RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 IFITM1P13164 125 aa12.5□□□□□ -0.41
GABRB3-209ENST00000555632 ENHOQ6UWT2 76 aa12.5□□□□□ -0.41
GABRB3-209ENST00000555632 C2orf82Q6UX34 121 aa12.5□□□□□ -0.41
GABRB3-209ENST00000555632 MTURNQ8N3F0 131 aa12.5□□□□□ -0.41
GABRB3-209ENST00000555632 PRR34Q9NV39 138 aa12.49□□□□□ -0.41
GABRB3-209ENST00000555632 FOXI1Q12951 378 aa12.49□□□□□ -0.41
GABRB3-209ENST00000555632 C6orf226Q5I0X4 101 aa12.49□□□□□ -0.41
GABRB3-209ENST00000555632 COX7A2LO14548 114 aa12.48□□□□□ -0.41
GABRB3-209ENST00000555632 ERG28Q9UKR5 140 aa12.48□□□□□ -0.41
GABRB3-209ENST00000555632 LYSTQ99698 3801 aa12.48□□□□□ -0.41
GABRB3-209ENST00000555632 MIR7-3HGQ8N6C7 128 aa12.47□□□□□ -0.41
GABRB3-209ENST00000555632 STAB2Q8WWQ8 2551 aa12.47□□□□□ -0.41
GABRB3-209ENST00000555632 PFN2P35080 140 aa12.46□□□□□ -0.41
GABRB3-209ENST00000555632 KIAA0087Q14695 138 aa12.46□□□□□ -0.42
GABRB3-209ENST00000555632 Q8IZM0 81 aa12.46□□□□□ -0.42
GABRB3-209ENST00000555632 DNHD1Q96M86 4753 aa12.45□□□□□ -0.42
GABRB3-209ENST00000555632 GAGE12HA6NDE8 117 aa12.45□□□□□ -0.42
GABRB3-209ENST00000555632 PSMB2P49721 201 aa12.45□□□□□ -0.42
GABRB3-209ENST00000555632 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
GABRB3-209ENST00000555632 TCL1BO95988 128 aa12.44□□□□□ -0.42
GABRB3-209ENST00000555632 MALP21145 153 aa12.44□□□□□ -0.42
GABRB3-209ENST00000555632 LINC00158P58513 81 aa12.44□□□□□ -0.42
GABRB3-209ENST00000555632 Q1RN00 199 aa12.44□□□□□ -0.42
GABRB3-209ENST00000555632 LINC01561Q8N1V8 128 aa12.43□□□□□ -0.42
GABRB3-209ENST00000555632 SCGB1C2P0DMR2 95 aa12.42□□□□□ -0.42
GABRB3-209ENST00000555632 WFDC2Q14508 124 aa12.42□□□□□ -0.42
GABRB3-209ENST00000555632 LINC00526Q96FQ7 95 aa12.42□□□□□ -0.42
GABRB3-209ENST00000555632 IBA57-AS1B1ANH7 110 aa12.41□□□□□ -0.42
GABRB3-209ENST00000555632 TRIAP1O43715 76 aa12.41□□□□□ -0.42
GABRB3-209ENST00000555632 RPL13AP40429 203 aaKnown RBP12.41□□□□□ -0.42
GABRB3-209ENST00000555632 PRO0461Q9UI25 63 aa12.41□□□□□ -0.42
GABRB3-209ENST00000555632 TRAV10A0A0B4J240 114 aa12.4□□□□□ -0.42
GABRB3-209ENST00000555632 C6orf223Q8N319 242 aa12.4□□□□□ -0.42
GABRB3-209ENST00000555632 CRPP02741 224 aa12.4□□□□□ -0.43
GABRB3-209ENST00000555632 CKS1BP61024 79 aa12.4□□□□□ -0.43
GABRB3-209ENST00000555632 C9orf116Q5BN46 136 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-209ENST00000555632 CCL18P55774 89 aa12.38□□□□□ -0.43
GABRB3-209ENST00000555632 TRBV30A0A0K0K1B3 111 aa12.37□□□□□ -0.43
GABRB3-209ENST00000555632 F8W1H4 67 aa12.37□□□□□ -0.43
GABRB3-209ENST00000555632 OCIAD2Q56VL3 154 aa12.37□□□□□ -0.43
GABRB3-209ENST00000555632 CFAP161Q6P656 301 aa12.37□□□□□ -0.43
GABRB3-209ENST00000555632 C10orf25Q5T742 122 aa12.37□□□□□ -0.43
GABRB3-209ENST00000555632 COPS9Q8WXC6 57 aa12.37□□□□□ -0.43
GABRB3-209ENST00000555632 CSMD3Q7Z407 3707 aa12.36□□□□□ -0.43
GABRB3-209ENST00000555632 IGKV2-28A0A075B6P5 120 aa12.36□□□□□ -0.43
GABRB3-209ENST00000555632 IGKV2D-28P01615 120 aa12.36□□□□□ -0.43
GABRB3-209ENST00000555632 SMCPP49901 116 aaPredicted RBP12.36□□□□□ -0.43
GABRB3-209ENST00000555632 LYRM7Q5U5X0 104 aa12.36□□□□□ -0.43
GABRB3-209ENST00000555632 SND1-IT1Q9HBX3 110 aa12.36□□□□□ -0.43
GABRB3-209ENST00000555632 DNAH1Q9P2D7 4330 aa12.36□□□□□ -0.43
GABRB3-209ENST00000555632 KRTAP26-1Q6PEX3 210 aa12.35□□□□□ -0.43
GABRB3-209ENST00000555632 KLK5Q9Y337 293 aaPredicted RBP12.35□□□□□ -0.43
GABRB3-209ENST00000555632 PRKDCP78527 4128 aaKnown RBP12.35□□□□□ -0.43
GABRB3-209ENST00000555632 TRBV20-1A0A075B6N2 111 aa12.35□□□□□ -0.43
GABRB3-209ENST00000555632 SPAG11BQ08648 103 aa12.35□□□□□ -0.43
GABRB3-209ENST00000555632 TRAV8-4A0A0B4J246 113 aa12.34□□□□□ -0.43
GABRB3-209ENST00000555632 LINC01556Q5JQF7 62 aa12.34□□□□□ -0.43
GABRB3-209ENST00000555632 UNQ6190/PRO20217Q6UXQ8 127 aa12.34□□□□□ -0.43
GABRB3-209ENST00000555632 LINC00337Q8N6G1 96 aa12.34□□□□□ -0.43
GABRB3-209ENST00000555632 PPDPFQ9H3Y8 114 aa12.34□□□□□ -0.43
GABRB3-209ENST00000555632 LINC00588Q9Y4M8 146 aa12.34□□□□□ -0.43
GABRB3-209ENST00000555632 ETDBQ3ZM63 59 aa12.32□□□□□ -0.44
GABRB3-209ENST00000555632 CXCL5P42830 114 aa12.32□□□□□ -0.44
GABRB3-209ENST00000555632 C15orf53Q8NAA6 179 aa12.32□□□□□ -0.44
GABRB3-209ENST00000555632 CLEC2BQ92478 149 aa12.32□□□□□ -0.44
GABRB3-209ENST00000555632 DNAH7Q8WXX0 4024 aa12.29□□□□□ -0.44
GABRB3-209ENST00000555632 DNAH10OSP0CZ25 163 aa12.29□□□□□ -0.44
GABRB3-209ENST00000555632 HIGD2BQ4VC39 106 aa12.29□□□□□ -0.44
GABRB3-209ENST00000555632 TENM2Q9NT68 2774 aa12.28□□□□□ -0.44
GABRB3-209ENST00000555632 C9JAW5 83 aa12.28□□□□□ -0.44
GABRB3-209ENST00000555632 PRR3P79522 188 aaKnown RBP12.28□□□□□ -0.44
GABRB3-209ENST00000555632 Q9HAA7 133 aa12.28□□□□□ -0.44
GABRB3-209ENST00000555632 IGKV2D-24A0A075B6R9 120 aa12.27□□□□□ -0.45
GABRB3-209ENST00000555632 COX17Q14061 63 aa12.27□□□□□ -0.45
GABRB3-209ENST00000555632 COX6CP09669 75 aa12.26□□□□□ -0.45
GABRB3-209ENST00000555632 ATXN8Q156A1 80 aa12.26□□□□□ -0.45
GABRB3-209ENST00000555632 Q8NDZ9 215 aa12.26□□□□□ -0.45
GABRB3-209ENST00000555632 NTN5Q8WTR8 489 aaPredicted RBP12.26□□□□□ -0.45
GABRB3-209ENST00000555632 B9D2Q9BPU9 175 aa12.26□□□□□ -0.45
GABRB3-209ENST00000555632 TRAV13-2A0A0B4J235 113 aa12.26□□□□□ -0.45
GABRB3-209ENST00000555632 C15orf56Q8N910 161 aa12.26□□□□□ -0.45
GABRB3-209ENST00000555632 C1orf43Q9BWL3 253 aa12.26□□□□□ -0.45
GABRB3-209ENST00000555632 MEGF8Q7Z7M0 2845 aa12.25□□□□□ -0.45
GABRB3-209ENST00000555632 DYNC2H1Q8NCM8 4307 aaKnown RBP12.25□□□□□ -0.45
GABRB3-209ENST00000555632 RNF151Q2KHN1 245 aa12.25□□□□□ -0.45
GABRB3-209ENST00000555632 DNAH10Q8IVF4 4471 aa12.25□□□□□ -0.45
GABRB3-209ENST00000555632 PLECQ15149 4684 aaKnown RBP12.25□□□□□ -0.45
GABRB3-209ENST00000555632 LINC01620Q4KN68 170 aa12.25□□□□□ -0.45
GABRB3-209ENST00000555632 C6orf48Q9UBA6 75 aa12.25□□□□□ -0.45
GABRB3-209ENST00000555632 K7ERU9 68 aa12.23□□□□□ -0.45
GABRB3-209ENST00000555632 SLC25A20O43772 301 aa12.23□□□□□ -0.45
GABRB3-209ENST00000555632 LST1O00453 97 aa12.22□□□□□ -0.45
GABRB3-209ENST00000555632 SMIM11BQ8TCY0 68 aa12.22□□□□□ -0.45
GABRB3-209ENST00000555632 ZNF561-AS1K7EIQ3 104 aa12.21□□□□□ -0.45
GABRB3-209ENST00000555632 OR13C6PQ8NH95 151 aa12.2□□□□□ -0.46
GABRB3-209ENST00000555632 FAM218AQ96MZ4 157 aa12.2□□□□□ -0.46
GABRB3-209ENST00000555632 RPL28P46779 137 aaKnown RBP12.2□□□□□ -0.46
GABRB3-209ENST00000555632 CASC10Q5T4H9 136 aa12.19□□□□□ -0.46
GABRB3-209ENST00000555632 CAMK2N2Q96S95 79 aa12.19□□□□□ -0.46
GABRB3-209ENST00000555632 GVQW2A0A096LPI5 108 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms