RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 LINC00167Q96N53 147 aa8.2□□□□□ -1.1
VIPAS39-211ENST00000557658 LRRK2Q5S007 2527 aa8.2□□□□□ -1.1
VIPAS39-211ENST00000557658 JMJD7-PLA2G4BH0Y9G9 81 aa8.2□□□□□ -1.1
VIPAS39-211ENST00000557658 J3KT08 172 aa8.2□□□□□ -1.1
VIPAS39-211ENST00000557658 S100A7L2Q5SY68 101 aa8.2□□□□□ -1.1
VIPAS39-211ENST00000557658 LINC01561Q8N1V8 128 aa8.2□□□□□ -1.1
VIPAS39-211ENST00000557658 A0A087WVE0 104 aa8.19□□□□□ -1.1
VIPAS39-211ENST00000557658 PIEZO1Q92508 2521 aa8.19□□□□□ -1.1
VIPAS39-211ENST00000557658 A0A1B0GUV1 79 aa8.19□□□□□ -1.1
VIPAS39-211ENST00000557658 USP17L23D6RBM5 183 aa8.19□□□□□ -1.1
VIPAS39-211ENST00000557658 SETXQ7Z333 2677 aaKnown RBP8.19□□□□□ -1.1
VIPAS39-211ENST00000557658 DEFB130BP0DP73 79 aa8.18□□□□□ -1.1
VIPAS39-211ENST00000557658 DEFB130AP0DP74 79 aa8.18□□□□□ -1.1
VIPAS39-211ENST00000557658 Q8N814 137 aa8.18□□□□□ -1.1
VIPAS39-211ENST00000557658 GYPEP15421 78 aa8.18□□□□□ -1.1
VIPAS39-211ENST00000557658 ESM1Q9NQ30 184 aa8.18□□□□□ -1.1
VIPAS39-211ENST00000557658 ABCA12Q86UK0 2595 aa8.18□□□□□ -1.1
VIPAS39-211ENST00000557658 TMEM256-PLSCR3K7ERE1 68 aa8.17□□□□□ -1.1
VIPAS39-211ENST00000557658 NDUFC2O95298 119 aa8.17□□□□□ -1.1
VIPAS39-211ENST00000557658 KIR2DL5BQ8NHK3 375 aa8.17□□□□□ -1.1
VIPAS39-211ENST00000557658 SONP18583 2426 aaKnown RBP8.17□□□□□ -1.1
VIPAS39-211ENST00000557658 LOC107984640A0A0U1RRK4 108 aa8.17□□□□□ -1.1
VIPAS39-211ENST00000557658 NANOS2P60321 138 aaKnown RBP8.17□□□□□ -1.1
VIPAS39-211ENST00000557658 ATP5EP2Q5VTU8 51 aa8.16□□□□□ -1.1
VIPAS39-211ENST00000557658 CFAP161Q6P656 301 aa8.16□□□□□ -1.1
VIPAS39-211ENST00000557658 CLPSL2Q6UWE3 100 aa8.16□□□□□ -1.1
VIPAS39-211ENST00000557658 RPS28P62857 69 aaKnown RBP8.16□□□□□ -1.1
VIPAS39-211ENST00000557658 KRTAP1-3Q8IUG1 177 aa8.16□□□□□ -1.1
VIPAS39-211ENST00000557658 TMEM258P61165 79 aa8.16□□□□□ -1.1
VIPAS39-211ENST00000557658 PRR3P79522 188 aaKnown RBP8.16□□□□□ -1.1
VIPAS39-211ENST00000557658 COX17Q14061 63 aa8.16□□□□□ -1.1
VIPAS39-211ENST00000557658 LINC00612Q8N6U2 182 aa8.15□□□□□ -1.1
VIPAS39-211ENST00000557658 LINC01006Q8NI28 216 aa8.15□□□□□ -1.1
VIPAS39-211ENST00000557658 UPK3BQ9BT76 320 aa8.15□□□□□ -1.1
VIPAS39-211ENST00000557658 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.11
VIPAS39-211ENST00000557658 PRB1P04280 392 aa8.14□□□□□ -1.11
VIPAS39-211ENST00000557658 PRO0255Q9UI72 69 aa8.14□□□□□ -1.11
VIPAS39-211ENST00000557658 KIAA0087Q14695 138 aa8.13□□□□□ -1.11
VIPAS39-211ENST00000557658 CD164L2Q6UWJ8 174 aa8.13□□□□□ -1.11
VIPAS39-211ENST00000557658 C16orf95Q9H693 158 aa8.13□□□□□ -1.11
VIPAS39-211ENST00000557658 ZNF462Q96JM2 2506 aa8.12□□□□□ -1.11
VIPAS39-211ENST00000557658 NF1P21359 2839 aa8.12□□□□□ -1.11
VIPAS39-211ENST00000557658 SETD2Q9BYW2 2564 aaPredicted RBP8.12□□□□□ -1.11
VIPAS39-211ENST00000557658 FAM19A5Q7Z5A7 132 aaPredicted RBP8.12□□□□□ -1.11
VIPAS39-211ENST00000557658 A0A096LPF7 62 aa8.12□□□□□ -1.11
VIPAS39-211ENST00000557658 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
VIPAS39-211ENST00000557658 UBL5Q9BZL1 73 aa8.12□□□□□ -1.11
VIPAS39-211ENST00000557658 NBPF19A0A087WUL8 3843 aa8.11□□□□□ -1.11
VIPAS39-211ENST00000557658 IGHV4-28A0A0C4DH34 117 aa8.11□□□□□ -1.11
VIPAS39-211ENST00000557658 C6orf99Q4VX62 202 aa8.11□□□□□ -1.11
VIPAS39-211ENST00000557658 LYPD5Q6UWN5 251 aa8.11□□□□□ -1.11
VIPAS39-211ENST00000557658 CHCHD10Q8WYQ3 142 aaPredicted RBP8.11□□□□□ -1.11
VIPAS39-211ENST00000557658 BBC3Q96PG8 261 aaPredicted RBP8.11□□□□□ -1.11
VIPAS39-211ENST00000557658 ITPR3Q14573 2671 aa8.11□□□□□ -1.11
VIPAS39-211ENST00000557658 HILS1P60008 231 aa8.11□□□□□ -1.11
VIPAS39-211ENST00000557658 TRBV10-3A0A0K0K1G6 114 aa8.1□□□□□ -1.11
VIPAS39-211ENST00000557658 RNASE1P07998 156 aaKnown RBP8.1□□□□□ -1.11
VIPAS39-211ENST00000557658 WFDC11Q8NEX6 87 aa8.1□□□□□ -1.11
VIPAS39-211ENST00000557658 GHRHP01286 108 aa8.1□□□□□ -1.11
VIPAS39-211ENST00000557658 ENHOQ6UWT2 76 aa8.1□□□□□ -1.11
VIPAS39-211ENST00000557658 WFDC9Q8NEX5 89 aa8.1□□□□□ -1.11
VIPAS39-211ENST00000557658 DPH3Q96FX2 82 aa8.1□□□□□ -1.11
VIPAS39-211ENST00000557658 NIPBLQ6KC79 2804 aaeCLIP8.09□□□□□ -1.11
VIPAS39-211ENST00000557658 C9orf116Q5BN46 136 aaPredicted RBP8.09□□□□□ -1.11
VIPAS39-211ENST00000557658 LINC00575Q6W349 94 aa8.09□□□□□ -1.11
VIPAS39-211ENST00000557658 IGLV10-54A0A075B6I4 117 aa8.09□□□□□ -1.12
VIPAS39-211ENST00000557658 TRAV23DV6A0A075B6W5 121 aa8.09□□□□□ -1.12
VIPAS39-211ENST00000557658 SMIM9A6NGZ8 99 aa8.09□□□□□ -1.12
VIPAS39-211ENST00000557658 ANGP03950 147 aaKnown RBP8.09□□□□□ -1.12
VIPAS39-211ENST00000557658 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.12
VIPAS39-211ENST00000557658 FN1P02751 2386 aaKnown RBP8.08□□□□□ -1.12
VIPAS39-211ENST00000557658 REG3AQ06141 175 aa8.08□□□□□ -1.12
VIPAS39-211ENST00000557658 X6R8D5 127 aa8.08□□□□□ -1.12
VIPAS39-211ENST00000557658 CUBNO60494 3623 aa8.08□□□□□ -1.12
VIPAS39-211ENST00000557658 ZNF469Q96JG9 3925 aaPredicted RBP8.08□□□□□ -1.12
VIPAS39-211ENST00000557658 RBM3P98179 157 aaKnown RBP8.08□□□□□ -1.12
VIPAS39-211ENST00000557658 UBR5O95071 2799 aaPredicted RBP8.07□□□□□ -1.12
VIPAS39-211ENST00000557658 ZNF561-AS1K7EIQ3 104 aa8.07□□□□□ -1.12
VIPAS39-211ENST00000557658 ZFYVE26Q68DK2 2539 aa8.07□□□□□ -1.12
VIPAS39-211ENST00000557658 Q8NDZ9 215 aa8.07□□□□□ -1.12
VIPAS39-211ENST00000557658 MUC7Q8TAX7 377 aa8.07□□□□□ -1.12
VIPAS39-211ENST00000557658 CCDC168Q8NDH2 2452 aa8.07□□□□□ -1.12
VIPAS39-211ENST00000557658 Q6ZQT0 140 aa8.06□□□□□ -1.12
VIPAS39-211ENST00000557658 LOC110117498A0A087WWA1 95 aa8.06□□□□□ -1.12
VIPAS39-211ENST00000557658 LYRM9A8MSI8 78 aa8.06□□□□□ -1.12
VIPAS39-211ENST00000557658 LAMTOR3Q9UHA4 124 aa8.06□□□□□ -1.12
VIPAS39-211ENST00000557658 C5orf47Q569G3 176 aa8.05□□□□□ -1.12
VIPAS39-211ENST00000557658 DSCR8Q96T75 97 aa8.05□□□□□ -1.12
VIPAS39-211ENST00000557658 APCP25054 2843 aa8.05□□□□□ -1.12
VIPAS39-211ENST00000557658 FLNAP21333 2647 aaKnown RBP8.05□□□□□ -1.12
VIPAS39-211ENST00000557658 C6orf223Q8N319 242 aa8.05□□□□□ -1.12
VIPAS39-211ENST00000557658 NDUFC2-KCTD14E9PQ53 114 aa8.04□□□□□ -1.12
VIPAS39-211ENST00000557658 Q8N3U1 123 aa8.04□□□□□ -1.12
VIPAS39-211ENST00000557658 SPAG11BQ08648 103 aa8.04□□□□□ -1.12
VIPAS39-211ENST00000557658 ZNF843Q8N446 348 aa8.04□□□□□ -1.12
VIPAS39-211ENST00000557658 UNQ6190/PRO20217Q6UXQ8 127 aa8.03□□□□□ -1.12
VIPAS39-211ENST00000557658 H3BQ85 93 aa8.03□□□□□ -1.12
VIPAS39-211ENST00000557658 BCE1O60756 84 aa8.02□□□□□ -1.13
VIPAS39-211ENST00000557658 IGLV6-57P01721 117 aa8.02□□□□□ -1.13
VIPAS39-211ENST00000557658 C10orf25Q5T742 122 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms