RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 RERGLQ9H628 205 aa-1.43□□□□□ -2.64
SNX6-204ENST00000555541 PATJQ8NI35 1801 aa-1.43□□□□□ -2.64
SNX6-204ENST00000555541 ADAMTS12P58397 1594 aa-1.43□□□□□ -2.64
SNX6-204ENST00000555541 CFTRP13569 1480 aa-1.43□□□□□ -2.64
SNX6-204ENST00000555541 PAPPA2Q9BXP8 1791 aa-1.44□□□□□ -2.64
SNX6-204ENST00000555541 DOCK2Q92608 1830 aa-1.44□□□□□ -2.64
SNX6-204ENST00000555541 SPEF2Q9C093 1822 aa-1.44□□□□□ -2.64
SNX6-204ENST00000555541 MIF4GDA9UHW6 222 aaKnown RBP-1.44□□□□□ -2.64
SNX6-204ENST00000555541 C9orf153Q5TBE3 101 aa-1.44□□□□□ -2.64
SNX6-204ENST00000555541 CDC42SE2Q9NRR3 84 aa-1.44□□□□□ -2.64
SNX6-204ENST00000555541 CPSF1Q10570 1443 aaKnown RBP-1.44□□□□□ -2.64
SNX6-204ENST00000555541 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.44□□□□□ -2.642e-11■■□□□ 13.3
SNX6-204ENST00000555541 ANK3Q12955 4377 aaKnown RBP-1.44□□□□□ -2.64
SNX6-204ENST00000555541 PTPN23Q9H3S7 1636 aa-1.44□□□□□ -2.64
SNX6-204ENST00000555541 A0A1B0GU69 56 aa-1.45□□□□□ -2.64
SNX6-204ENST00000555541 SNCAP37840 140 aa-1.45□□□□□ -2.64
SNX6-204ENST00000555541 COMMD6Q7Z4G1 85 aa-1.45□□□□□ -2.64
SNX6-204ENST00000555541 ARL11Q969Q4 196 aa-1.45□□□□□ -2.64
SNX6-204ENST00000555541 PFDN5Q99471 154 aa-1.45□□□□□ -2.64
SNX6-204ENST00000555541 MRPL34Q9BQ48 92 aaKnown RBP-1.45□□□□□ -2.64
SNX6-204ENST00000555541 SNRNP25Q9BV90 132 aaKnown RBP-1.45□□□□□ -2.64
SNX6-204ENST00000555541 LINC00474Q9P2X8 69 aa-1.45□□□□□ -2.64
SNX6-204ENST00000555541 USP9XQ93008 2570 aaPredicted RBP-1.45□□□□□ -2.64
SNX6-204ENST00000555541 BTAF1O14981 1849 aa-1.45□□□□□ -2.64
SNX6-204ENST00000555541 CCL22O00626 93 aa-1.46□□□□□ -2.64
SNX6-204ENST00000555541 ARPC4P59998 168 aa-1.46□□□□□ -2.64
SNX6-204ENST00000555541 Q56UQ5 140 aa-1.46□□□□□ -2.64
SNX6-204ENST00000555541 LELP1Q5T871 98 aa-1.46□□□□□ -2.64
SNX6-204ENST00000555541 SFTA2Q6UW10 78 aa-1.46□□□□□ -2.64
SNX6-204ENST00000555541 WFDC13Q8IUB5 93 aa-1.46□□□□□ -2.64
SNX6-204ENST00000555541 C8orf59Q8N0T1 100 aaPredicted RBP-1.46□□□□□ -2.64
SNX6-204ENST00000555541 PYDC1Q8WXC3 89 aa-1.46□□□□□ -2.64
SNX6-204ENST00000555541 CDKN2A-AS1Q9UH64 79 aa-1.46□□□□□ -2.64
SNX6-204ENST00000555541 DMXL1Q9Y485 3027 aa-1.47□□□□□ -2.64
SNX6-204ENST00000555541 ANKRD11Q6UB99 2663 aaPredicted RBP-1.47□□□□□ -2.64
SNX6-204ENST00000555541 MYOM1P52179 1685 aa-1.47□□□□□ -2.64
SNX6-204ENST00000555541 COL4A6Q14031 1691 aa-1.47□□□□□ -2.64
SNX6-204ENST00000555541 NLRP1Q9C000 1473 aa-1.47□□□□□ -2.64
SNX6-204ENST00000555541 TRAPPC2P0DI81 140 aa-1.47□□□□□ -2.64
SNX6-204ENST00000555541 TRAPPC2BP0DI82 140 aa-1.47□□□□□ -2.64
SNX6-204ENST00000555541 C5orf38Q86SI9 138 aa-1.47□□□□□ -2.64
SNX6-204ENST00000555541 ANP32BQ92688 251 aaKnown RBP-1.47□□□□□ -2.64
SNX6-204ENST00000555541 A0A0G2JMZ2 1700 aa-1.47□□□□□ -2.64
SNX6-204ENST00000555541 COL12A1Q99715 3063 aa-1.48□□□□□ -2.65
SNX6-204ENST00000555541 TET3O43151 1660 aa-1.48□□□□□ -2.65
SNX6-204ENST00000555541 PLEKHH2Q8IVE3 1493 aa-1.48□□□□□ -2.65
SNX6-204ENST00000555541 MGAM2Q2M2H8 2515 aa-1.48□□□□□ -2.65
SNX6-204ENST00000555541 FAM223BA6NKX1 122 aa-1.48□□□□□ -2.65
SNX6-204ENST00000555541 DEFA5Q01523 94 aa-1.48□□□□□ -2.65
SNX6-204ENST00000555541 DR1Q01658 176 aa-1.48□□□□□ -2.65
SNX6-204ENST00000555541 CATR1Q13166 79 aa-1.48□□□□□ -2.65
SNX6-204ENST00000555541 MANBALQ9NQG1 85 aa-1.48□□□□□ -2.65
SNX6-204ENST00000555541 ACACAQ13085 2346 aa-1.48□□□□□ -2.65
SNX6-204ENST00000555541 REV3LO60673 3130 aa-1.49□□□□□ -2.65
SNX6-204ENST00000555541 SMG6Q86US8 1419 aaKnown RBP-1.49□□□□□ -2.65
SNX6-204ENST00000555541 GRIN2AQ12879 1464 aa-1.49□□□□□ -2.65
SNX6-204ENST00000555541 FAM25AB3EWG3 89 aa-1.49□□□□□ -2.65
SNX6-204ENST00000555541 FAM25CB3EWG5 89 aa-1.49□□□□□ -2.65
SNX6-204ENST00000555541 FAM25GB3EWG6 89 aa-1.49□□□□□ -2.65
SNX6-204ENST00000555541 SMIM21Q3B7S5 101 aa-1.49□□□□□ -2.65
SNX6-204ENST00000555541 MEIG1Q5JSS6 88 aa-1.49□□□□□ -2.65
SNX6-204ENST00000555541 HIGD1BQ9P298 99 aa-1.49□□□□□ -2.65
SNX6-204ENST00000555541 LAMA3Q16787 3333 aa-1.49□□□□□ -2.65
SNX6-204ENST00000555541 DNAH1Q9P2D7 4330 aa-1.49□□□□□ -2.65
SNX6-204ENST00000555541 TRANK1O15050 2925 aa-1.5□□□□□ -2.65
SNX6-204ENST00000555541 ARHGEF5Q12774 1597 aa-1.5□□□□□ -2.65
SNX6-204ENST00000555541 C9orf92A6NGG3 77 aa-1.5□□□□□ -2.65
SNX6-204ENST00000555541 APOC2P02655 101 aa-1.5□□□□□ -2.65
SNX6-204ENST00000555541 GNG11P61952 73 aa-1.5□□□□□ -2.65
SNX6-204ENST00000555541 C6orf201Q7Z4U5 140 aa-1.5□□□□□ -2.65
SNX6-204ENST00000555541 XRN1Q8IZH2 1706 aaKnown RBP-1.5□□□□□ -2.65
SNX6-204ENST00000555541 ANKRD50Q9ULJ7 1429 aa-1.5□□□□□ -2.65
SNX6-204ENST00000555541 WDR87Q6ZQQ6 2873 aa-1.5□□□□□ -2.65
SNX6-204ENST00000555541 EHBP1L1Q8N3D4 1523 aa-1.5□□□□□ -2.65
SNX6-204ENST00000555541 PSME4Q14997 1843 aa-1.51□□□□□ -2.65
SNX6-204ENST00000555541 COX6CP09669 75 aa-1.51□□□□□ -2.65
SNX6-204ENST00000555541 SAA2P0DJI9 122 aaPredicted RBP-1.51□□□□□ -2.65
SNX6-204ENST00000555541 LINC00846Q9NV44 126 aa-1.51□□□□□ -2.65
SNX6-204ENST00000555541 ADGRL2O95490 1459 aa-1.51□□□□□ -2.65
SNX6-204ENST00000555541 CMYA5Q8N3K9 4069 aa-1.51□□□□□ -2.65
SNX6-204ENST00000555541 ZZEF1O43149 2961 aa-1.52□□□□□ -2.65
SNX6-204ENST00000555541 SPTY2D1-AS1A0A0U1RR47 76 aa-1.52□□□□□ -2.65
SNX6-204ENST00000555541 F6UZH7 168 aa-1.52□□□□□ -2.65
SNX6-204ENST00000555541 C12orf57Q99622 126 aa-1.52□□□□□ -2.65
SNX6-204ENST00000555541 CICQ96RK0 1608 aaPredicted RBP-1.52□□□□□ -2.65
SNX6-204ENST00000555541 A0A087WVE0 104 aa-1.53□□□□□ -2.65
SNX6-204ENST00000555541 Q0VG73 95 aa-1.53□□□□□ -2.65
SNX6-204ENST00000555541 KALRNO60229 2985 aa-1.54□□□□□ -2.66
SNX6-204ENST00000555541 CLIP1P30622 1438 aa-1.54□□□□□ -2.66
SNX6-204ENST00000555541 EDC4Q6P2E9 1401 aaKnown RBP-1.54□□□□□ -2.66
SNX6-204ENST00000555541 GNGT1P63211 74 aa-1.54□□□□□ -2.66
SNX6-204ENST00000555541 SACSQ9NZJ4 4579 aa-1.54□□□□□ -2.66
SNX6-204ENST00000555541 MARF1Q9Y4F3 1742 aaKnown RBP-1.54□□□□□ -2.66
SNX6-204ENST00000555541 MTORP42345 2549 aa-1.55□□□□□ -2.66
SNX6-204ENST00000555541 A0A0G2JND7 137 aa-1.55□□□□□ -2.66
SNX6-204ENST00000555541 UBE2L5PA0A1B0GUS4 154 aa-1.55□□□□□ -2.66
SNX6-204ENST00000555541 H3BQF6 201 aa-1.55□□□□□ -2.66
SNX6-204ENST00000555541 UBE2L3P68036 154 aaKnown RBP-1.55□□□□□ -2.66
SNX6-204ENST00000555541 PRO1854Q9UHT4 67 aa-1.55□□□□□ -2.66
SNX6-204ENST00000555541 DNAH7Q8WXX0 4024 aa-1.56□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms