RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 SNHG12Q9BXW3 62 aa7.44□□□□□ -1.22
XRCC3-213ENST00000555451 COX11Q9Y6N1 276 aa7.44□□□□□ -1.22
XRCC3-213ENST00000555451 ALMS1Q8TCU4 4167 aa7.43□□□□□ -1.22
XRCC3-213ENST00000555451 SPAG11BQ08648 103 aa7.43□□□□□ -1.22
XRCC3-213ENST00000555451 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
XRCC3-213ENST00000555451 CIRBPQ14011 172 aaKnown RBP7.43□□□□□ -1.22
XRCC3-213ENST00000555451 BVES-AS1Q5T3Y7 98 aa7.43□□□□□ -1.22
XRCC3-213ENST00000555451 EREGO14944 169 aa7.42□□□□□ -1.22
XRCC3-213ENST00000555451 CKS1BP61024 79 aa7.42□□□□□ -1.22
XRCC3-213ENST00000555451 KIAA0087Q14695 138 aa7.42□□□□□ -1.22
XRCC3-213ENST00000555451 MEIG1Q5JSS6 88 aa7.42□□□□□ -1.22
XRCC3-213ENST00000555451 Q6ZVH6 145 aa7.42□□□□□ -1.22
XRCC3-213ENST00000555451 CEND1Q8N111 149 aa7.42□□□□□ -1.22
XRCC3-213ENST00000555451 TM2D2Q9BX73 214 aa7.42□□□□□ -1.22
XRCC3-213ENST00000555451 SPANXDQ9BXN6 97 aa7.42□□□□□ -1.22
XRCC3-213ENST00000555451 SPANXCQ9NY87 97 aa7.42□□□□□ -1.22
XRCC3-213ENST00000555451 GCSHP23434 173 aa7.41□□□□□ -1.22
XRCC3-213ENST00000555451 BATFQ16520 125 aa7.41□□□□□ -1.22
XRCC3-213ENST00000555451 LBHQ53QV2 105 aaPredicted RBP7.41□□□□□ -1.22
XRCC3-213ENST00000555451 LINC00476Q8WZB0 136 aa7.41□□□□□ -1.22
XRCC3-213ENST00000555451 LITAFQ99732 161 aa7.41□□□□□ -1.22
XRCC3-213ENST00000555451 NBDYA0A0U1RRE5 68 aa7.4□□□□□ -1.22
XRCC3-213ENST00000555451 F8WDY8 70 aa7.4□□□□□ -1.22
XRCC3-213ENST00000555451 KRTAP1-5Q9BYS1 174 aa7.4□□□□□ -1.22
XRCC3-213ENST00000555451 HYDINQ4G0P3 5121 aa7.39□□□□□ -1.23
XRCC3-213ENST00000555451 GVQW2A0A096LPI5 108 aaPredicted RBP7.39□□□□□ -1.23
XRCC3-213ENST00000555451 TMEM238LA0A1B0GVL6 79 aa7.39□□□□□ -1.23
XRCC3-213ENST00000555451 A6NJY4 79 aa7.39□□□□□ -1.23
XRCC3-213ENST00000555451 ZNF561-AS1K7EIQ3 104 aa7.39□□□□□ -1.23
XRCC3-213ENST00000555451 IFITM1P13164 125 aa7.39□□□□□ -1.23
XRCC3-213ENST00000555451 C15orf56Q8N910 161 aa7.39□□□□□ -1.23
XRCC3-213ENST00000555451 NTN5Q8WTR8 489 aaPredicted RBP7.39□□□□□ -1.23
XRCC3-213ENST00000555451 A6NDN8 102 aa7.38□□□□□ -1.23
XRCC3-213ENST00000555451 PTTG1IPP53801 180 aa7.38□□□□□ -1.23
XRCC3-213ENST00000555451 FXYD2P54710 66 aa7.38□□□□□ -1.23
XRCC3-213ENST00000555451 C2orf82Q6UX34 121 aa7.38□□□□□ -1.23
XRCC3-213ENST00000555451 COPS9Q8WXC6 57 aa7.38□□□□□ -1.23
XRCC3-213ENST00000555451 C2orf48Q96LS8 159 aa7.38□□□□□ -1.23
XRCC3-213ENST00000555451 ERG28Q9UKR5 140 aa7.38□□□□□ -1.23
XRCC3-213ENST00000555451 LY6G6CO95867 125 aa7.37□□□□□ -1.23
XRCC3-213ENST00000555451 SMIM13P0DJ93 91 aa7.37□□□□□ -1.23
XRCC3-213ENST00000555451 RPL24P83731 157 aaKnown RBP7.37□□□□□ -1.23
XRCC3-213ENST00000555451 COX17Q14061 63 aa7.37□□□□□ -1.23
XRCC3-213ENST00000555451 HIGD2BQ4VC39 106 aa7.37□□□□□ -1.23
XRCC3-213ENST00000555451 COL5A1-AS1Q5SY13 56 aa7.37□□□□□ -1.23
XRCC3-213ENST00000555451 ADAMTSL4-AS1Q5T5F5 129 aa7.37□□□□□ -1.23
XRCC3-213ENST00000555451 PPDPFQ9H3Y8 114 aa7.37□□□□□ -1.23
XRCC3-213ENST00000555451 VPS13DQ5THJ4 4388 aa7.37□□□□□ -1.23
XRCC3-213ENST00000555451 LINC00158P58513 81 aa7.36□□□□□ -1.23
XRCC3-213ENST00000555451 MUSTN1Q8IVN3 82 aa7.36□□□□□ -1.23
XRCC3-213ENST00000555451 C6orf223Q8N319 242 aa7.36□□□□□ -1.23
XRCC3-213ENST00000555451 CAMK2N2Q96S95 79 aa7.36□□□□□ -1.23
XRCC3-213ENST00000555451 TRBV30A0A0K0K1B3 111 aa7.35□□□□□ -1.23
XRCC3-213ENST00000555451 A0A0U1RRA0 63 aa7.35□□□□□ -1.23
XRCC3-213ENST00000555451 USP17L23D6RBM5 183 aa7.35□□□□□ -1.23
XRCC3-213ENST00000555451 PSCAO43653 123 aa7.35□□□□□ -1.23
XRCC3-213ENST00000555451 UNQ6190/PRO20217Q6UXQ8 127 aa7.35□□□□□ -1.23
XRCC3-213ENST00000555451 MIR7-3HGQ8N6C7 128 aa7.35□□□□□ -1.23
XRCC3-213ENST00000555451 LINC00308Q8TCZ7 52 aa7.35□□□□□ -1.23
XRCC3-213ENST00000555451 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.34□□□□□ -1.23
XRCC3-213ENST00000555451 PFN2P35080 140 aa7.34□□□□□ -1.23
XRCC3-213ENST00000555451 DAND5Q8N907 189 aa7.34□□□□□ -1.23
XRCC3-213ENST00000555451 LINC00526Q96FQ7 95 aa7.34□□□□□ -1.23
XRCC3-213ENST00000555451 NHP2Q9NX24 153 aaKnown RBP7.34□□□□□ -1.23
XRCC3-213ENST00000555451 HERC2O95714 4834 aa7.33□□□□□ -1.24
XRCC3-213ENST00000555451 A0A1B0GWB2 263 aa7.33□□□□□ -1.24
XRCC3-213ENST00000555451 A4D1N5 150 aa7.33□□□□□ -1.24
XRCC3-213ENST00000555451 C10orf25Q5T742 122 aa7.33□□□□□ -1.24
XRCC3-213ENST00000555451 KMT2AQ03164 3969 aa7.33□□□□□ -1.24
XRCC3-213ENST00000555451 DNAH6Q9C0G6 4158 aa7.32□□□□□ -1.24
XRCC3-213ENST00000555451 NPC2P61916 151 aa7.32□□□□□ -1.24
XRCC3-213ENST00000555451 SYCNQ0VAF6 134 aa7.32□□□□□ -1.24
XRCC3-213ENST00000555451 C14orf177Q52M58 125 aa7.32□□□□□ -1.24
XRCC3-213ENST00000555451 Q6ZR54 194 aa7.32□□□□□ -1.24
XRCC3-213ENST00000555451 Q6ZRU5 148 aa7.32□□□□□ -1.24
XRCC3-213ENST00000555451 C6orf48Q9UBA6 75 aa7.32□□□□□ -1.24
XRCC3-213ENST00000555451 A0A0B4J2C4 111 aa7.31□□□□□ -1.24
XRCC3-213ENST00000555451 RNF151Q2KHN1 245 aa7.31□□□□□ -1.24
XRCC3-213ENST00000555451 SOSTDC1Q6X4U4 206 aa7.31□□□□□ -1.24
XRCC3-213ENST00000555451 CARD19Q96LW7 228 aa7.31□□□□□ -1.24
XRCC3-213ENST00000555451 LOC107984156A0A0G2JMH3 177 aa7.3□□□□□ -1.24
XRCC3-213ENST00000555451 M0R2N4 97 aa7.3□□□□□ -1.24
XRCC3-213ENST00000555451 C9orf116Q5BN46 136 aaPredicted RBP7.3□□□□□ -1.24
XRCC3-213ENST00000555451 Q6ZRN7 208 aaPredicted RBP7.3□□□□□ -1.24
XRCC3-213ENST00000555451 ARL17AQ8IVW1 177 aa7.3□□□□□ -1.24
XRCC3-213ENST00000555451 K7ERJ3 54 aa7.29□□□□□ -1.24
XRCC3-213ENST00000555451 TAX1BP3O14907 124 aa7.29□□□□□ -1.24
XRCC3-213ENST00000555451 LECT2O14960 151 aa7.29□□□□□ -1.24
XRCC3-213ENST00000555451 EIF4EBP3O60516 100 aaPredicted RBP7.29□□□□□ -1.24
XRCC3-213ENST00000555451 CFC1BP0CG36 223 aa7.29□□□□□ -1.24
XRCC3-213ENST00000555451 CFC1P0CG37 223 aa7.29□□□□□ -1.24
XRCC3-213ENST00000555451 RAB37Q96AX2 223 aa7.29□□□□□ -1.24
XRCC3-213ENST00000555451 NDUFC2-KCTD14E9PQ53 114 aa7.28□□□□□ -1.24
XRCC3-213ENST00000555451 WFDC2Q14508 124 aa7.28□□□□□ -1.24
XRCC3-213ENST00000555451 SND1-IT1Q9HBX3 110 aa7.28□□□□□ -1.24
XRCC3-213ENST00000555451 PCLOQ9Y6V0 5065 aa7.28□□□□□ -1.24
XRCC3-213ENST00000555451 LRCOL1A6NCL2 159 aa7.27□□□□□ -1.25
XRCC3-213ENST00000555451 TLX1NBP0CAT3 122 aa7.27□□□□□ -1.25
XRCC3-213ENST00000555451 PRO1854Q9UHT4 67 aa7.27□□□□□ -1.25
XRCC3-213ENST00000555451 C9orf118A6NHY6 69 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms