RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 TP73-AS1Q9UF72 201 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 HERC2O95714 4834 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 IGLV5-52A0A0A0MRZ9 124 aa3.07□□□□□ -1.92
SRP54-212ENST00000556992 A0A0J9YY99 117 aa3.07□□□□□ -1.92
SRP54-212ENST00000556992 TMEM238C9JI98 176 aa3.07□□□□□ -1.92
SRP54-212ENST00000556992 UBE2V1Q13404 147 aa3.07□□□□□ -1.92
SRP54-212ENST00000556992 SS18Q15532 418 aa3.07□□□□□ -1.92
SRP54-212ENST00000556992 C12orf74Q32Q52 190 aa3.07□□□□□ -1.92
SRP54-212ENST00000556992 RNASE13Q5GAN3 156 aaKnown RBP3.07□□□□□ -1.92
SRP54-212ENST00000556992 COPS9Q8WXC6 57 aa3.07□□□□□ -1.92
SRP54-212ENST00000556992 CDKN2A-AS1Q9UH64 79 aa3.07□□□□□ -1.92
SRP54-212ENST00000556992 NDUFA12Q9UI09 145 aa3.07□□□□□ -1.92
SRP54-212ENST00000556992 ICOSQ9Y6W8 199 aa3.07□□□□□ -1.92
SRP54-212ENST00000556992 SORL1Q92673 2214 aa3.07□□□□□ -1.92
SRP54-212ENST00000556992 IGHV3-64A0A075B6Q5 118 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 A0A0J9YXY3 114 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 A0A1B0GWB2 263 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 GAGE10A6NGK3 116 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 G3V4G9 280 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 TIMM17BO60830 172 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 SPINK8P0C7L1 97 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 CFC1BP0CG36 223 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 CFC1P0CG37 223 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 FABP2P12104 132 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 FXYD2P54710 66 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 TSPEAR-AS2P59090 65 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 RBX1P62877 108 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 HERV-K104P63124 156 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 RPL24P83731 157 aaKnown RBP3.06□□□□□ -1.92
SRP54-212ENST00000556992 COX6A2Q02221 97 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 C14orf177Q52M58 125 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 ZFAND6Q6FIF0 208 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 SFTA2Q6UW10 78 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 GTF2H5Q6ZYL4 71 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 DNAH3Q8TD57 4116 aa3.06□□□□□ -1.92
SRP54-212ENST00000556992 C11orf68Q9H3H3 251 aaKnown RBP3.06□□□□□ -1.92
SRP54-212ENST00000556992 NHP2Q9NX24 153 aaKnown RBP3.06□□□□□ -1.92
SRP54-212ENST00000556992 IGLV4-60A0A075B6I1 120 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 A0A087WZ39 114 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 TRAV8-3A0A0A6YYJ7 113 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.05□□□□□ -1.92
SRP54-212ENST00000556992 LINC00959A0A1B0GUT2 108 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 IGLL5B9A064 214 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 H3BUT2 72 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 NDUFA1O15239 70 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 IGHV3-30P01768 117 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 IGHV3-30-5P0DP03 117 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 IFITM1P13164 125 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 HTN3P15516 51 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 DEFB121Q5J5C9 76 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 KPRPQ5T749 579 aaPredicted RBP3.05□□□□□ -1.92
SRP54-212ENST00000556992 LELP1Q5T871 98 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 LYPD5Q6UWN5 251 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 LINC01561Q8N1V8 128 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 C11orf45Q8TAV5 145 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 RAB37Q96AX2 223 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 CELA1Q9UNI1 258 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 MUC4Q99102 2169 aa3.05□□□□□ -1.92
SRP54-212ENST00000556992 A0A096LPF7 62 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 IGHV3OR16-9A0A0B4J2B5 98 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 A0A1W2PPM0 123 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 SMIM1B2RUZ4 78 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 K7EP13 123 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 MIAQ16674 131 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 C6orf226Q5I0X4 101 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 CD164L2Q6UWJ8 174 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 MUSTN1Q8IVN3 82 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 C10orf126Q8N4M7 172 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 COX7B2Q8TF08 81 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 SPANXDQ9BXN6 97 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 SPANXCQ9NY87 97 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 PRO1854Q9UHT4 67 aa3.04□□□□□ -1.92
SRP54-212ENST00000556992 DNAH9Q9NYC9 4486 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 DEFB131BA0A096LNP1 70 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 IGKV3OR2-268A0A0C4DH90 116 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 A0A0J9YWU9 116 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 A4D1N5 150 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 K7EP34 96 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 K7ERJ3 54 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 COX7A2LO14548 114 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 ANGP03950 147 aaKnown RBP3.03□□□□□ -1.92
SRP54-212ENST00000556992 ADAMTSL4-AS1Q5T5F5 129 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 LYRM7Q5U5X0 104 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 LINC00269Q8N2A0 174 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 ZNF625Q96I27 306 aaPredicted RBP3.03□□□□□ -1.92
SRP54-212ENST00000556992 LITAFQ99732 161 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 PPDPFQ9H3Y8 114 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 Q9H8V8 135 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 RETNQ9HD89 108 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 ERG28Q9UKR5 140 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 SPCS1Q9Y6A9 102 aa3.03□□□□□ -1.92
SRP54-212ENST00000556992 TRBV20-1A0A075B6N2 111 aa3.02□□□□□ -1.93
SRP54-212ENST00000556992 TRAV10A0A0B4J240 114 aa3.02□□□□□ -1.93
SRP54-212ENST00000556992 TRAV8-4A0A0B4J246 113 aa3.02□□□□□ -1.93
SRP54-212ENST00000556992 A0A0B4J2C4 111 aa3.02□□□□□ -1.93
SRP54-212ENST00000556992 IBA57-AS1B1ANH7 110 aa3.02□□□□□ -1.93
SRP54-212ENST00000556992 K7EIL1 84 aa3.02□□□□□ -1.93
SRP54-212ENST00000556992 APOMO95445 188 aa3.02□□□□□ -1.93
SRP54-212ENST00000556992 SCGB1C2P0DMR2 95 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms