RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 LINC01549A6NIU2 74 aa7.69□□□□□ -1.18
HNRNPC-221ENST00000555883 CKS1BP61024 79 aa7.69□□□□□ -1.18
HNRNPC-221ENST00000555883 CLLU1Q5K131 121 aa7.69□□□□□ -1.18
HNRNPC-221ENST00000555883 C9orf129Q5T035 196 aaKnown RBP7.69□□□□□ -1.18
HNRNPC-221ENST00000555883 IGLV1-50A0A075B6I6 118 aa7.68□□□□□ -1.18
HNRNPC-221ENST00000555883 UBE2BP63146 152 aa7.68□□□□□ -1.18
HNRNPC-221ENST00000555883 C6orf226Q5I0X4 101 aa7.68□□□□□ -1.18
HNRNPC-221ENST00000555883 XP32Q5T750 250 aa7.68□□□□□ -1.18
HNRNPC-221ENST00000555883 TOMM6Q96B49 74 aa7.68□□□□□ -1.18
HNRNPC-221ENST00000555883 CXCL5P42830 114 aa7.67□□□□□ -1.18
HNRNPC-221ENST00000555883 ZC2HC1BQ5TFG8 222 aa7.67□□□□□ -1.18
HNRNPC-221ENST00000555883 UQCC3Q6UW78 93 aa7.67□□□□□ -1.18
HNRNPC-221ENST00000555883 ERASQ7Z444 233 aa7.67□□□□□ -1.18
HNRNPC-221ENST00000555883 ALKBH7Q9BT30 221 aaPredicted RBP7.67□□□□□ -1.18
HNRNPC-221ENST00000555883 F8VRH5 84 aa7.66□□□□□ -1.18
HNRNPC-221ENST00000555883 KRTAP1-4P0C5Y4 121 aa7.66□□□□□ -1.18
HNRNPC-221ENST00000555883 PRR26Q8N8Z3 221 aa7.66□□□□□ -1.18
HNRNPC-221ENST00000555883 GEMIN7Q9H840 131 aaKnown RBP7.66□□□□□ -1.18
HNRNPC-221ENST00000555883 TOMM7Q9P0U1 55 aa7.66□□□□□ -1.18
HNRNPC-221ENST00000555883 CDKN2A-AS1Q9UH64 79 aa7.66□□□□□ -1.18
HNRNPC-221ENST00000555883 LINC01546A6NGU7 62 aa7.65□□□□□ -1.18
HNRNPC-221ENST00000555883 NUPR1O60356 82 aa7.65□□□□□ -1.18
HNRNPC-221ENST00000555883 RPL13AP40429 203 aaKnown RBP7.65□□□□□ -1.18
HNRNPC-221ENST00000555883 TP73-AS1Q9UF72 201 aa7.65□□□□□ -1.18
HNRNPC-221ENST00000555883 IGLV5-45A0A087WSX0 123 aa7.64□□□□□ -1.19
HNRNPC-221ENST00000555883 LBHQ53QV2 105 aaPredicted RBP7.64□□□□□ -1.19
HNRNPC-221ENST00000555883 GNB1LQ9BYB4 327 aa7.64□□□□□ -1.19
HNRNPC-221ENST00000555883 CARHSP1Q9Y2V2 147 aaKnown RBP7.64□□□□□ -1.19
HNRNPC-221ENST00000555883 TINCRA0A1B0GVN0 87 aa7.63□□□□□ -1.19
HNRNPC-221ENST00000555883 TMEM218A2RU14 115 aa7.63□□□□□ -1.19
HNRNPC-221ENST00000555883 ZNF861PO60384 105 aa7.63□□□□□ -1.19
HNRNPC-221ENST00000555883 ADCYAP1P18509 176 aa7.63□□□□□ -1.19
HNRNPC-221ENST00000555883 SCGB3A1Q96QR1 104 aa7.63□□□□□ -1.19
HNRNPC-221ENST00000555883 C22orf24Q9Y442 160 aa7.63□□□□□ -1.19
HNRNPC-221ENST00000555883 SMIM1B2RUZ4 78 aa7.62□□□□□ -1.19
HNRNPC-221ENST00000555883 COX19Q49B96 90 aa7.62□□□□□ -1.19
HNRNPC-221ENST00000555883 PDZD11Q5EBL8 140 aa7.62□□□□□ -1.19
HNRNPC-221ENST00000555883 S100PP25815 95 aa7.61□□□□□ -1.19
HNRNPC-221ENST00000555883 KIAA1644Q3SXP7 199 aa7.61□□□□□ -1.19
HNRNPC-221ENST00000555883 LINC00469Q8N7U9 141 aa7.61□□□□□ -1.19
HNRNPC-221ENST00000555883 SEC11CQ9BY50 192 aa7.61□□□□□ -1.19
HNRNPC-221ENST00000555883 XAGE1AQ9HD64 81 aa7.61□□□□□ -1.19
HNRNPC-221ENST00000555883 MRPL55Q7Z7F7 128 aaKnown RBP7.6□□□□□ -1.19
HNRNPC-221ENST00000555883 COX7B2Q8TF08 81 aa7.59□□□□□ -1.19
HNRNPC-221ENST00000555883 MRPL18Q9H0U6 180 aaKnown RBP7.59□□□□□ -1.19
HNRNPC-221ENST00000555883 CST9LQ9H4G1 147 aa7.59□□□□□ -1.19
HNRNPC-221ENST00000555883 IGLV5-37A0A075B6J1 123 aa7.58□□□□□ -1.2
HNRNPC-221ENST00000555883 PMVKQ15126 192 aa7.58□□□□□ -1.2
HNRNPC-221ENST00000555883 LPAP08519 4548 aa7.57□□□□□ -1.2
HNRNPC-221ENST00000555883 BCE1O60756 84 aa7.57□□□□□ -1.2
HNRNPC-221ENST00000555883 RPL28P46779 137 aaKnown RBP7.57□□□□□ -1.2
HNRNPC-221ENST00000555883 H3BRM9 83 aa7.56□□□□□ -1.2
HNRNPC-221ENST00000555883 IFITM2Q01629 132 aa7.56□□□□□ -1.2
HNRNPC-221ENST00000555883 RHEBQ15382 184 aa7.55□□□□□ -1.2
HNRNPC-221ENST00000555883 C10orf91Q5T1B1 145 aa7.55□□□□□ -1.2
HNRNPC-221ENST00000555883 FA2HQ7L5A8 372 aa7.55□□□□□ -1.2
HNRNPC-221ENST00000555883 KRTAP4-8Q9BYQ9 185 aa7.55□□□□□ -1.2
HNRNPC-221ENST00000555883 SMCO4Q9NRQ5 59 aa7.55□□□□□ -1.2
HNRNPC-221ENST00000555883 ATP5LO75964 103 aa7.54□□□□□ -1.2
HNRNPC-221ENST00000555883 SPINK8P0C7L1 97 aa7.54□□□□□ -1.2
HNRNPC-221ENST00000555883 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
HNRNPC-221ENST00000555883 LINC00167Q96N53 147 aa7.54□□□□□ -1.2
HNRNPC-221ENST00000555883 IGLV5-39A0A0G2JS06 123 aa7.53□□□□□ -1.2
HNRNPC-221ENST00000555883 IGLC3P0DOY3 106 aa7.53□□□□□ -1.2
HNRNPC-221ENST00000555883 FABP9Q0Z7S8 132 aa7.53□□□□□ -1.2
HNRNPC-221ENST00000555883 SFTA2Q6UW10 78 aa7.52□□□□□ -1.21
HNRNPC-221ENST00000555883 KRTAP13-1Q8IUC0 172 aa7.52□□□□□ -1.21
HNRNPC-221ENST00000555883 A0A096LNJ9 63 aa7.51□□□□□ -1.21
HNRNPC-221ENST00000555883 CRYGAP11844 174 aa7.51□□□□□ -1.21
HNRNPC-221ENST00000555883 COX17Q14061 63 aa7.51□□□□□ -1.21
HNRNPC-221ENST00000555883 NKAPP1Q8N9T2 125 aa7.51□□□□□ -1.21
HNRNPC-221ENST00000555883 A0A087X002 238 aa7.5□□□□□ -1.21
HNRNPC-221ENST00000555883 RPL37AP8A6NKH3 93 aa7.5□□□□□ -1.21
HNRNPC-221ENST00000555883 LINC00614P0C842 121 aa7.5□□□□□ -1.21
HNRNPC-221ENST00000555883 RAB5BP61020 215 aa7.5□□□□□ -1.21
HNRNPC-221ENST00000555883 COMMD7Q86VX2 200 aa7.5□□□□□ -1.21
HNRNPC-221ENST00000555883 RPS10P5Q9NQ39 176 aa7.5□□□□□ -1.21
HNRNPC-221ENST00000555883 HBDP02042 147 aa7.49□□□□□ -1.21
HNRNPC-221ENST00000555883 ZNF22P17026 224 aaPredicted RBP7.49□□□□□ -1.21
HNRNPC-221ENST00000555883 PRR4Q16378 134 aa7.49□□□□□ -1.21
HNRNPC-221ENST00000555883 C18orf32Q8TCD1 76 aa7.49□□□□□ -1.21
HNRNPC-221ENST00000555883 GAGE10A6NGK3 116 aa7.48□□□□□ -1.21
HNRNPC-221ENST00000555883 FAM229BQ4G0N7 80 aa7.48□□□□□ -1.21
HNRNPC-221ENST00000555883 TYMSOSQ8TAI1 123 aa7.48□□□□□ -1.21
HNRNPC-221ENST00000555883 URB1-AS1Q96HZ7 61 aa7.48□□□□□ -1.21
HNRNPC-221ENST00000555883 ERG28Q9UKR5 140 aa7.48□□□□□ -1.21
HNRNPC-221ENST00000555883 MUC2Q02817 5179 aa7.48□□□□□ -1.21
HNRNPC-221ENST00000555883 VPREB1P12018 145 aa7.47□□□□□ -1.21
HNRNPC-221ENST00000555883 UBE2AP49459 152 aa7.47□□□□□ -1.21
HNRNPC-221ENST00000555883 CTAG1AP78358 180 aa7.47□□□□□ -1.21
HNRNPC-221ENST00000555883 TRAPPC1Q9Y5R8 145 aa7.47□□□□□ -1.21
HNRNPC-221ENST00000555883 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.22
HNRNPC-221ENST00000555883 PFN2P35080 140 aa7.46□□□□□ -1.22
HNRNPC-221ENST00000555883 RPL24P83731 157 aaKnown RBP7.46□□□□□ -1.22
HNRNPC-221ENST00000555883 SND1-IT1Q9HBX3 110 aa7.46□□□□□ -1.22
HNRNPC-221ENST00000555883 IGKV2-28A0A075B6P5 120 aa7.45□□□□□ -1.22
HNRNPC-221ENST00000555883 IGKV2D-28P01615 120 aa7.45□□□□□ -1.22
HNRNPC-221ENST00000555883 NDUFA6P56556 154 aa7.45□□□□□ -1.22
HNRNPC-221ENST00000555883 C11orf86A6NJI1 115 aa7.44□□□□□ -1.22
HNRNPC-221ENST00000555883 ZNF625Q96I27 306 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms