RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 MRPL55Q7Z7F7 128 aaKnown RBP10.05□□□□□ -0.8
XRCC3-215ENST00000555964 LINC00469Q8N7U9 141 aa10.05□□□□□ -0.8
XRCC3-215ENST00000555964 F8VRH5 84 aa10.04□□□□□ -0.8
XRCC3-215ENST00000555964 BCE1O60756 84 aa10.04□□□□□ -0.8
XRCC3-215ENST00000555964 TSPAN13O95857 204 aa10.04□□□□□ -0.8
XRCC3-215ENST00000555964 G0S2P27469 103 aa10.04□□□□□ -0.8
XRCC3-215ENST00000555964 Q8N8P6 123 aa10.04□□□□□ -0.8
XRCC3-215ENST00000555964 XAGE1AQ9HD64 81 aa10.04□□□□□ -0.8
XRCC3-215ENST00000555964 LINC00173Q6ZV60 143 aa10.03□□□□□ -0.8
XRCC3-215ENST00000555964 FAM19A3Q7Z5A8 133 aa10.03□□□□□ -0.8
XRCC3-215ENST00000555964 TYMSOSQ8TAI1 123 aa10.03□□□□□ -0.8
XRCC3-215ENST00000555964 KRTAP3-3Q9BYR6 98 aa10.03□□□□□ -0.8
XRCC3-215ENST00000555964 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
XRCC3-215ENST00000555964 GEMIN7Q9H840 131 aaKnown RBP10.03□□□□□ -0.8
XRCC3-215ENST00000555964 MUC2Q02817 5179 aa10.03□□□□□ -0.8
XRCC3-215ENST00000555964 SRSF3P84103 164 aaKnown RBP10□□□□□ -0.81
XRCC3-215ENST00000555964 ZC2HC1BQ5TFG8 222 aa10□□□□□ -0.81
XRCC3-215ENST00000555964 NXT2Q9NPJ8 142 aaKnown RBP10□□□□□ -0.81
XRCC3-215ENST00000555964 A0A087X002 238 aa9.99□□□□□ -0.81
XRCC3-215ENST00000555964 IGIPA6NJ69 53 aa9.99□□□□□ -0.81
XRCC3-215ENST00000555964 CDKN2A-AS1Q9UH64 79 aa9.99□□□□□ -0.81
XRCC3-215ENST00000555964 TIMM17AQ99595 171 aa9.98□□□□□ -0.81
XRCC3-215ENST00000555964 PNRC1Q12796 327 aaPredicted RBP9.97□□□□□ -0.81
XRCC3-215ENST00000555964 ANAPC16Q96DE5 110 aa9.96□□□□□ -0.82
XRCC3-215ENST00000555964 MT-ND4LP03901 98 aa9.95□□□□□ -0.82
XRCC3-215ENST00000555964 UBE2AP49459 152 aa9.95□□□□□ -0.82
XRCC3-215ENST00000555964 FAM229BQ4G0N7 80 aa9.95□□□□□ -0.82
XRCC3-215ENST00000555964 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
XRCC3-215ENST00000555964 LINC00167Q96N53 147 aa9.95□□□□□ -0.82
XRCC3-215ENST00000555964 KRTAP9-2Q9BYQ4 174 aa9.95□□□□□ -0.82
XRCC3-215ENST00000555964 RPL37AP8A6NKH3 93 aa9.94□□□□□ -0.82
XRCC3-215ENST00000555964 PDZD11Q5EBL8 140 aa9.94□□□□□ -0.82
XRCC3-215ENST00000555964 COX7B2Q8TF08 81 aa9.93□□□□□ -0.82
XRCC3-215ENST00000555964 TOMM6Q96B49 74 aa9.93□□□□□ -0.82
XRCC3-215ENST00000555964 IGLV5-37A0A075B6J1 123 aa9.92□□□□□ -0.82
XRCC3-215ENST00000555964 LINC01549A6NIU2 74 aa9.92□□□□□ -0.82
XRCC3-215ENST00000555964 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
XRCC3-215ENST00000555964 CTAG1AP78358 180 aa9.92□□□□□ -0.82
XRCC3-215ENST00000555964 LINC00304Q8N9R0 145 aa9.92□□□□□ -0.82
XRCC3-215ENST00000555964 TINCRA0A1B0GVN0 87 aa9.91□□□□□ -0.82
XRCC3-215ENST00000555964 GAGE10A6NGK3 116 aa9.91□□□□□ -0.82
XRCC3-215ENST00000555964 ERASQ7Z444 233 aa9.91□□□□□ -0.82
XRCC3-215ENST00000555964 SCGB3A1Q96QR1 104 aa9.9□□□□□ -0.82
XRCC3-215ENST00000555964 CDIP1Q9H305 208 aa9.9□□□□□ -0.82
XRCC3-215ENST00000555964 IGLV5-45A0A087WSX0 123 aa9.89□□□□□ -0.83
XRCC3-215ENST00000555964 IGKV2D-26A0A0A0MRZ7 120 aa9.89□□□□□ -0.83
XRCC3-215ENST00000555964 TPRXLQ17RH7 258 aa9.89□□□□□ -0.83
XRCC3-215ENST00000555964 KRTAP13-1Q8IUC0 172 aa9.89□□□□□ -0.83
XRCC3-215ENST00000555964 KRTAP13-2Q52LG2 175 aa9.88□□□□□ -0.83
XRCC3-215ENST00000555964 ATP5LO75964 103 aa9.87□□□□□ -0.83
XRCC3-215ENST00000555964 LCE2AQ5TA79 106 aaPredicted RBP9.87□□□□□ -0.83
XRCC3-215ENST00000555964 MRPL18Q9H0U6 180 aaKnown RBP9.87□□□□□ -0.83
XRCC3-215ENST00000555964 ANAPC11Q9NYG5 84 aa9.87□□□□□ -0.83
XRCC3-215ENST00000555964 H3BRM9 83 aa9.86□□□□□ -0.83
XRCC3-215ENST00000555964 RAB5BP61020 215 aa9.86□□□□□ -0.83
XRCC3-215ENST00000555964 RETNLBQ9BQ08 111 aa9.86□□□□□ -0.83
XRCC3-215ENST00000555964 IGLV7-46A0A075B6I9 117 aa9.84□□□□□ -0.83
XRCC3-215ENST00000555964 IGKV2-28A0A075B6P5 120 aa9.84□□□□□ -0.83
XRCC3-215ENST00000555964 IGKV2D-28P01615 120 aa9.84□□□□□ -0.83
XRCC3-215ENST00000555964 SPINK8P0C7L1 97 aa9.83□□□□□ -0.84
XRCC3-215ENST00000555964 CST9LQ9H4G1 147 aa9.83□□□□□ -0.84
XRCC3-215ENST00000555964 RPL24P83731 157 aaKnown RBP9.82□□□□□ -0.84
XRCC3-215ENST00000555964 PMVKQ15126 192 aa9.82□□□□□ -0.84
XRCC3-215ENST00000555964 FAM19A1Q7Z5A9 133 aa9.82□□□□□ -0.84
XRCC3-215ENST00000555964 ADCYAP1P18509 176 aa9.81□□□□□ -0.84
XRCC3-215ENST00000555964 PRLHP81277 87 aa9.81□□□□□ -0.84
XRCC3-215ENST00000555964 TRAV9-1A0A075B6T8 112 aa9.8□□□□□ -0.84
XRCC3-215ENST00000555964 RAB14P61106 215 aa9.8□□□□□ -0.84
XRCC3-215ENST00000555964 KIAA1644Q3SXP7 199 aa9.8□□□□□ -0.84
XRCC3-215ENST00000555964 GNB1LQ9BYB4 327 aa9.8□□□□□ -0.84
XRCC3-215ENST00000555964 PFN2P35080 140 aa9.79□□□□□ -0.84
XRCC3-215ENST00000555964 COX17Q14061 63 aa9.79□□□□□ -0.84
XRCC3-215ENST00000555964 SPAG11AQ6PDA7 123 aa9.79□□□□□ -0.84
XRCC3-215ENST00000555964 TMEM126AQ9H061 195 aa9.79□□□□□ -0.84
XRCC3-215ENST00000555964 LINC01546A6NGU7 62 aa9.78□□□□□ -0.84
XRCC3-215ENST00000555964 SFTA2Q6UW10 78 aa9.78□□□□□ -0.84
XRCC3-215ENST00000555964 SMCO4Q9NRQ5 59 aa9.78□□□□□ -0.84
XRCC3-215ENST00000555964 FAT4Q6V0I7 4981 aa9.78□□□□□ -0.84
XRCC3-215ENST00000555964 SCO1O75880 301 aa9.77□□□□□ -0.85
XRCC3-215ENST00000555964 VPREB1P12018 145 aa9.77□□□□□ -0.85
XRCC3-215ENST00000555964 FA2HQ7L5A8 372 aa9.77□□□□□ -0.85
XRCC3-215ENST00000555964 CBLN2Q8IUK8 224 aa9.77□□□□□ -0.85
XRCC3-215ENST00000555964 PPDPFQ9H3Y8 114 aa9.77□□□□□ -0.85
XRCC3-215ENST00000555964 SND1-IT1Q9HBX3 110 aa9.77□□□□□ -0.85
XRCC3-215ENST00000555964 ERG28Q9UKR5 140 aa9.77□□□□□ -0.85
XRCC3-215ENST00000555964 MUC17Q685J3 4493 aa9.76□□□□□ -0.85
XRCC3-215ENST00000555964 A0A1B0GVG6 124 aa9.76□□□□□ -0.85
XRCC3-215ENST00000555964 TMEM238C9JI98 176 aa9.76□□□□□ -0.85
XRCC3-215ENST00000555964 IGLV5-39A0A0G2JS06 123 aa9.75□□□□□ -0.85
XRCC3-215ENST00000555964 IGLC3P0DOY3 106 aa9.75□□□□□ -0.85
XRCC3-215ENST00000555964 FP248Q71RG6 208 aaPredicted RBP9.75□□□□□ -0.85
XRCC3-215ENST00000555964 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
XRCC3-215ENST00000555964 KRTAP9-6A0A140TA67 174 aa9.74□□□□□ -0.85
XRCC3-215ENST00000555964 S100PP25815 95 aa9.74□□□□□ -0.85
XRCC3-215ENST00000555964 COX19Q49B96 90 aa9.74□□□□□ -0.85
XRCC3-215ENST00000555964 C4orf48Q5BLP8 95 aa9.74□□□□□ -0.85
XRCC3-215ENST00000555964 ZNF706Q9Y5V0 76 aaPredicted RBP9.74□□□□□ -0.85
XRCC3-215ENST00000555964 M0R378 163 aa9.73□□□□□ -0.85
XRCC3-215ENST00000555964 HIGD2AQ9BW72 106 aa9.73□□□□□ -0.85
XRCC3-215ENST00000555964 NDUFA6P56556 154 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms