P12-201ENST00000558282 C2orf48Q96LS8 159 aa8.34□□□□□ -1.07
CSPG4P12-201ENST00000558282 RETNLBQ9BQ08 111 aa8.34□□□□□ -1.07
CSPG4P12-201ENST00000558282 TM2D3Q9BRN9 247 aa8.34□□□□□ -1.07
CSPG4P12-201ENST00000558282 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.07
CSPG4P12-201ENST00000558282 IGHV6-1A0A0B4J1U7 121 aa8.34□□□□□ -1.08
CSPG4P12-201ENST00000558282 ACYP2P14621 99 aa8.34□□□□□ -1.08
CSPG4P12-201ENST00000558282 PTPRSQ13332 1948 aa8.33□□□□□ -1.08
CSPG4P12-201ENST00000558282 USP9XQ93008 2570 aaPredicted RBP8.33□□□□□ -1.08
CSPG4P12-201ENST00000558282 USP9YO00507 2555 aaPredicted RBP8.33□□□□□ -1.08
CSPG4P12-201ENST00000558282 IGLV9-49A0A0B4J1Y8 123 aa8.32□□□□□ -1.08
CSPG4P12-201ENST00000558282 A0A1W2PNU3 283 aaPredicted RBP8.32□□□□□ -1.08
CSPG4P12-201ENST00000558282 FHL3Q13643 280 aa8.32□□□□□ -1.08
CSPG4P12-201ENST00000558282 C11orf72Q8NBR9 251 aa8.32□□□□□ -1.08
CSPG4P12-201ENST00000558282 C11orf71Q6IPW1 123 aa8.32□□□□□ -1.08
CSPG4P12-201ENST00000558282 Q6ZTC4 211 aa8.32□□□□□ -1.08
CSPG4P12-201ENST00000558282 SMCR5Q8TEV8 140 aa8.32□□□□□ -1.08
CSPG4P12-201ENST00000558282 ATP11AUNQ6ZP68 121 aa8.32□□□□□ -1.08
CSPG4P12-201ENST00000558282 Q9BRP9 147 aa8.32□□□□□ -1.08
CSPG4P12-201ENST00000558282 KTN1-AS1Q86SY8 53 aa8.31□□□□□ -1.08
CSPG4P12-201ENST00000558282 IL17DQ8TAD2 202 aa8.31□□□□□ -1.08
CSPG4P12-201ENST00000558282 NAV2Q8IVL1 2488 aa8.31□□□□□ -1.08
CSPG4P12-201ENST00000558282 LINC00315P59091 139 aa8.3□□□□□ -1.08
CSPG4P12-201ENST00000558282 LINC01006Q8NI28 216 aa8.3□□□□□ -1.08
CSPG4P12-201ENST00000558282 ZNF702PQ9H963 129 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms