RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 NTM-AS1Q6ZSK4 140 aa4.54□□□□□ -1.68
PSEN1-214ENST00000555867 C10orf126Q8N4M7 172 aa4.54□□□□□ -1.68
PSEN1-214ENST00000555867 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
PSEN1-214ENST00000555867 Q9UF83 564 aa4.54□□□□□ -1.68
PSEN1-214ENST00000555867 DMBT1Q9UGM3 2413 aaPredicted RBP4.53□□□□□ -1.68
PSEN1-214ENST00000555867 TRAV26-1A0A087WT03 109 aa4.53□□□□□ -1.68
PSEN1-214ENST00000555867 A0A1B0GUV1 79 aa4.53□□□□□ -1.68
PSEN1-214ENST00000555867 F8W1H4 67 aa4.53□□□□□ -1.68
PSEN1-214ENST00000555867 SPINK8P0C7L1 97 aa4.53□□□□□ -1.68
PSEN1-214ENST00000555867 MIAQ16674 131 aa4.53□□□□□ -1.68
PSEN1-214ENST00000555867 RNASE13Q5GAN3 156 aaKnown RBP4.53□□□□□ -1.68
PSEN1-214ENST00000555867 ATP6V0E2Q8NHE4 81 aa4.53□□□□□ -1.68
PSEN1-214ENST00000555867 CDKN2A-AS1Q9UH64 79 aa4.53□□□□□ -1.68
PSEN1-214ENST00000555867 PRO1854Q9UHT4 67 aa4.53□□□□□ -1.68
PSEN1-214ENST00000555867 ABCA13Q86UQ4 5058 aa4.53□□□□□ -1.68
PSEN1-214ENST00000555867 PKHD1P08F94 4074 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 IGHV3-64A0A075B6Q5 118 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 TRAV8-3A0A0A6YYJ7 113 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 SMIM1B2RUZ4 78 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 J3QR89 54 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 APOMO95445 188 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 LY6G6CO95867 125 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 ATP5G1P05496 136 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 DEFB130BP0DP73 79 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 DEFB130AP0DP74 79 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 GYPEP15421 78 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 DAD1P61803 113 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 DEFB135Q30KP9 77 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 FAM222AQ5U5X8 452 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 LINC01561Q8N1V8 128 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 CHCHD5Q9BSY4 110 aa4.52□□□□□ -1.69
PSEN1-214ENST00000555867 TRAV13-1A0A0B4J241 112 aa4.51□□□□□ -1.69
PSEN1-214ENST00000555867 A4D1N5 150 aa4.51□□□□□ -1.69
PSEN1-214ENST00000555867 A8MZ25 164 aa4.51□□□□□ -1.69
PSEN1-214ENST00000555867 TSPAN13O95857 204 aa4.51□□□□□ -1.69
PSEN1-214ENST00000555867 CFC1BP0CG36 223 aa4.51□□□□□ -1.69
PSEN1-214ENST00000555867 CFC1P0CG37 223 aa4.51□□□□□ -1.69
PSEN1-214ENST00000555867 SPART-AS1P0CW21 52 aa4.51□□□□□ -1.69
PSEN1-214ENST00000555867 OCIAD2Q56VL3 154 aa4.51□□□□□ -1.69
PSEN1-214ENST00000555867 LITAFQ99732 161 aa4.51□□□□□ -1.69
PSEN1-214ENST00000555867 NAA38Q9BRA0 125 aaKnown RBP4.51□□□□□ -1.69
PSEN1-214ENST00000555867 ERG28Q9UKR5 140 aa4.51□□□□□ -1.69
PSEN1-214ENST00000555867 CBY1Q9Y3M2 126 aa4.51□□□□□ -1.69
PSEN1-214ENST00000555867 IGHV4-28A0A0C4DH34 117 aa4.5□□□□□ -1.69
PSEN1-214ENST00000555867 LOC100131303A0A0U1RQF7 123 aa4.5□□□□□ -1.69
PSEN1-214ENST00000555867 F5H768 121 aa4.5□□□□□ -1.69
PSEN1-214ENST00000555867 COX6CP09669 75 aa4.5□□□□□ -1.69
PSEN1-214ENST00000555867 GAGE6Q13070 117 aa4.5□□□□□ -1.69
PSEN1-214ENST00000555867 SS18Q15532 418 aa4.5□□□□□ -1.69
PSEN1-214ENST00000555867 MUSTN1Q8IVN3 82 aa4.5□□□□□ -1.69
PSEN1-214ENST00000555867 Q8NAQ8 132 aa4.5□□□□□ -1.69
PSEN1-214ENST00000555867 Q9H8V8 135 aa4.5□□□□□ -1.69
PSEN1-214ENST00000555867 LOC107984156A0A0G2JMH3 177 aa4.49□□□□□ -1.69
PSEN1-214ENST00000555867 TRBV30A0A0K0K1B3 111 aa4.49□□□□□ -1.69
PSEN1-214ENST00000555867 M0QXV9 152 aa4.49□□□□□ -1.69
PSEN1-214ENST00000555867 IGHV3-33P01772 117 aa4.49□□□□□ -1.69
PSEN1-214ENST00000555867 PRSS2P07478 247 aa4.49□□□□□ -1.69
PSEN1-214ENST00000555867 IGHV4-30-4P0DP06 118 aa4.49□□□□□ -1.69
PSEN1-214ENST00000555867 COX6A2Q02221 97 aa4.49□□□□□ -1.69
PSEN1-214ENST00000555867 MRPL23Q16540 153 aaKnown RBP4.49□□□□□ -1.69
PSEN1-214ENST00000555867 Q1RN00 199 aa4.49□□□□□ -1.69
PSEN1-214ENST00000555867 MEIG1Q5JSS6 88 aa4.49□□□□□ -1.69
PSEN1-214ENST00000555867 ARL17AQ8IVW1 177 aa4.49□□□□□ -1.69
PSEN1-214ENST00000555867 COX7B2Q8TF08 81 aa4.49□□□□□ -1.69
PSEN1-214ENST00000555867 ZNF625Q96I27 306 aaPredicted RBP4.49□□□□□ -1.69
PSEN1-214ENST00000555867 ICOSQ9Y6W8 199 aa4.49□□□□□ -1.69
PSEN1-214ENST00000555867 A0A087WZ39 114 aa4.48□□□□□ -1.69
PSEN1-214ENST00000555867 IGHV3OR16-9A0A0B4J2B5 98 aa4.48□□□□□ -1.69
PSEN1-214ENST00000555867 H3BMG7 143 aa4.48□□□□□ -1.69
PSEN1-214ENST00000555867 H3BNG1 76 aa4.48□□□□□ -1.69
PSEN1-214ENST00000555867 SCGB1C2P0DMR2 95 aa4.48□□□□□ -1.69
PSEN1-214ENST00000555867 CXCL5P42830 114 aa4.48□□□□□ -1.69
PSEN1-214ENST00000555867 PSMB2P49721 201 aa4.48□□□□□ -1.69
PSEN1-214ENST00000555867 HERC1Q15751 4861 aa4.48□□□□□ -1.69
PSEN1-214ENST00000555867 VPS13DQ5THJ4 4388 aa4.48□□□□□ -1.69
PSEN1-214ENST00000555867 IGLV4-60A0A075B6I1 120 aa4.47□□□□□ -1.69
PSEN1-214ENST00000555867 LINC00959A0A1B0GUT2 108 aa4.47□□□□□ -1.69
PSEN1-214ENST00000555867 IBA57-AS1B1ANH7 110 aa4.47□□□□□ -1.69
PSEN1-214ENST00000555867 RBX1P62877 108 aa4.47□□□□□ -1.69
PSEN1-214ENST00000555867 ATXN8Q156A1 80 aa4.47□□□□□ -1.69
PSEN1-214ENST00000555867 LELP1Q5T871 98 aa4.47□□□□□ -1.69
PSEN1-214ENST00000555867 LINC00308Q8TCZ7 52 aa4.47□□□□□ -1.69
PSEN1-214ENST00000555867 C11orf68Q9H3H3 251 aaKnown RBP4.47□□□□□ -1.69
PSEN1-214ENST00000555867 RETNQ9HD89 108 aa4.47□□□□□ -1.69
PSEN1-214ENST00000555867 TMEM262E9PQX1 116 aa4.46□□□□□ -1.7
PSEN1-214ENST00000555867 ADAMTSL4-AS1Q5T5F5 129 aa4.46□□□□□ -1.7
PSEN1-214ENST00000555867 Q8IZM0 81 aa4.46□□□□□ -1.7
PSEN1-214ENST00000555867 VPS25Q9BRG1 176 aa4.46□□□□□ -1.7
PSEN1-214ENST00000555867 PRO0461Q9UI25 63 aa4.46□□□□□ -1.7
PSEN1-214ENST00000555867 HSPG2P98160 4391 aa4.45□□□□□ -1.7
PSEN1-214ENST00000555867 TRAV13-2A0A0B4J235 113 aa4.45□□□□□ -1.7
PSEN1-214ENST00000555867 TCL1BO95988 128 aa4.45□□□□□ -1.7
PSEN1-214ENST00000555867 CD164L2Q6UWJ8 174 aa4.45□□□□□ -1.7
PSEN1-214ENST00000555867 LINC01600Q96MT4 127 aa4.45□□□□□ -1.7
PSEN1-214ENST00000555867 FLG2Q5D862 2391 aaPredicted RBP4.45□□□□□ -1.7
PSEN1-214ENST00000555867 DNAH11Q96DT5 4516 aa4.44□□□□□ -1.7
PSEN1-214ENST00000555867 IGKV3OR2-268A0A0C4DH90 116 aa4.44□□□□□ -1.7
PSEN1-214ENST00000555867 A0A1B0GVY2 172 aa4.44□□□□□ -1.7
PSEN1-214ENST00000555867 RPL13AP40429 203 aaKnown RBP4.44□□□□□ -1.7
PSEN1-214ENST00000555867 COX17Q14061 63 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms