RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 UBE2BP63146 152 aa6.51□□□□□ -1.37
TDP1-212ENST00000555565 KIAA1644Q3SXP7 199 aa6.51□□□□□ -1.37
TDP1-212ENST00000555565 C6orf226Q5I0X4 101 aa6.51□□□□□ -1.37
TDP1-212ENST00000555565 Q8IZM0 81 aa6.51□□□□□ -1.37
TDP1-212ENST00000555565 CDKN2A-AS1Q9UH64 79 aa6.51□□□□□ -1.37
TDP1-212ENST00000555565 KRTAP1-4P0C5Y4 121 aa6.5□□□□□ -1.37
TDP1-212ENST00000555565 HERVK_113P63121 156 aa6.5□□□□□ -1.37
TDP1-212ENST00000555565 CLLU1Q5K131 121 aa6.5□□□□□ -1.37
TDP1-212ENST00000555565 LINC00469Q8N7U9 141 aa6.5□□□□□ -1.37
TDP1-212ENST00000555565 TOMM6Q96B49 74 aa6.5□□□□□ -1.37
TDP1-212ENST00000555565 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
TDP1-212ENST00000555565 ALKBH7Q9BT30 221 aaPredicted RBP6.5□□□□□ -1.37
TDP1-212ENST00000555565 G0S2P27469 103 aa6.49□□□□□ -1.37
TDP1-212ENST00000555565 SEC11AP67812 179 aa6.49□□□□□ -1.37
TDP1-212ENST00000555565 PAPPA-AS1Q5QFB9 102 aa6.49□□□□□ -1.37
TDP1-212ENST00000555565 XAGE1AQ9HD64 81 aa6.49□□□□□ -1.37
TDP1-212ENST00000555565 F8VRH5 84 aa6.48□□□□□ -1.37
TDP1-212ENST00000555565 ERASQ7Z444 233 aa6.48□□□□□ -1.37
TDP1-212ENST00000555565 GEMIN7Q9H840 131 aaKnown RBP6.48□□□□□ -1.37
TDP1-212ENST00000555565 IGLV1-50A0A075B6I6 118 aa6.47□□□□□ -1.37
TDP1-212ENST00000555565 TRAV9-1A0A075B6T8 112 aa6.47□□□□□ -1.37
TDP1-212ENST00000555565 TMEM218A2RU14 115 aa6.47□□□□□ -1.37
TDP1-212ENST00000555565 SCGB3A1Q96QR1 104 aa6.47□□□□□ -1.37
TDP1-212ENST00000555565 C22orf24Q9Y442 160 aa6.47□□□□□ -1.37
TDP1-212ENST00000555565 LINC01546A6NGU7 62 aa6.46□□□□□ -1.38
TDP1-212ENST00000555565 SMIM1B2RUZ4 78 aa6.46□□□□□ -1.38
TDP1-212ENST00000555565 UQCC3Q6UW78 93 aa6.46□□□□□ -1.38
TDP1-212ENST00000555565 FSIP2Q5CZC0 6907 aa6.46□□□□□ -1.38
TDP1-212ENST00000555565 IGLV5-45A0A087WSX0 123 aa6.45□□□□□ -1.38
TDP1-212ENST00000555565 TINCRA0A1B0GVN0 87 aa6.45□□□□□ -1.38
TDP1-212ENST00000555565 ZNF861PO60384 105 aa6.45□□□□□ -1.38
TDP1-212ENST00000555565 CXCL5P42830 114 aa6.45□□□□□ -1.38
TDP1-212ENST00000555565 IFITM2Q01629 132 aa6.45□□□□□ -1.38
TDP1-212ENST00000555565 GNB1LQ9BYB4 327 aa6.45□□□□□ -1.38
TDP1-212ENST00000555565 LBHQ53QV2 105 aaPredicted RBP6.44□□□□□ -1.38
TDP1-212ENST00000555565 PDZD11Q5EBL8 140 aa6.44□□□□□ -1.38
TDP1-212ENST00000555565 COX7B2Q8TF08 81 aa6.44□□□□□ -1.38
TDP1-212ENST00000555565 CST9LQ9H4G1 147 aa6.44□□□□□ -1.38
TDP1-212ENST00000555565 TP73-AS1Q9UF72 201 aa6.44□□□□□ -1.38
TDP1-212ENST00000555565 LINC01549A6NIU2 74 aa6.43□□□□□ -1.38
TDP1-212ENST00000555565 NUPR1O60356 82 aa6.43□□□□□ -1.38
TDP1-212ENST00000555565 S100PP25815 95 aa6.43□□□□□ -1.38
TDP1-212ENST00000555565 RPL13AP40429 203 aaKnown RBP6.43□□□□□ -1.38
TDP1-212ENST00000555565 MRPL55Q7Z7F7 128 aaKnown RBP6.43□□□□□ -1.38
TDP1-212ENST00000555565 SEC11CQ9BY50 192 aa6.43□□□□□ -1.38
TDP1-212ENST00000555565 SPINK8P0C7L1 97 aa6.42□□□□□ -1.38
TDP1-212ENST00000555565 PRR4Q16378 134 aa6.42□□□□□ -1.38
TDP1-212ENST00000555565 CARHSP1Q9Y2V2 147 aaKnown RBP6.42□□□□□ -1.38
TDP1-212ENST00000555565 MUC17Q685J3 4493 aa6.42□□□□□ -1.38
TDP1-212ENST00000555565 PMVKQ15126 192 aa6.41□□□□□ -1.38
TDP1-212ENST00000555565 FA2HQ7L5A8 372 aa6.41□□□□□ -1.38
TDP1-212ENST00000555565 LINC00167Q96N53 147 aa6.41□□□□□ -1.38
TDP1-212ENST00000555565 MRPL18Q9H0U6 180 aaKnown RBP6.41□□□□□ -1.38
TDP1-212ENST00000555565 RPL37AP8A6NKH3 93 aa6.4□□□□□ -1.38
TDP1-212ENST00000555565 BCE1O60756 84 aa6.4□□□□□ -1.38
TDP1-212ENST00000555565 RAB5BP61020 215 aa6.4□□□□□ -1.38
TDP1-212ENST00000555565 FABP9Q0Z7S8 132 aa6.4□□□□□ -1.38
TDP1-212ENST00000555565 COX19Q49B96 90 aa6.4□□□□□ -1.38
TDP1-212ENST00000555565 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
TDP1-212ENST00000555565 IGLV5-37A0A075B6J1 123 aa6.39□□□□□ -1.39
TDP1-212ENST00000555565 A0A096LNJ9 63 aa6.39□□□□□ -1.39
TDP1-212ENST00000555565 GAGE10A6NGK3 116 aa6.39□□□□□ -1.39
TDP1-212ENST00000555565 RPL28P46779 137 aaKnown RBP6.39□□□□□ -1.39
TDP1-212ENST00000555565 C10orf91Q5T1B1 145 aa6.39□□□□□ -1.39
TDP1-212ENST00000555565 SMCO4Q9NRQ5 59 aa6.39□□□□□ -1.39
TDP1-212ENST00000555565 A0A087X002 238 aa6.38□□□□□ -1.39
TDP1-212ENST00000555565 COMMD7Q86VX2 200 aa6.38□□□□□ -1.39
TDP1-212ENST00000555565 URB1-AS1Q96HZ7 61 aa6.38□□□□□ -1.39
TDP1-212ENST00000555565 IGLV5-39A0A0G2JS06 123 aa6.37□□□□□ -1.39
TDP1-212ENST00000555565 H3BRM9 83 aa6.37□□□□□ -1.39
TDP1-212ENST00000555565 ATP5LO75964 103 aa6.37□□□□□ -1.39
TDP1-212ENST00000555565 IGLC3P0DOY3 106 aa6.37□□□□□ -1.39
TDP1-212ENST00000555565 RHEBQ15382 184 aa6.37□□□□□ -1.39
TDP1-212ENST00000555565 RPS10P5Q9NQ39 176 aa6.37□□□□□ -1.39
TDP1-212ENST00000555565 ZNF22P17026 224 aaPredicted RBP6.36□□□□□ -1.39
TDP1-212ENST00000555565 KRTAP13-1Q8IUC0 172 aa6.36□□□□□ -1.39
TDP1-212ENST00000555565 NKAPP1Q8N9T2 125 aa6.36□□□□□ -1.39
TDP1-212ENST00000555565 SCO1O75880 301 aa6.35□□□□□ -1.39
TDP1-212ENST00000555565 TSPAN13O95857 204 aa6.35□□□□□ -1.39
TDP1-212ENST00000555565 PFN2P35080 140 aa6.35□□□□□ -1.39
TDP1-212ENST00000555565 NDUFA6P56556 154 aa6.35□□□□□ -1.39
TDP1-212ENST00000555565 C18orf32Q8TCD1 76 aa6.35□□□□□ -1.39
TDP1-212ENST00000555565 ANAPC11Q9NYG5 84 aa6.35□□□□□ -1.39
TDP1-212ENST00000555565 IGKV2-28A0A075B6P5 120 aa6.34□□□□□ -1.39
TDP1-212ENST00000555565 IGKV2D-28P01615 120 aa6.34□□□□□ -1.39
TDP1-212ENST00000555565 LINC00614P0C842 121 aa6.34□□□□□ -1.39
TDP1-212ENST00000555565 CRYGAP11844 174 aa6.34□□□□□ -1.39
TDP1-212ENST00000555565 PMCHL1Q16048 86 aa6.34□□□□□ -1.39
TDP1-212ENST00000555565 C4orf48Q5BLP8 95 aa6.34□□□□□ -1.39
TDP1-212ENST00000555565 TYMSOSQ8TAI1 123 aa6.34□□□□□ -1.39
TDP1-212ENST00000555565 TRAPPC1Q9Y5R8 145 aa6.34□□□□□ -1.39
TDP1-212ENST00000555565 HBDP02042 147 aa6.33□□□□□ -1.4
TDP1-212ENST00000555565 VPREB1P12018 145 aa6.33□□□□□ -1.4
TDP1-212ENST00000555565 UBE2AP49459 152 aa6.33□□□□□ -1.4
TDP1-212ENST00000555565 SND1-IT1Q9HBX3 110 aa6.33□□□□□ -1.4
TDP1-212ENST00000555565 ERG28Q9UKR5 140 aa6.33□□□□□ -1.4
TDP1-212ENST00000555565 C11orf86A6NJI1 115 aa6.32□□□□□ -1.4
TDP1-212ENST00000555565 KRTAP13-2Q52LG2 175 aa6.32□□□□□ -1.4
TDP1-212ENST00000555565 Q8NDZ9 215 aa6.32□□□□□ -1.4
TDP1-212ENST00000555565 ZNF625Q96I27 306 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms