RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 KRTAP13-1Q8IUC0 172 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 CEP250Q9BV73 2442 aa2.27□□□□□ -2.05
SEC23A-207ENST00000554615 IGHV3OR16-13A0A075B7E8 117 aa2.26□□□□□ -2.05
SEC23A-207ENST00000554615 IGHV3-74A0A0B4J1X5 117 aa2.26□□□□□ -2.05
SEC23A-207ENST00000554615 IGHV3-38A0A0C4DH36 116 aa2.26□□□□□ -2.05
SEC23A-207ENST00000554615 C9JAW5 83 aa2.26□□□□□ -2.05
SEC23A-207ENST00000554615 JMJD7-PLA2G4BH0Y9G9 81 aa2.26□□□□□ -2.05
SEC23A-207ENST00000554615 UQCRQO14949 82 aa2.26□□□□□ -2.05
SEC23A-207ENST00000554615 COX7CP15954 63 aa2.26□□□□□ -2.05
SEC23A-207ENST00000554615 VPS25Q9BRG1 176 aa2.26□□□□□ -2.05
SEC23A-207ENST00000554615 LINC00588Q9Y4M8 146 aa2.26□□□□□ -2.05
SEC23A-207ENST00000554615 PRO0255Q9UI72 69 aa2.26□□□□□ -2.05
SEC23A-207ENST00000554615 LINC01556Q5JQF7 62 aa2.26□□□□□ -2.05
SEC23A-207ENST00000554615 CLEC2BQ92478 149 aa2.26□□□□□ -2.05
SEC23A-207ENST00000554615 IGSF10Q6WRI0 2623 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 APCP25054 2843 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 A0A096LPF7 62 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 ZNF561-AS1K7EIQ3 104 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 PFN2P35080 140 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 EMP1P54849 157 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 CIRBPQ14011 172 aaKnown RBP2.25□□□□□ -2.05
SEC23A-207ENST00000554615 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.25□□□□□ -2.05
SEC23A-207ENST00000554615 PRIMA1Q86XR5 153 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 Q8N3U1 123 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 DYNC1H1Q14204 4646 aaKnown RBP2.25□□□□□ -2.05
SEC23A-207ENST00000554615 PTPRQQ9UMZ3 2332 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 NRGNQ92686 78 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 FAT1Q14517 4588 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 H0Y8G0 127 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 RPL18AQ02543 176 aaKnown RBP2.25□□□□□ -2.05
SEC23A-207ENST00000554615 SCGB1D4Q6XE38 83 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 CHCHD5Q9BSY4 110 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 SND1-IT1Q9HBX3 110 aa2.25□□□□□ -2.05
SEC23A-207ENST00000554615 COX6CP09669 75 aa2.24□□□□□ -2.05
SEC23A-207ENST00000554615 PRB4P10163 310 aaPredicted RBP2.24□□□□□ -2.05
SEC23A-207ENST00000554615 TMEM256-PLSCR3K7ERE1 68 aa2.24□□□□□ -2.05
SEC23A-207ENST00000554615 TGFAP01135 160 aa2.24□□□□□ -2.05
SEC23A-207ENST00000554615 CNBPP62633 177 aaKnown RBP2.24□□□□□ -2.05
SEC23A-207ENST00000554615 DEFB136Q30KP8 78 aa2.24□□□□□ -2.05
SEC23A-207ENST00000554615 C3orf56Q8N813 242 aa2.24□□□□□ -2.05
SEC23A-207ENST00000554615 TM2D3Q9BRN9 247 aa2.24□□□□□ -2.05
SEC23A-207ENST00000554615 CEP290O15078 2479 aa2.24□□□□□ -2.05
SEC23A-207ENST00000554615 CCDC179H3BU77 68 aa2.24□□□□□ -2.05
SEC23A-207ENST00000554615 ATOX1O00244 68 aa2.24□□□□□ -2.05
SEC23A-207ENST00000554615 PRM2P04554 102 aa2.24□□□□□ -2.05
SEC23A-207ENST00000554615 MIR7-3HGQ8N6C7 128 aa2.24□□□□□ -2.05
SEC23A-207ENST00000554615 WFDC11Q8NEX6 87 aa2.24□□□□□ -2.05
SEC23A-207ENST00000554615 SETXQ7Z333 2677 aaKnown RBP2.24□□□□□ -2.05
SEC23A-207ENST00000554615 DOPEY1Q5JWR5 2465 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 GAGE12JA6NER3 117 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 GAGE7O76087 117 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 GAGE12FP0CL80 117 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 GAGE12GP0CL81 117 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 GAGE12IP0CL82 117 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 GAGE4Q13068 117 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 Q5XG85 94 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 SMIM20Q8N5G0 67 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 LINC00846Q9NV44 126 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 C6orf48Q9UBA6 75 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 BAALC-AS2P0C853 105 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 TMEM258P61165 79 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 APC2O95996 2303 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
SEC23A-207ENST00000554615 OXTP01178 125 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 LINC00483Q53H64 154 aa2.23□□□□□ -2.05
SEC23A-207ENST00000554615 NOP10Q9NPE3 64 aaKnown RBP2.23□□□□□ -2.05
SEC23A-207ENST00000554615 ARID1AO14497 2285 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 HIVEP3Q5T1R4 2406 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 SMIM29Q86T20 159 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 OCR1Q9BZK8 76 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 CYSTM1Q9H1C7 97 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 OTOGQ6ZRI0 2925 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 RPL37AP8A6NKH3 93 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 B5MCH6 92 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 PRYO14603 147 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 SERP2Q8N6R1 65 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 SPTBN2O15020 2390 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 ANKHD1Q8IWZ3 2542 aaKnown RBP2.22□□□□□ -2.05
SEC23A-207ENST00000554615 APOC4P55056 127 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 ORMDL1Q9P0S3 153 aa2.22□□□□□ -2.05
SEC23A-207ENST00000554615 ZDBF2Q9HCK1 2354 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 KRTAP10-11P60412 298 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 RPL37AP61513 92 aaKnown RBP2.21□□□□□ -2.06
SEC23A-207ENST00000554615 GAGE2BQ13066 116 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 GAGE2EQ4V326 116 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 S100A7L2Q5SY68 101 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 FAM74A4Q5TZK3 123 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 GAGE2DQ9UEU5 116 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 A0A0U1RQV1 116 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 KRTAP29-1A8MX34 341 aaPredicted RBP2.21□□□□□ -2.06
SEC23A-207ENST00000554615 ATP5EP56381 51 aaPredicted RBP2.21□□□□□ -2.06
SEC23A-207ENST00000554615 CHCHD10Q8WYQ3 142 aaPredicted RBP2.21□□□□□ -2.06
SEC23A-207ENST00000554615 PLAC8Q9NZF1 115 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 SVILO95425 2214 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 IGLV1-50A0A075B6I6 118 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 TRGV1A0A0A0MS02 117 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 TRAV13-1A0A0B4J241 112 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 F5H697 171 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 CRPP02741 224 aa2.21□□□□□ -2.06
SEC23A-207ENST00000554615 IGKV4-1P06312 121 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms