RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 COPS9Q8WXC6 57 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 DNAJC30Q96LL9 226 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 LINC01587Q99440 93 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 PPDPFQ9H3Y8 114 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 VPS13DQ5THJ4 4388 aa2.75□□□□□ -1.97
ATXN3-240ENST00000556339 IGLV4-69A0A075B6H9 119 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 IGHV3-16A0A0C4DH30 117 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 A0A0J9YXY3 114 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 TMEM223A0PJW6 202 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 A8MWV9 139 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 J3QQQ9 107 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 K7ERJ3 54 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 M0QY20 66 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 GNRH2O43555 120 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 TIMM17BO60830 172 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 APOMO95445 188 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 INSP01308 110 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 IGHV3-30P01768 117 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 IGHV3-30-5P0DP03 117 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 IFITM1P13164 125 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 LGALS3P17931 250 aaKnown RBP2.74□□□□□ -1.97
ATXN3-240ENST00000556339 WFDC2Q14508 124 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 TEN1Q86WV5 123 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 C15orf53Q8NAA6 179 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 C20orf203Q8NBC4 194 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 RPL39LQ96EH5 51 aaKnown RBP2.74□□□□□ -1.97
ATXN3-240ENST00000556339 SPXQ9BT56 116 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 PRO1854Q9UHT4 67 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 FRAS1Q86XX4 4008 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 DNAH6Q9C0G6 4158 aa2.74□□□□□ -1.97
ATXN3-240ENST00000556339 TRAV12-2A0A075B6T6 113 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 TRBV30A0A0K0K1B3 111 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 LYRM9A8MSI8 78 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 SMIM1B2RUZ4 78 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 M0R2P5 195 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 TSPAN13O95857 204 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 TSHBP01222 138 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 PRM2P04554 102 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 COX6CP09669 75 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 SCGB1C2P0DMR2 95 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 CCL18P55774 89 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 MRPS36P82909 103 aaKnown RBP2.73□□□□□ -1.97
ATXN3-240ENST00000556339 MRPL23Q16540 153 aaKnown RBP2.73□□□□□ -1.97
ATXN3-240ENST00000556339 SPINK13Q1W4C9 94 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 ETDBQ3ZM63 59 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 TMEM170BQ5T4T1 132 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 C1orf158Q8N1D5 194 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 AMELXQ99217 191 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 TIMM21Q9BVV7 248 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 TTTY13Q9BZ97 58 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 SPANXCQ9NY87 97 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 ERG28Q9UKR5 140 aa2.73□□□□□ -1.97
ATXN3-240ENST00000556339 IGLV4-3A0A075B6K6 122 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 IGHV1-58A0A0C4DH39 117 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 LOC107984156A0A0G2JMH3 177 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 TINCRA0A1B0GVN0 87 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 J3KRW8 73 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 RTL8CO15255 209 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 IGHV3-33P01772 117 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 ATP5G1P05496 136 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 RPL13AP40429 203 aaKnown RBP2.72□□□□□ -1.97
ATXN3-240ENST00000556339 PSMB2P49721 201 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 ATXN8Q156A1 80 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 ZNF56Q15929 161 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 Q6Q795 121 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 FAM19A3Q7Z5A8 133 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 ARL17AQ8IVW1 177 aa2.72□□□□□ -1.97
ATXN3-240ENST00000556339 NAA38Q9BRA0 125 aaKnown RBP2.72□□□□□ -1.97
ATXN3-240ENST00000556339 NOP10Q9NPE3 64 aaKnown RBP2.72□□□□□ -1.97
ATXN3-240ENST00000556339 CSDC2Q9Y534 153 aaKnown RBP2.72□□□□□ -1.97
ATXN3-240ENST00000556339 KIAA1109Q2LD37 5005 aa2.71□□□□□ -1.97
ATXN3-240ENST00000556339 TRAV12-3A0A0B4J271 114 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 TRBV10-1A0A0K0K1A3 114 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 TRBV10-2A0A0K0K1G8 114 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 FAM240AA0A1B0GVK7 77 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 C16orf90A8MZG2 172 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 H3BT86 120 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 PRB4P10163 310 aaPredicted RBP2.71□□□□□ -1.98
ATXN3-240ENST00000556339 ZNF22P17026 224 aaPredicted RBP2.71□□□□□ -1.98
ATXN3-240ENST00000556339 DSCR10P59022 87 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 ZNF415Q09FC8 603 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 CIRBPQ14011 172 aaKnown RBP2.71□□□□□ -1.98
ATXN3-240ENST00000556339 AMTNQ6UX39 209 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 Q6ZQT7 251 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 C6orf223Q8N319 242 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 ZNRF2Q8NHG8 242 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 TMEM263Q8WUH6 116 aaKnown RBP2.71□□□□□ -1.98
ATXN3-240ENST00000556339 C16orf74Q96GX8 76 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 GTSF1LQ9H1H1 148 aa2.71□□□□□ -1.98
ATXN3-240ENST00000556339 HECTD4Q9Y4D8 3996 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 TRGV2A0A075B6R0 118 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 IGLV5-45A0A087WSX0 123 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 NBDYA0A0U1RRE5 68 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 A4D1N5 150 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 H7C423 109 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 SLC25A20O43772 301 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 TCL1BO95988 128 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 IGHV3-53P01767 116 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms