RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 AZU1P20160 251 aa7.87□□□□□ -1.15
VPS33B-204ENST00000554660 CCL18P55774 89 aa7.87□□□□□ -1.15
VPS33B-204ENST00000554660 HERVK_113P63121 156 aa7.87□□□□□ -1.15
VPS33B-204ENST00000554660 DAZ2Q13117 558 aaKnown RBP7.87□□□□□ -1.15
VPS33B-204ENST00000554660 ATXN8Q156A1 80 aa7.87□□□□□ -1.15
VPS33B-204ENST00000554660 DAZ4Q86SG3 579 aaKnown RBP7.87□□□□□ -1.15
VPS33B-204ENST00000554660 GEMIN7Q9H840 131 aaKnown RBP7.87□□□□□ -1.15
VPS33B-204ENST00000554660 DAZ3Q9NR90 486 aaKnown RBP7.87□□□□□ -1.15
VPS33B-204ENST00000554660 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
VPS33B-204ENST00000554660 TRAV4A0A0B4J268 109 aa7.86□□□□□ -1.15
VPS33B-204ENST00000554660 IGLV5-39A0A0G2JS06 123 aa7.86□□□□□ -1.15
VPS33B-204ENST00000554660 LYRM9A8MSI8 78 aa7.86□□□□□ -1.15
VPS33B-204ENST00000554660 EPM2AB3EWF7 344 aa7.86□□□□□ -1.15
VPS33B-204ENST00000554660 H7C423 109 aa7.86□□□□□ -1.15
VPS33B-204ENST00000554660 SCGB1C2P0DMR2 95 aa7.86□□□□□ -1.15
VPS33B-204ENST00000554660 LCE2DQ5TA82 110 aaPredicted RBP7.86□□□□□ -1.15
VPS33B-204ENST00000554660 MTURNQ8N3F0 131 aa7.86□□□□□ -1.15
VPS33B-204ENST00000554660 MYCBP2O75592 4640 aa7.86□□□□□ -1.15
VPS33B-204ENST00000554660 PLAC8L1A1L4L8 177 aa7.85□□□□□ -1.15
VPS33B-204ENST00000554660 COX6CP09669 75 aa7.85□□□□□ -1.15
VPS33B-204ENST00000554660 RPL13AP40429 203 aaKnown RBP7.85□□□□□ -1.15
VPS33B-204ENST00000554660 RPL36AP83881 106 aaKnown RBP7.85□□□□□ -1.15
VPS33B-204ENST00000554660 RPL36ALQ969Q0 106 aaKnown RBP7.85□□□□□ -1.15
VPS33B-204ENST00000554660 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
VPS33B-204ENST00000554660 H3BT86 120 aa7.84□□□□□ -1.15
VPS33B-204ENST00000554660 SLC25A20O43772 301 aa7.84□□□□□ -1.15
VPS33B-204ENST00000554660 EIF4EBP3O60516 100 aaPredicted RBP7.84□□□□□ -1.15
VPS33B-204ENST00000554660 ATP5G1P05496 136 aa7.84□□□□□ -1.15
VPS33B-204ENST00000554660 CIRBPQ14011 172 aaKnown RBP7.84□□□□□ -1.15
VPS33B-204ENST00000554660 Q6ZSN1 163 aa7.84□□□□□ -1.15
VPS33B-204ENST00000554660 Q6ZUT4 128 aa7.84□□□□□ -1.15
VPS33B-204ENST00000554660 GTSF1LQ9H1H1 148 aa7.84□□□□□ -1.15
VPS33B-204ENST00000554660 TRBV10-2A0A0K0K1G8 114 aa7.83□□□□□ -1.16
VPS33B-204ENST00000554660 K7EQD1 137 aa7.83□□□□□ -1.16
VPS33B-204ENST00000554660 FUSP35637 526 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS33B-204ENST00000554660 LINC01620Q4KN68 170 aa7.83□□□□□ -1.16
VPS33B-204ENST00000554660 TTC32Q5I0X7 151 aa7.83□□□□□ -1.16
VPS33B-204ENST00000554660 CDIP1Q9H305 208 aa7.83□□□□□ -1.16
VPS33B-204ENST00000554660 Q9H8V8 135 aa7.83□□□□□ -1.16
VPS33B-204ENST00000554660 IGHV3-73A0A0B4J1V6 119 aa7.82□□□□□ -1.16
VPS33B-204ENST00000554660 A0A1B0GV72 72 aa7.82□□□□□ -1.16
VPS33B-204ENST00000554660 INAFM2P0DMQ5 153 aa7.82□□□□□ -1.16
VPS33B-204ENST00000554660 HERV-K104P63124 156 aa7.82□□□□□ -1.16
VPS33B-204ENST00000554660 DGAT2L7PQ6IED9 249 aa7.82□□□□□ -1.16
VPS33B-204ENST00000554660 ANKRD29Q8N6D5 301 aa7.82□□□□□ -1.16
VPS33B-204ENST00000554660 CARD19Q96LW7 228 aa7.82□□□□□ -1.16
VPS33B-204ENST00000554660 TRAV8-3A0A0A6YYJ7 113 aa7.81□□□□□ -1.16
VPS33B-204ENST00000554660 HTN1P15515 57 aa7.81□□□□□ -1.16
VPS33B-204ENST00000554660 Q1RN00 199 aa7.81□□□□□ -1.16
VPS33B-204ENST00000554660 C16orf74Q96GX8 76 aa7.81□□□□□ -1.16
VPS33B-204ENST00000554660 ICOSQ9Y6W8 199 aa7.81□□□□□ -1.16
VPS33B-204ENST00000554660 IGHV3-64A0A075B6Q5 118 aa7.8□□□□□ -1.16
VPS33B-204ENST00000554660 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.8□□□□□ -1.16
VPS33B-204ENST00000554660 IGKV2-29A2NJV5 120 aaPredicted RBP7.8□□□□□ -1.16
VPS33B-204ENST00000554660 C9JAW5 83 aa7.8□□□□□ -1.16
VPS33B-204ENST00000554660 DEFB104AQ8WTQ1 72 aa7.8□□□□□ -1.16
VPS33B-204ENST00000554660 TMEM101Q96IK0 257 aa7.8□□□□□ -1.16
VPS33B-204ENST00000554660 CDKN2A-AS1Q9UH64 79 aa7.8□□□□□ -1.16
VPS33B-204ENST00000554660 VPS13BQ7Z7G8 4022 aa7.8□□□□□ -1.16
VPS33B-204ENST00000554660 TRAV26-1A0A087WT03 109 aa7.79□□□□□ -1.16
VPS33B-204ENST00000554660 TRBV6-4A0A1B0GX49 114 aa7.79□□□□□ -1.16
VPS33B-204ENST00000554660 TRIAP1O43715 76 aa7.79□□□□□ -1.16
VPS33B-204ENST00000554660 SPINK8P0C7L1 97 aa7.79□□□□□ -1.16
VPS33B-204ENST00000554660 MRPL23Q16540 153 aaKnown RBP7.79□□□□□ -1.16
VPS33B-204ENST00000554660 LINC00242Q5T6M2 205 aa7.79□□□□□ -1.16
VPS33B-204ENST00000554660 Q5VSD8 79 aa7.79□□□□□ -1.16
VPS33B-204ENST00000554660 SFTA2Q6UW10 78 aa7.79□□□□□ -1.16
VPS33B-204ENST00000554660 NOP10Q9NPE3 64 aaKnown RBP7.79□□□□□ -1.16
VPS33B-204ENST00000554660 TRGV1A0A0A0MS02 117 aa7.78□□□□□ -1.16
VPS33B-204ENST00000554660 FAM240AA0A1B0GVK7 77 aa7.78□□□□□ -1.16
VPS33B-204ENST00000554660 LST1O00453 97 aa7.78□□□□□ -1.16
VPS33B-204ENST00000554660 PRSS2P07478 247 aa7.78□□□□□ -1.16
VPS33B-204ENST00000554660 ESRGQ1W209 222 aa7.78□□□□□ -1.16
VPS33B-204ENST00000554660 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
VPS33B-204ENST00000554660 UPK3BQ9BT76 320 aa7.78□□□□□ -1.16
VPS33B-204ENST00000554660 SMIM1B2RUZ4 78 aa7.77□□□□□ -1.17
VPS33B-204ENST00000554660 XGP55808 180 aa7.77□□□□□ -1.17
VPS33B-204ENST00000554660 Q6ZRN7 208 aaPredicted RBP7.77□□□□□ -1.17
VPS33B-204ENST00000554660 ZNF625Q96I27 306 aaPredicted RBP7.77□□□□□ -1.17
VPS33B-204ENST00000554660 TMEM243Q9BU79 118 aa7.77□□□□□ -1.17
VPS33B-204ENST00000554660 CDC42SE2Q9NRR3 84 aa7.77□□□□□ -1.17
VPS33B-204ENST00000554660 Q6Q795 121 aa7.76□□□□□ -1.17
VPS33B-204ENST00000554660 LINC00308Q8TCZ7 52 aa7.76□□□□□ -1.17
VPS33B-204ENST00000554660 Q9UF83 564 aa7.76□□□□□ -1.17
VPS33B-204ENST00000554660 IGHV3-38A0A0C4DH36 116 aa7.75□□□□□ -1.17
VPS33B-204ENST00000554660 GAGE7O76087 117 aa7.75□□□□□ -1.17
VPS33B-204ENST00000554660 GAGE12FP0CL80 117 aa7.75□□□□□ -1.17
VPS33B-204ENST00000554660 GAGE12GP0CL81 117 aa7.75□□□□□ -1.17
VPS33B-204ENST00000554660 GAGE12IP0CL82 117 aa7.75□□□□□ -1.17
VPS33B-204ENST00000554660 LINC00694P0DN24 101 aa7.75□□□□□ -1.17
VPS33B-204ENST00000554660 NTM-AS1Q6ZSK4 140 aa7.75□□□□□ -1.17
VPS33B-204ENST00000554660 UBE2WQ96B02 151 aa7.75□□□□□ -1.17
VPS33B-204ENST00000554660 DNAH10OSP0CZ25 163 aa7.74□□□□□ -1.17
VPS33B-204ENST00000554660 RNASE13Q5GAN3 156 aaKnown RBP7.74□□□□□ -1.17
VPS33B-204ENST00000554660 Q6ZTI0 123 aa7.74□□□□□ -1.17
VPS33B-204ENST00000554660 LINC00612Q8N6U2 182 aa7.74□□□□□ -1.17
VPS33B-204ENST00000554660 UBR4Q5T4S7 5183 aa7.73□□□□□ -1.17
VPS33B-204ENST00000554660 H7C2G1 150 aa7.73□□□□□ -1.17
VPS33B-204ENST00000554660 COX7A2LO14548 114 aa7.73□□□□□ -1.17
VPS33B-204ENST00000554660 UBE2L6O14933 153 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms