RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 PRLHP81277 87 aa5.38□□□□□ -1.55
SCFD1-215ENST00000555259 C6orf226Q5I0X4 101 aa5.38□□□□□ -1.55
SCFD1-215ENST00000555259 TRBV24-1A0A075B6N3 115 aa5.37□□□□□ -1.55
SCFD1-215ENST00000555259 GHRHP01286 108 aa5.37□□□□□ -1.55
SCFD1-215ENST00000555259 MRPL51Q4U2R6 128 aaKnown RBP5.37□□□□□ -1.55
SCFD1-215ENST00000555259 Q8IZM0 81 aa5.37□□□□□ -1.55
SCFD1-215ENST00000555259 IGLV4-3A0A075B6K6 122 aa5.36□□□□□ -1.55
SCFD1-215ENST00000555259 IGKV2-28A0A075B6P5 120 aa5.36□□□□□ -1.55
SCFD1-215ENST00000555259 A0A1B0GVG6 124 aa5.36□□□□□ -1.55
SCFD1-215ENST00000555259 F8VRH5 84 aa5.36□□□□□ -1.55
SCFD1-215ENST00000555259 TNFRSF6BO95407 300 aa5.36□□□□□ -1.55
SCFD1-215ENST00000555259 IGKV2D-28P01615 120 aa5.36□□□□□ -1.55
SCFD1-215ENST00000555259 IFI27P40305 119 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-215ENST00000555259 Q6ZN92 141 aa5.36□□□□□ -1.55
SCFD1-215ENST00000555259 PLEKHB2Q96CS7 222 aa5.36□□□□□ -1.55
SCFD1-215ENST00000555259 ALKBH7Q9BT30 221 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-215ENST00000555259 SMIM2Q9BVW6 85 aa5.36□□□□□ -1.55
SCFD1-215ENST00000555259 USH2AO75445 5202 aa5.36□□□□□ -1.55
SCFD1-215ENST00000555259 SSPOA2VEC9 5147 aa5.35□□□□□ -1.55
SCFD1-215ENST00000555259 IGLV5-37A0A075B6J1 123 aa5.35□□□□□ -1.55
SCFD1-215ENST00000555259 LINC00862A6NCI5 91 aa5.35□□□□□ -1.55
SCFD1-215ENST00000555259 HMSDA8MTL9 139 aa5.35□□□□□ -1.55
SCFD1-215ENST00000555259 TAGLN2P37802 199 aaKnown RBP5.35□□□□□ -1.55
SCFD1-215ENST00000555259 RIGQ13278 110 aa5.35□□□□□ -1.55
SCFD1-215ENST00000555259 FAM104BQ5XKR9 115 aa5.35□□□□□ -1.55
SCFD1-215ENST00000555259 DAND5Q8N907 189 aa5.35□□□□□ -1.55
SCFD1-215ENST00000555259 PYGO1Q9Y3Y4 419 aa5.35□□□□□ -1.55
SCFD1-215ENST00000555259 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
SCFD1-215ENST00000555259 NKAPP1Q8N9T2 125 aa5.34□□□□□ -1.55
SCFD1-215ENST00000555259 TMEM141Q96I45 108 aa5.34□□□□□ -1.55
SCFD1-215ENST00000555259 CKS2P33552 79 aa5.33□□□□□ -1.56
SCFD1-215ENST00000555259 TEX43Q6ZNM6 134 aa5.33□□□□□ -1.56
SCFD1-215ENST00000555259 FAM19A1Q7Z5A9 133 aa5.33□□□□□ -1.56
SCFD1-215ENST00000555259 EIF5A2Q9GZV4 153 aaKnown RBP5.33□□□□□ -1.56
SCFD1-215ENST00000555259 FLGP20930 4061 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-215ENST00000555259 SCO1O75880 301 aa5.33□□□□□ -1.56
SCFD1-215ENST00000555259 SPINK1P00995 79 aa5.33□□□□□ -1.56
SCFD1-215ENST00000555259 ZC2HC1BQ5TFG8 222 aa5.33□□□□□ -1.56
SCFD1-215ENST00000555259 Q8NBF4 154 aa5.33□□□□□ -1.56
SCFD1-215ENST00000555259 C2orf88Q9BSF0 95 aa5.33□□□□□ -1.56
SCFD1-215ENST00000555259 TMEM238C9JI98 176 aa5.32□□□□□ -1.56
SCFD1-215ENST00000555259 TMEM250H0YL14 139 aa5.32□□□□□ -1.56
SCFD1-215ENST00000555259 CBLN2Q8IUK8 224 aa5.32□□□□□ -1.56
SCFD1-215ENST00000555259 TMEM126AQ9H061 195 aa5.32□□□□□ -1.56
SCFD1-215ENST00000555259 NDUFA12Q9UI09 145 aa5.32□□□□□ -1.56
SCFD1-215ENST00000555259 M0R2T5 61 aa5.31□□□□□ -1.56
SCFD1-215ENST00000555259 NPYP01303 97 aa5.31□□□□□ -1.56
SCFD1-215ENST00000555259 LINC01551Q86U37 167 aa5.31□□□□□ -1.56
SCFD1-215ENST00000555259 GNB1LQ9BYB4 327 aa5.31□□□□□ -1.56
SCFD1-215ENST00000555259 OSTCQ9NRP0 149 aa5.31□□□□□ -1.56
SCFD1-215ENST00000555259 TMEM238LA0A1B0GVL6 79 aa5.3□□□□□ -1.56
SCFD1-215ENST00000555259 D6R8Y8 96 aa5.3□□□□□ -1.56
SCFD1-215ENST00000555259 RAB5AP20339 215 aa5.3□□□□□ -1.56
SCFD1-215ENST00000555259 CXCL5P42830 114 aa5.3□□□□□ -1.56
SCFD1-215ENST00000555259 SPRR4Q96PI1 79 aa5.3□□□□□ -1.56
SCFD1-215ENST00000555259 AMELXQ99217 191 aa5.3□□□□□ -1.56
SCFD1-215ENST00000555259 HIGD2AQ9BW72 106 aa5.3□□□□□ -1.56
SCFD1-215ENST00000555259 V9GYV3 84 aa5.3□□□□□ -1.56
SCFD1-215ENST00000555259 IGLV8-61A0A075B6I0 122 aa5.29□□□□□ -1.56
SCFD1-215ENST00000555259 M0R378 163 aa5.29□□□□□ -1.56
SCFD1-215ENST00000555259 CEBPGP53567 150 aa5.29□□□□□ -1.56
SCFD1-215ENST00000555259 CDKN2A-AS1Q9UH64 79 aa5.29□□□□□ -1.56
SCFD1-215ENST00000555259 NAT8BQ9UHF3 227 aa5.29□□□□□ -1.56
SCFD1-215ENST00000555259 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
SCFD1-215ENST00000555259 FAM19A3Q7Z5A8 133 aa5.29□□□□□ -1.56
SCFD1-215ENST00000555259 Q8N377 158 aa5.29□□□□□ -1.56
SCFD1-215ENST00000555259 FAM19A2Q8N3H0 131 aa5.29□□□□□ -1.56
SCFD1-215ENST00000555259 VCX2Q9H322 139 aa5.29□□□□□ -1.56
SCFD1-215ENST00000555259 FCGBPQ9Y6R7 5405 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-215ENST00000555259 RAB5BP61020 215 aa5.28□□□□□ -1.56
SCFD1-215ENST00000555259 PCOTHQ58A44 107 aa5.28□□□□□ -1.56
SCFD1-215ENST00000555259 C2orf66Q6UXQ4 117 aa5.28□□□□□ -1.56
SCFD1-215ENST00000555259 SMIM7Q9BQ49 75 aa5.28□□□□□ -1.56
SCFD1-215ENST00000555259 MRPL18Q9H0U6 180 aaKnown RBP5.28□□□□□ -1.56
SCFD1-215ENST00000555259 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
SCFD1-215ENST00000555259 HERVK_113P63121 156 aa5.27□□□□□ -1.57
SCFD1-215ENST00000555259 A0A1B0GW15 77 aa5.26□□□□□ -1.57
SCFD1-215ENST00000555259 RPS29P62273 56 aaKnown RBP5.26□□□□□ -1.57
SCFD1-215ENST00000555259 FAM74A3Q4VXF1 159 aa5.26□□□□□ -1.57
SCFD1-215ENST00000555259 ZNF706Q9Y5V0 76 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-215ENST00000555259 SMIM1B2RUZ4 78 aa5.25□□□□□ -1.57
SCFD1-215ENST00000555259 PPBPP02775 128 aa5.25□□□□□ -1.57
SCFD1-215ENST00000555259 VPREB1P12018 145 aa5.25□□□□□ -1.57
SCFD1-215ENST00000555259 SEC11AP67812 179 aa5.25□□□□□ -1.57
SCFD1-215ENST00000555259 GEMIN7Q9H840 131 aaKnown RBP5.25□□□□□ -1.57
SCFD1-215ENST00000555259 CYSLTR1Q9Y271 337 aa5.25□□□□□ -1.57
SCFD1-215ENST00000555259 SMIM27A0A1W2PRY6 76 aa5.25□□□□□ -1.57
SCFD1-215ENST00000555259 F8W036 122 aa5.25□□□□□ -1.57
SCFD1-215ENST00000555259 SLC25A20O43772 301 aa5.25□□□□□ -1.57
SCFD1-215ENST00000555259 ORMDL3Q8N138 153 aa5.25□□□□□ -1.57
SCFD1-215ENST00000555259 COX7B2Q8TF08 81 aa5.25□□□□□ -1.57
SCFD1-215ENST00000555259 IGIPA6NJ69 53 aa5.24□□□□□ -1.57
SCFD1-215ENST00000555259 NPSP0C0P6 89 aa5.24□□□□□ -1.57
SCFD1-215ENST00000555259 PDZD11Q5EBL8 140 aa5.23□□□□□ -1.57
SCFD1-215ENST00000555259 MRPL54Q6P161 138 aaKnown RBP5.23□□□□□ -1.57
SCFD1-215ENST00000555259 PRELID3AQ96N28 172 aa5.23□□□□□ -1.57
SCFD1-215ENST00000555259 BATF3Q9NR55 127 aa5.23□□□□□ -1.57
SCFD1-215ENST00000555259 LOC389332A0A1B0GUA5 103 aa5.22□□□□□ -1.57
SCFD1-215ENST00000555259 S100A8P05109 93 aa5.22□□□□□ -1.57
SCFD1-215ENST00000555259 TMEM136Q6ZRR5 245 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms