RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 PPDPFQ9H3Y8 114 aa9.98□□□□□ -0.81
VPS33B-205ENST00000556096 IGLV10-54A0A075B6I4 117 aa9.97□□□□□ -0.81
VPS33B-205ENST00000556096 TRAV8-4A0A0B4J246 113 aa9.97□□□□□ -0.81
VPS33B-205ENST00000556096 GAGE10A6NGK3 116 aa9.97□□□□□ -0.81
VPS33B-205ENST00000556096 IGHV3-33P01772 117 aa9.97□□□□□ -0.81
VPS33B-205ENST00000556096 C6orf226Q5I0X4 101 aa9.97□□□□□ -0.81
VPS33B-205ENST00000556096 GTF2H5Q6ZYL4 71 aa9.97□□□□□ -0.81
VPS33B-205ENST00000556096 PGPEP1Q9NXJ5 209 aa9.97□□□□□ -0.81
VPS33B-205ENST00000556096 PRO1854Q9UHT4 67 aa9.97□□□□□ -0.81
VPS33B-205ENST00000556096 K7EP34 96 aa9.96□□□□□ -0.81
VPS33B-205ENST00000556096 LINC00308Q8TCZ7 52 aa9.96□□□□□ -0.82
VPS33B-205ENST00000556096 GAGE12HA6NDE8 117 aa9.95□□□□□ -0.82
VPS33B-205ENST00000556096 EIF4EBP3O60516 100 aaPredicted RBP9.95□□□□□ -0.82
VPS33B-205ENST00000556096 CRPP02741 224 aa9.95□□□□□ -0.82
VPS33B-205ENST00000556096 LINC01556Q5JQF7 62 aa9.95□□□□□ -0.82
VPS33B-205ENST00000556096 DAND5Q8N907 189 aa9.95□□□□□ -0.82
VPS33B-205ENST00000556096 SPCS1Q9Y6A9 102 aa9.95□□□□□ -0.82
VPS33B-205ENST00000556096 IBA57-AS1B1ANH7 110 aa9.94□□□□□ -0.82
VPS33B-205ENST00000556096 TSPAN13O95857 204 aa9.94□□□□□ -0.82
VPS33B-205ENST00000556096 MALP21145 153 aa9.94□□□□□ -0.82
VPS33B-205ENST00000556096 KIAA0087Q14695 138 aa9.94□□□□□ -0.82
VPS33B-205ENST00000556096 CXCL5P42830 114 aa9.93□□□□□ -0.82
VPS33B-205ENST00000556096 UBE2WQ96B02 151 aa9.93□□□□□ -0.82
VPS33B-205ENST00000556096 KLK5Q9Y337 293 aaPredicted RBP9.93□□□□□ -0.82
VPS33B-205ENST00000556096 DNAH7Q8WXX0 4024 aa9.93□□□□□ -0.82
VPS33B-205ENST00000556096 A0A0U1RRA0 63 aa9.93□□□□□ -0.82
VPS33B-205ENST00000556096 NPC2P61916 151 aa9.93□□□□□ -0.82
VPS33B-205ENST00000556096 CFAP161Q6P656 301 aa9.91□□□□□ -0.82
VPS33B-205ENST00000556096 ERG28Q9UKR5 140 aa9.91□□□□□ -0.82
VPS33B-205ENST00000556096 DNAH10OSP0CZ25 163 aa9.9□□□□□ -0.82
VPS33B-205ENST00000556096 CKS1BP61024 79 aa9.9□□□□□ -0.82
VPS33B-205ENST00000556096 SOSTDC1Q6X4U4 206 aa9.9□□□□□ -0.82
VPS33B-205ENST00000556096 LINC00158P58513 81 aa9.9□□□□□ -0.83
VPS33B-205ENST00000556096 MIR7-3HGQ8N6C7 128 aa9.9□□□□□ -0.83
VPS33B-205ENST00000556096 CCL18P55774 89 aa9.89□□□□□ -0.83
VPS33B-205ENST00000556096 LYRM7Q5U5X0 104 aa9.89□□□□□ -0.83
VPS33B-205ENST00000556096 LINC00588Q9Y4M8 146 aa9.89□□□□□ -0.83
VPS33B-205ENST00000556096 KRTAP26-1Q6PEX3 210 aa9.88□□□□□ -0.83
VPS33B-205ENST00000556096 C2orf82Q6UX34 121 aa9.88□□□□□ -0.83
VPS33B-205ENST00000556096 WWC2-AS2Q96NR7 200 aa9.87□□□□□ -0.83
VPS33B-205ENST00000556096 LOC107984156A0A0G2JMH3 177 aa9.87□□□□□ -0.83
VPS33B-205ENST00000556096 SPAG11BQ08648 103 aa9.87□□□□□ -0.83
VPS33B-205ENST00000556096 COX17Q14061 63 aa9.87□□□□□ -0.83
VPS33B-205ENST00000556096 ARL17AQ8IVW1 177 aa9.87□□□□□ -0.83
VPS33B-205ENST00000556096 CSMD3Q7Z407 3707 aa9.86□□□□□ -0.83
VPS33B-205ENST00000556096 PFN2P35080 140 aa9.86□□□□□ -0.83
VPS33B-205ENST00000556096 UPK3BQ9BT76 320 aa9.86□□□□□ -0.83
VPS33B-205ENST00000556096 STARD9Q9P2P6 4700 aa9.86□□□□□ -0.83
VPS33B-205ENST00000556096 TRBV30A0A0K0K1B3 111 aa9.85□□□□□ -0.83
VPS33B-205ENST00000556096 C1orf43Q9BWL3 253 aa9.85□□□□□ -0.83
VPS33B-205ENST00000556096 DYNC2H1Q8NCM8 4307 aaKnown RBP9.84□□□□□ -0.83
VPS33B-205ENST00000556096 TRBV20-1A0A075B6N2 111 aa9.84□□□□□ -0.83
VPS33B-205ENST00000556096 H7C2G1 150 aa9.84□□□□□ -0.83
VPS33B-205ENST00000556096 PSMB2P49721 201 aa9.84□□□□□ -0.83
VPS33B-205ENST00000556096 Q1RN00 199 aa9.84□□□□□ -0.83
VPS33B-205ENST00000556096 MUC7Q8TAX7 377 aa9.83□□□□□ -0.84
VPS33B-205ENST00000556096 SND1-IT1Q9HBX3 110 aa9.83□□□□□ -0.84
VPS33B-205ENST00000556096 SCGB1C2P0DMR2 95 aa9.82□□□□□ -0.84
VPS33B-205ENST00000556096 RPL13AP40429 203 aaKnown RBP9.82□□□□□ -0.84
VPS33B-205ENST00000556096 NTN5Q8WTR8 489 aaPredicted RBP9.82□□□□□ -0.84
VPS33B-205ENST00000556096 GVQW2A0A096LPI5 108 aaPredicted RBP9.82□□□□□ -0.84
VPS33B-205ENST00000556096 H3BMG7 143 aa9.82□□□□□ -0.84
VPS33B-205ENST00000556096 UNQ6190/PRO20217Q6UXQ8 127 aa9.82□□□□□ -0.84
VPS33B-205ENST00000556096 C6orf223Q8N319 242 aa9.82□□□□□ -0.84
VPS33B-205ENST00000556096 TRAV13-2A0A0B4J235 113 aa9.81□□□□□ -0.84
VPS33B-205ENST00000556096 PLECQ15149 4684 aaKnown RBP9.8□□□□□ -0.84
VPS33B-205ENST00000556096 IGKV2D-24A0A075B6R9 120 aa9.8□□□□□ -0.84
VPS33B-205ENST00000556096 F8W1H4 67 aa9.8□□□□□ -0.84
VPS33B-205ENST00000556096 TRIAP1O43715 76 aa9.8□□□□□ -0.84
VPS33B-205ENST00000556096 C10orf25Q5T742 122 aa9.8□□□□□ -0.84
VPS33B-205ENST00000556096 TCL1BO95988 128 aa9.79□□□□□ -0.84
VPS33B-205ENST00000556096 APLNQ9ULZ1 77 aa9.79□□□□□ -0.84
VPS33B-205ENST00000556096 IGKV2-28A0A075B6P5 120 aa9.79□□□□□ -0.84
VPS33B-205ENST00000556096 F8WDY8 70 aa9.79□□□□□ -0.84
VPS33B-205ENST00000556096 ZNF561-AS1K7EIQ3 104 aa9.79□□□□□ -0.84
VPS33B-205ENST00000556096 IGKV2D-28P01615 120 aa9.79□□□□□ -0.84
VPS33B-205ENST00000556096 COX6CP09669 75 aa9.79□□□□□ -0.84
VPS33B-205ENST00000556096 C15orf56Q8N910 161 aa9.79□□□□□ -0.84
VPS33B-205ENST00000556096 C9orf116Q5BN46 136 aaPredicted RBP9.78□□□□□ -0.84
VPS33B-205ENST00000556096 LINC00526Q96FQ7 95 aa9.78□□□□□ -0.84
VPS33B-205ENST00000556096 C2orf48Q96LS8 159 aa9.78□□□□□ -0.84
VPS33B-205ENST00000556096 PRO0461Q9UI25 63 aa9.77□□□□□ -0.85
VPS33B-205ENST00000556096 NUPR2A6NF83 97 aa9.76□□□□□ -0.85
VPS33B-205ENST00000556096 NDUFC2O95298 119 aa9.76□□□□□ -0.85
VPS33B-205ENST00000556096 LINC00337Q8N6G1 96 aa9.76□□□□□ -0.85
VPS33B-205ENST00000556096 RMI2Q96E14 147 aa9.76□□□□□ -0.85
VPS33B-205ENST00000556096 Q9HAA7 133 aa9.76□□□□□ -0.85
VPS33B-205ENST00000556096 HIGD2BQ4VC39 106 aa9.76□□□□□ -0.85
VPS33B-205ENST00000556096 CASC10Q5T4H9 136 aa9.76□□□□□ -0.85
VPS33B-205ENST00000556096 C6orf48Q9UBA6 75 aa9.76□□□□□ -0.85
VPS33B-205ENST00000556096 ATXN8Q156A1 80 aa9.75□□□□□ -0.85
VPS33B-205ENST00000556096 CAMK2N2Q96S95 79 aa9.75□□□□□ -0.85
VPS33B-205ENST00000556096 TENM2Q9NT68 2774 aa9.74□□□□□ -0.85
VPS33B-205ENST00000556096 C3orf84H3BNL1 204 aa9.73□□□□□ -0.85
VPS33B-205ENST00000556096 RPL28P46779 137 aaKnown RBP9.73□□□□□ -0.85
VPS33B-205ENST00000556096 WFDC2Q14508 124 aa9.73□□□□□ -0.85
VPS33B-205ENST00000556096 LYSTQ99698 3801 aa9.72□□□□□ -0.85
VPS33B-205ENST00000556096 Q6ZRU5 148 aa9.71□□□□□ -0.85
VPS33B-205ENST00000556096 UBE2DNLQ8IWF7 75 aa9.71□□□□□ -0.85
VPS33B-205ENST00000556096 LST1O00453 97 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms