RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SCGB3A1Q96QR1 104 aa7.29□□□□□ -1.24
VRK1-204ENST00000555351 GEMIN7Q9H840 131 aaKnown RBP7.29□□□□□ -1.24
VRK1-204ENST00000555351 CXCL5P42830 114 aa7.28□□□□□ -1.24
VRK1-204ENST00000555351 KRTAP10-8P60410 259 aa7.28□□□□□ -1.24
VRK1-204ENST00000555351 ZC2HC1BQ5TFG8 222 aa7.28□□□□□ -1.24
VRK1-204ENST00000555351 C2orf82Q6UX34 121 aa7.28□□□□□ -1.24
VRK1-204ENST00000555351 PHF5AQ7RTV0 110 aaKnown RBP7.28□□□□□ -1.24
VRK1-204ENST00000555351 CDKN2A-AS1Q9UH64 79 aa7.28□□□□□ -1.24
VRK1-204ENST00000555351 IGLV5-45A0A087WSX0 123 aa7.27□□□□□ -1.25
VRK1-204ENST00000555351 TINCRA0A1B0GVN0 87 aa7.27□□□□□ -1.25
VRK1-204ENST00000555351 GAGE2EQ4V326 116 aa7.27□□□□□ -1.25
VRK1-204ENST00000555351 MRPL18Q9H0U6 180 aaKnown RBP7.27□□□□□ -1.25
VRK1-204ENST00000555351 GAGE2DQ9UEU5 116 aa7.27□□□□□ -1.25
VRK1-204ENST00000555351 F8VRH5 84 aa7.26□□□□□ -1.25
VRK1-204ENST00000555351 PDZD11Q5EBL8 140 aa7.26□□□□□ -1.25
VRK1-204ENST00000555351 FA2HQ7L5A8 372 aa7.26□□□□□ -1.25
VRK1-204ENST00000555351 RPS10P5Q9NQ39 176 aa7.26□□□□□ -1.25
VRK1-204ENST00000555351 HMCN2Q8NDA2 5059 aa7.25□□□□□ -1.25
VRK1-204ENST00000555351 FAM168BA1KXE4 195 aa7.25□□□□□ -1.25
VRK1-204ENST00000555351 IGLV7-43P04211 117 aa7.25□□□□□ -1.25
VRK1-204ENST00000555351 FABP9Q0Z7S8 132 aa7.25□□□□□ -1.25
VRK1-204ENST00000555351 C1orf137Q5JT78 98 aa7.25□□□□□ -1.25
VRK1-204ENST00000555351 DIRC1Q969H9 104 aa7.25□□□□□ -1.25
VRK1-204ENST00000555351 CST9LQ9H4G1 147 aa7.25□□□□□ -1.25
VRK1-204ENST00000555351 SMCO4Q9NRQ5 59 aa7.25□□□□□ -1.25
VRK1-204ENST00000555351 TOMM7Q9P0U1 55 aa7.25□□□□□ -1.25
VRK1-204ENST00000555351 SMIM1B2RUZ4 78 aa7.24□□□□□ -1.25
VRK1-204ENST00000555351 M0QXV9 152 aa7.24□□□□□ -1.25
VRK1-204ENST00000555351 PMVKQ15126 192 aa7.24□□□□□ -1.25
VRK1-204ENST00000555351 C9orf129Q5T035 196 aaKnown RBP7.24□□□□□ -1.25
VRK1-204ENST00000555351 FAM19A5Q7Z5A7 132 aaPredicted RBP7.24□□□□□ -1.25
VRK1-204ENST00000555351 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
VRK1-204ENST00000555351 LINC00469Q8N7U9 141 aa7.24□□□□□ -1.25
VRK1-204ENST00000555351 SNAPINO95295 136 aa7.22□□□□□ -1.25
VRK1-204ENST00000555351 NDUFA5Q16718 116 aa7.22□□□□□ -1.25
VRK1-204ENST00000555351 TP73-AS1Q9UF72 201 aa7.22□□□□□ -1.25
VRK1-204ENST00000555351 H3BRM9 83 aa7.21□□□□□ -1.26
VRK1-204ENST00000555351 LINC00614P0C842 121 aa7.21□□□□□ -1.26
VRK1-204ENST00000555351 UBE2BP63146 152 aa7.21□□□□□ -1.26
VRK1-204ENST00000555351 LBHQ53QV2 105 aaPredicted RBP7.21□□□□□ -1.26
VRK1-204ENST00000555351 SVBPQ8N300 66 aa7.21□□□□□ -1.26
VRK1-204ENST00000555351 C18orf32Q8TCD1 76 aa7.21□□□□□ -1.26
VRK1-204ENST00000555351 COX7B2Q8TF08 81 aa7.21□□□□□ -1.26
VRK1-204ENST00000555351 TRAPPC1Q9Y5R8 145 aa7.21□□□□□ -1.26
VRK1-204ENST00000555351 TNXBP22105 4242 aa7.2□□□□□ -1.26
VRK1-204ENST00000555351 H0Y9J4 135 aa7.2□□□□□ -1.26
VRK1-204ENST00000555351 IGLC3P0DOY3 106 aa7.2□□□□□ -1.26
VRK1-204ENST00000555351 RAB5BP61020 215 aa7.2□□□□□ -1.26
VRK1-204ENST00000555351 KRTAP11-1Q8IUC1 163 aa7.2□□□□□ -1.26
VRK1-204ENST00000555351 A0A096LNJ9 63 aa7.19□□□□□ -1.26
VRK1-204ENST00000555351 NUPR1O60356 82 aa7.19□□□□□ -1.26
VRK1-204ENST00000555351 HBDP02042 147 aa7.19□□□□□ -1.26
VRK1-204ENST00000555351 APOC3P02656 99 aa7.19□□□□□ -1.26
VRK1-204ENST00000555351 C22orf24Q9Y442 160 aa7.19□□□□□ -1.26
VRK1-204ENST00000555351 IGLV5-39A0A0G2JS06 123 aa7.18□□□□□ -1.26
VRK1-204ENST00000555351 ATP5LO75964 103 aa7.18□□□□□ -1.26
VRK1-204ENST00000555351 URB1-AS1Q96HZ7 61 aa7.18□□□□□ -1.26
VRK1-204ENST00000555351 IGLV1-50A0A075B6I6 118 aa7.17□□□□□ -1.26
VRK1-204ENST00000555351 XAGE1AQ9HD64 81 aa7.17□□□□□ -1.26
VRK1-204ENST00000555351 IGLV5-37A0A075B6J1 123 aa7.16□□□□□ -1.26
VRK1-204ENST00000555351 SPINK8P0C7L1 97 aa7.16□□□□□ -1.26
VRK1-204ENST00000555351 SFTA2Q6UW10 78 aa7.16□□□□□ -1.26
VRK1-204ENST00000555351 MRPL55Q7Z7F7 128 aaKnown RBP7.16□□□□□ -1.26
VRK1-204ENST00000555351 ZNF861PO60384 105 aa7.15□□□□□ -1.26
VRK1-204ENST00000555351 COX17Q14061 63 aa7.15□□□□□ -1.26
VRK1-204ENST00000555351 LCE2CQ5TA81 110 aa7.15□□□□□ -1.26
VRK1-204ENST00000555351 YPEL4Q96NS1 127 aa7.15□□□□□ -1.26
VRK1-204ENST00000555351 KRTAP1-4P0C5Y4 121 aa7.14□□□□□ -1.27
VRK1-204ENST00000555351 ZNF22P17026 224 aaPredicted RBP7.14□□□□□ -1.27
VRK1-204ENST00000555351 RPL13AP40429 203 aaKnown RBP7.14□□□□□ -1.27
VRK1-204ENST00000555351 CHCHD1Q96BP2 118 aaKnown RBP7.14□□□□□ -1.27
VRK1-204ENST00000555351 NDUFA6P56556 154 aa7.13□□□□□ -1.27
VRK1-204ENST00000555351 BCE1O60756 84 aa7.12□□□□□ -1.27
VRK1-204ENST00000555351 RPL28P46779 137 aaKnown RBP7.12□□□□□ -1.27
VRK1-204ENST00000555351 BAGE3Q86Y29 109 aa7.12□□□□□ -1.27
VRK1-204ENST00000555351 PRR26Q8N8Z3 221 aa7.12□□□□□ -1.27
VRK1-204ENST00000555351 LINC00167Q96N53 147 aa7.12□□□□□ -1.27
VRK1-204ENST00000555351 TRAV12-1A0A0B4J245 112 aa7.11□□□□□ -1.27
VRK1-204ENST00000555351 PMCHL1Q16048 86 aa7.11□□□□□ -1.27
VRK1-204ENST00000555351 NKAPP1Q8N9T2 125 aa7.11□□□□□ -1.27
VRK1-204ENST00000555351 C11orf86A6NJI1 115 aa7.1□□□□□ -1.27
VRK1-204ENST00000555351 ERG28Q9UKR5 140 aa7.1□□□□□ -1.27
VRK1-204ENST00000555351 TMEM170BQ5T4T1 132 aa7.09□□□□□ -1.27
VRK1-204ENST00000555351 CHTOPQ9Y3Y2 248 aaKnown RBP7.09□□□□□ -1.27
VRK1-204ENST00000555351 PFN2P35080 140 aa7.08□□□□□ -1.28
VRK1-204ENST00000555351 RPL24P83731 157 aaKnown RBP7.08□□□□□ -1.28
VRK1-204ENST00000555351 IFI27L1Q96BM0 104 aa7.08□□□□□ -1.28
VRK1-204ENST00000555351 ZNF625Q96I27 306 aaPredicted RBP7.08□□□□□ -1.28
VRK1-204ENST00000555351 SND1-IT1Q9HBX3 110 aa7.08□□□□□ -1.28
VRK1-204ENST00000555351 UBR4Q5T4S7 5183 aa7.08□□□□□ -1.28
VRK1-204ENST00000555351 TMEM223A0PJW6 202 aa7.06□□□□□ -1.28
VRK1-204ENST00000555351 RPL37AP8A6NKH3 93 aa7.06□□□□□ -1.28
VRK1-204ENST00000555351 HSBP1O75506 76 aa7.06□□□□□ -1.28
VRK1-204ENST00000555351 VPREB1P12018 145 aa7.06□□□□□ -1.28
VRK1-204ENST00000555351 KRTAP13-1Q8IUC0 172 aa7.06□□□□□ -1.28
VRK1-204ENST00000555351 GAGE10A6NGK3 116 aa7.05□□□□□ -1.28
VRK1-204ENST00000555351 LINC00587B1AMM8 73 aa7.04□□□□□ -1.28
VRK1-204ENST00000555351 CBLN2Q8IUK8 224 aa7.04□□□□□ -1.28
VRK1-204ENST00000555351 HERV-K104P63124 156 aa7.03□□□□□ -1.28
VRK1-204ENST00000555351 IGKV2-28A0A075B6P5 120 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms