RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 KRTAP10-10P60014 251 aa2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 RPL39P62891 51 aaKnown RBP2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 BLCAPP62952 87 aa2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 SPINK13Q1W4C9 94 aa2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 CFAP126Q5VTH2 177 aa2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 TEN1Q86WV5 123 aa2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 ZGRF1Q86YA3 2104 aa2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 MUSTN1Q8IVN3 82 aa2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 C10orf126Q8N4M7 172 aa2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 TEX29Q8N6K0 151 aa2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 DYNLRB2Q8TF09 96 aa2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 VCANP13611 3396 aa2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 CFAP54Q96N23 3096 aa2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 TNRC18O15417 2968 aaPredicted RBP2.04□□□□□ -2.08
SPTLC2-204ENST00000556264 A0A1B0GW54 56 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 KNCNA6PVL3 124 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 C19orf84I3L1E1 186 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 M0QY20 66 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 ZNF73O43830 326 aaPredicted RBP2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 TCL1BO95988 128 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 P0DMU3 169 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 FAM231AP0DMU4 169 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 FAM231CP0DMU5 169 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 COX6B1P14854 86 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 DEFB131AP59861 70 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 UBE2D3P61077 147 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 UBE2D2P62837 147 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 DEFB112Q30KQ8 113 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 C2orf82Q6UX34 121 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 ANKRD29Q8N6D5 301 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 SMCR5Q8TEV8 140 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 DCANP1Q8TF63 244 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 DNAJC30Q96LL9 226 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 SPANXA1Q9NS26 97 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 PLCE1Q9P212 2302 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 ARFGEF3Q5TH69 2177 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 FRYLO94915 3013 aa2.03□□□□□ -2.08
SPTLC2-204ENST00000556264 PLXNB1O43157 2135 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 SPEGQ15772 3267 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 IGHV1-58A0A0C4DH39 117 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 TRBV10-2A0A0K0K1G8 114 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 IGHV3-33P01772 117 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 IFITM1P13164 125 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 PSMB8P28062 276 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 INSL3P51460 131 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 MIAQ16674 131 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 MEIG1Q5JSS6 88 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 Q6ZUT4 128 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 TMEM263Q8WUH6 116 aaKnown RBP2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 C20orf166-AS1Q96NR2 134 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 SPANXDQ9BXN6 97 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 SPANXCQ9NY87 97 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 NDUFA12Q9UI09 145 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 RP1L1Q8IWN7 2480 aaPredicted RBP2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 FREM2Q5SZK8 3169 aa2.02□□□□□ -2.09
SPTLC2-204ENST00000556264 USP34Q70CQ2 3546 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 PRRC2CQ9Y520 2896 aaKnown RBP2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 OTOGLQ3ZCN5 2332 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 PKDREJQ9NTG1 2253 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 BDP1A6H8Y1 2624 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 TRBV30A0A0K0K1B3 111 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 FAM236DA0A1B0GTK5 79 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 IGKV2-29A2NJV5 120 aaPredicted RBP2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 H3BT86 120 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 TIMM17BO60830 172 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 MT-ATP8P03928 68 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 FAM236CP0DP71 79 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 NPC2P61916 151 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 MRPS36P82909 103 aaKnown RBP2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 SBSPONQ8IVN8 264 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 FRYQ5TBA9 3013 aa2.01□□□□□ -2.09
SPTLC2-204ENST00000556264 EP300Q09472 2414 aaPredicted RBP2□□□□□ -2.09
SPTLC2-204ENST00000556264 ROS1P08922 2347 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 TRGV1A0A0A0MS02 117 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 C3orf84H3BNL1 204 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 NDUFA1O15239 70 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 ACYP1P07311 99 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 C10orf99Q6UWK7 81 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 C15orf53Q8NAA6 179 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 C4orf3Q8WVX3 66 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 CARD19Q96LW7 228 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 AMELXQ99217 191 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 LINC00467Q9BRT7 94 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 UBE2D4Q9Y2X8 147 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 WDFY3Q8IZQ1 3526 aa2□□□□□ -2.09
SPTLC2-204ENST00000556264 DSPP15924 2871 aaKnown RBP2□□□□□ -2.09
SPTLC2-204ENST00000556264 CUL9Q8IWT3 2517 aa1.99□□□□□ -2.09
SPTLC2-204ENST00000556264 NBEAQ8NFP9 2946 aa1.99□□□□□ -2.09
SPTLC2-204ENST00000556264 VPS13AQ96RL7 3174 aa1.99□□□□□ -2.09
SPTLC2-204ENST00000556264 ZFHX2Q9C0A1 2572 aaPredicted RBP1.99□□□□□ -2.09
SPTLC2-204ENST00000556264 TRGV2A0A075B6R0 118 aa1.99□□□□□ -2.09
SPTLC2-204ENST00000556264 TRAV13-2A0A0B4J235 113 aa1.99□□□□□ -2.09
SPTLC2-204ENST00000556264 TRAV13-1A0A0B4J241 112 aa1.99□□□□□ -2.09
SPTLC2-204ENST00000556264 TRGV4A0A0C4DH28 118 aa1.99□□□□□ -2.09
SPTLC2-204ENST00000556264 TRBV10-1A0A0K0K1A3 114 aa1.99□□□□□ -2.09
SPTLC2-204ENST00000556264 DNAL4O96015 105 aa1.99□□□□□ -2.09
SPTLC2-204ENST00000556264 DEFB136Q30KP8 78 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms