RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 C2orf88Q9BSF0 95 aa5.45□□□□□ -1.54
SNRPA1-206ENST00000558059 ALKBH7Q9BT30 221 aaPredicted RBP5.45□□□□□ -1.54
SNRPA1-206ENST00000558059 C6orf48Q9UBA6 75 aa5.45□□□□□ -1.54
SNRPA1-206ENST00000558059 CARHSP1Q9Y2V2 147 aaKnown RBP5.45□□□□□ -1.54
SNRPA1-206ENST00000558059 HMCN2Q8NDA2 5059 aa5.45□□□□□ -1.54
SNRPA1-206ENST00000558059 LINC01546A6NGU7 62 aa5.44□□□□□ -1.54
SNRPA1-206ENST00000558059 G0S2P27469 103 aa5.44□□□□□ -1.54
SNRPA1-206ENST00000558059 TOMM6Q96B49 74 aa5.44□□□□□ -1.54
SNRPA1-206ENST00000558059 TIMM17AQ99595 171 aa5.44□□□□□ -1.54
SNRPA1-206ENST00000558059 SRSF9Q13242 221 aaKnown RBP eCLIP5.43□□□□□ -1.54
SNRPA1-206ENST00000558059 RHEBQ15382 184 aa5.43□□□□□ -1.54
SNRPA1-206ENST00000558059 COX19Q49B96 90 aa5.43□□□□□ -1.54
SNRPA1-206ENST00000558059 SERTAD4-AS1Q5TG53 156 aa5.43□□□□□ -1.54
SNRPA1-206ENST00000558059 C2orf82Q6UX34 121 aa5.43□□□□□ -1.54
SNRPA1-206ENST00000558059 Q6ZRP5 223 aa5.43□□□□□ -1.54
SNRPA1-206ENST00000558059 RPS10P5Q9NQ39 176 aa5.43□□□□□ -1.54
SNRPA1-206ENST00000558059 TRBV30A0A0K0K1B3 111 aa5.42□□□□□ -1.54
SNRPA1-206ENST00000558059 FABP9Q0Z7S8 132 aa5.42□□□□□ -1.54
SNRPA1-206ENST00000558059 PAPPA-AS1Q5QFB9 102 aa5.42□□□□□ -1.54
SNRPA1-206ENST00000558059 PHF5AQ7RTV0 110 aaKnown RBP5.42□□□□□ -1.54
SNRPA1-206ENST00000558059 ERASQ7Z444 233 aa5.42□□□□□ -1.54
SNRPA1-206ENST00000558059 SCGB3A1Q96QR1 104 aa5.42□□□□□ -1.54
SNRPA1-206ENST00000558059 CDKN2A-AS1Q9UH64 79 aa5.42□□□□□ -1.54
SNRPA1-206ENST00000558059 FAM168BA1KXE4 195 aa5.41□□□□□ -1.54
SNRPA1-206ENST00000558059 MT-ND6P03923 174 aa5.41□□□□□ -1.54
SNRPA1-206ENST00000558059 HERVK_113P63121 156 aa5.41□□□□□ -1.54
SNRPA1-206ENST00000558059 SPINK6Q6UWN8 80 aa5.41□□□□□ -1.54
SNRPA1-206ENST00000558059 KRTAP7-1Q8IUC3 87 aa5.41□□□□□ -1.54
SNRPA1-206ENST00000558059 PSORS1C2Q9UIG4 136 aa5.41□□□□□ -1.54
SNRPA1-206ENST00000558059 SEC11AP67812 179 aa5.4□□□□□ -1.54
SNRPA1-206ENST00000558059 GAGE2EQ4V326 116 aa5.4□□□□□ -1.54
SNRPA1-206ENST00000558059 Q8IZM0 81 aa5.4□□□□□ -1.54
SNRPA1-206ENST00000558059 PACRGQ96M98 296 aaPredicted RBP5.4□□□□□ -1.54
SNRPA1-206ENST00000558059 LINC01600Q96MT4 127 aa5.4□□□□□ -1.54
SNRPA1-206ENST00000558059 GEMIN7Q9H840 131 aaKnown RBP5.4□□□□□ -1.54
SNRPA1-206ENST00000558059 TOMM7Q9P0U1 55 aa5.4□□□□□ -1.54
SNRPA1-206ENST00000558059 GAGE2DQ9UEU5 116 aa5.4□□□□□ -1.54
SNRPA1-206ENST00000558059 TINCRA0A1B0GVN0 87 aa5.39□□□□□ -1.55
SNRPA1-206ENST00000558059 LINC01549A6NIU2 74 aa5.39□□□□□ -1.55
SNRPA1-206ENST00000558059 NDUFC2-KCTD14E9PQ53 114 aa5.39□□□□□ -1.55
SNRPA1-206ENST00000558059 APOC3P02656 99 aa5.39□□□□□ -1.55
SNRPA1-206ENST00000558059 PRSS2P07478 247 aa5.39□□□□□ -1.55
SNRPA1-206ENST00000558059 C6orf226Q5I0X4 101 aa5.39□□□□□ -1.55
SNRPA1-206ENST00000558059 C9orf129Q5T035 196 aaKnown RBP5.39□□□□□ -1.55
SNRPA1-206ENST00000558059 FA2HQ7L5A8 372 aa5.39□□□□□ -1.55
SNRPA1-206ENST00000558059 KRTAP11-1Q8IUC1 163 aa5.39□□□□□ -1.55
SNRPA1-206ENST00000558059 CST9LQ9H4G1 147 aa5.39□□□□□ -1.55
SNRPA1-206ENST00000558059 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
SNRPA1-206ENST00000558059 A0A096LNJ9 63 aa5.38□□□□□ -1.55
SNRPA1-206ENST00000558059 TMEM238LA0A1B0GVL6 79 aa5.38□□□□□ -1.55
SNRPA1-206ENST00000558059 KRTAP10-8P60410 259 aa5.38□□□□□ -1.55
SNRPA1-206ENST00000558059 CKS1BP61024 79 aa5.38□□□□□ -1.55
SNRPA1-206ENST00000558059 FAM19A5Q7Z5A7 132 aaPredicted RBP5.38□□□□□ -1.55
SNRPA1-206ENST00000558059 LINC00469Q8N7U9 141 aa5.38□□□□□ -1.55
SNRPA1-206ENST00000558059 C18orf32Q8TCD1 76 aa5.38□□□□□ -1.55
SNRPA1-206ENST00000558059 URB1-AS1Q96HZ7 61 aa5.38□□□□□ -1.55
SNRPA1-206ENST00000558059 SMCO4Q9NRQ5 59 aa5.38□□□□□ -1.55
SNRPA1-206ENST00000558059 TRAPPC1Q9Y5R8 145 aa5.38□□□□□ -1.55
SNRPA1-206ENST00000558059 SMIM1B2RUZ4 78 aa5.37□□□□□ -1.55
SNRPA1-206ENST00000558059 LINC00310P59036 64 aa5.37□□□□□ -1.55
SNRPA1-206ENST00000558059 PMVKQ15126 192 aa5.37□□□□□ -1.55
SNRPA1-206ENST00000558059 C1orf137Q5JT78 98 aa5.37□□□□□ -1.55
SNRPA1-206ENST00000558059 REG3GQ6UW15 175 aa5.37□□□□□ -1.55
SNRPA1-206ENST00000558059 SVBPQ8N300 66 aa5.37□□□□□ -1.55
SNRPA1-206ENST00000558059 F8VRH5 84 aa5.36□□□□□ -1.55
SNRPA1-206ENST00000558059 SNAPINO95295 136 aa5.36□□□□□ -1.55
SNRPA1-206ENST00000558059 LINC00614P0C842 121 aa5.36□□□□□ -1.55
SNRPA1-206ENST00000558059 PDZD11Q5EBL8 140 aa5.36□□□□□ -1.55
SNRPA1-206ENST00000558059 YPEL4Q96NS1 127 aa5.36□□□□□ -1.55
SNRPA1-206ENST00000558059 PLA2G2DQ9UNK4 145 aa5.36□□□□□ -1.55
SNRPA1-206ENST00000558059 M0QXV9 152 aa5.35□□□□□ -1.55
SNRPA1-206ENST00000558059 IGLV7-43P04211 117 aa5.35□□□□□ -1.55
SNRPA1-206ENST00000558059 SPINK8P0C7L1 97 aa5.35□□□□□ -1.55
SNRPA1-206ENST00000558059 ODF1Q14990 250 aa5.35□□□□□ -1.55
SNRPA1-206ENST00000558059 NDUFA5Q16718 116 aa5.35□□□□□ -1.55
SNRPA1-206ENST00000558059 COX7B2Q8TF08 81 aa5.35□□□□□ -1.55
SNRPA1-206ENST00000558059 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
SNRPA1-206ENST00000558059 IGLC3P0DOY3 106 aa5.34□□□□□ -1.55
SNRPA1-206ENST00000558059 CXCL5P42830 114 aa5.34□□□□□ -1.55
SNRPA1-206ENST00000558059 PMCHL1Q16048 86 aa5.34□□□□□ -1.55
SNRPA1-206ENST00000558059 XAGE1AQ9HD64 81 aa5.34□□□□□ -1.55
SNRPA1-206ENST00000558059 IGLV5-39A0A0G2JS06 123 aa5.33□□□□□ -1.56
SNRPA1-206ENST00000558059 HBDP02042 147 aa5.33□□□□□ -1.56
SNRPA1-206ENST00000558059 UBE2BP63146 152 aa5.33□□□□□ -1.56
SNRPA1-206ENST00000558059 C22orf24Q9Y442 160 aa5.33□□□□□ -1.56
SNRPA1-206ENST00000558059 H3BRM9 83 aa5.32□□□□□ -1.56
SNRPA1-206ENST00000558059 ZNF22P17026 224 aaPredicted RBP5.32□□□□□ -1.56
SNRPA1-206ENST00000558059 NDUFA6P56556 154 aa5.32□□□□□ -1.56
SNRPA1-206ENST00000558059 RAB5BP61020 215 aa5.32□□□□□ -1.56
SNRPA1-206ENST00000558059 DIRC1Q969H9 104 aa5.32□□□□□ -1.56
SNRPA1-206ENST00000558059 H0Y9J4 135 aa5.31□□□□□ -1.56
SNRPA1-206ENST00000558059 ATP5LO75964 103 aa5.31□□□□□ -1.56
SNRPA1-206ENST00000558059 LRP2P98164 4655 aa5.31□□□□□ -1.56
SNRPA1-206ENST00000558059 TP73-AS1Q9UF72 201 aa5.31□□□□□ -1.56
SNRPA1-206ENST00000558059 C11orf86A6NJI1 115 aa5.3□□□□□ -1.56
SNRPA1-206ENST00000558059 H3BS24 57 aa5.3□□□□□ -1.56
SNRPA1-206ENST00000558059 LBHQ53QV2 105 aaPredicted RBP5.3□□□□□ -1.56
SNRPA1-206ENST00000558059 BAGE3Q86Y29 109 aa5.3□□□□□ -1.56
SNRPA1-206ENST00000558059 CBLN2Q8IUK8 224 aa5.3□□□□□ -1.56
SNRPA1-206ENST00000558059 KRTAP1-4P0C5Y4 121 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms