RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ASCC3Q8N3C0 2202 aaKnown RBP1.59□□□□□ -2.16
SCFD1-211ENST00000554437 KIF20BQ96Q89 1820 aa1.59□□□□□ -2.16
SCFD1-211ENST00000554437 TMEM131LA2VDJ0 1609 aa1.58□□□□□ -2.16
SCFD1-211ENST00000554437 TECTAO75443 2155 aa1.58□□□□□ -2.16
SCFD1-211ENST00000554437 A0A1B0GUT8 65 aa1.58□□□□□ -2.16
SCFD1-211ENST00000554437 UBE2DNLQ8IWF7 75 aa1.58□□□□□ -2.16
SCFD1-211ENST00000554437 NCOA6Q14686 2063 aaPredicted RBP1.58□□□□□ -2.16
SCFD1-211ENST00000554437 MED13LQ71F56 2210 aa1.58□□□□□ -2.16
SCFD1-211ENST00000554437 ATP7BP35670 1465 aa1.57□□□□□ -2.16
SCFD1-211ENST00000554437 DUOX2Q9NRD8 1548 aa1.57□□□□□ -2.16
SCFD1-211ENST00000554437 S100A3P33764 101 aa1.57□□□□□ -2.16
SCFD1-211ENST00000554437 ATP5EP2Q5VTU8 51 aa1.57□□□□□ -2.16
SCFD1-211ENST00000554437 PPRC1Q5VV67 1664 aaKnown RBP1.57□□□□□ -2.16
SCFD1-211ENST00000554437 MYO7BQ6PIF6 2116 aa1.57□□□□□ -2.16
SCFD1-211ENST00000554437 IQGAP3Q86VI3 1631 aa1.55□□□□□ -2.16
SCFD1-211ENST00000554437 SHPRHQ149N8 1683 aa1.55□□□□□ -2.16
SCFD1-211ENST00000554437 ABCA1O95477 2261 aa1.55□□□□□ -2.16
SCFD1-211ENST00000554437 FLG2Q5D862 2391 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-211ENST00000554437 A0A087WXM4 84 aa1.55□□□□□ -2.16
SCFD1-211ENST00000554437 A0A1B0GU69 56 aa1.55□□□□□ -2.16
SCFD1-211ENST00000554437 ZC3H13Q5T200 1668 aaKnown RBP1.55□□□□□ -2.16
SCFD1-211ENST00000554437 CRYBG1Q9Y4K1 1723 aa1.54□□□□□ -2.16
SCFD1-211ENST00000554437 TRBV7-4A0A0J9YYF1 115 aa1.54□□□□□ -2.16
SCFD1-211ENST00000554437 IFI27P40305 119 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-211ENST00000554437 SSBP3-AS1Q7Z2R9 100 aa1.54□□□□□ -2.16
SCFD1-211ENST00000554437 NKTRP30414 1462 aaKnown RBP1.54□□□□□ -2.16
SCFD1-211ENST00000554437 TARBP1Q13395 1621 aaKnown RBP1.54□□□□□ -2.16
SCFD1-211ENST00000554437 MYO5CQ9NQX4 1742 aa1.54□□□□□ -2.16
SCFD1-211ENST00000554437 FBN3Q75N90 2809 aa1.53□□□□□ -2.16
SCFD1-211ENST00000554437 C5P01031 1676 aa1.53□□□□□ -2.16
SCFD1-211ENST00000554437 ARL14EPLP0DKL9 152 aa1.53□□□□□ -2.16
SCFD1-211ENST00000554437 URB2Q14146 1524 aaKnown RBP1.53□□□□□ -2.16
SCFD1-211ENST00000554437 SPINK9Q5DT21 86 aa1.53□□□□□ -2.16
SCFD1-211ENST00000554437 SAMD9Q5K651 1589 aa1.53□□□□□ -2.16
SCFD1-211ENST00000554437 F5P12259 2224 aa1.52□□□□□ -2.17
SCFD1-211ENST00000554437 RGPD8O14715 1765 aaPredicted RBP1.52□□□□□ -2.17
SCFD1-211ENST00000554437 RGPD5Q99666 1765 aa1.52□□□□□ -2.17
SCFD1-211ENST00000554437 LRP6O75581 1613 aa1.52□□□□□ -2.17
SCFD1-211ENST00000554437 NHSL1Q5SYE7 1610 aa1.52□□□□□ -2.17
SCFD1-211ENST00000554437 ALKQ9UM73 1620 aa1.52□□□□□ -2.17
SCFD1-211ENST00000554437 ZFHX3Q15911 3703 aa1.52□□□□□ -2.17
SCFD1-211ENST00000554437 SCN11AQ9UI33 1791 aa1.52□□□□□ -2.17
SCFD1-211ENST00000554437 ERCC6L2Q5T890 1561 aa1.51□□□□□ -2.17
SCFD1-211ENST00000554437 NDUFB1O75438 58 aa1.51□□□□□ -2.17
SCFD1-211ENST00000554437 RGPD2P0DJD1 1756 aa1.51□□□□□ -2.17
SCFD1-211ENST00000554437 XRN1Q8IZH2 1706 aaKnown RBP1.51□□□□□ -2.17
SCFD1-211ENST00000554437 CNTRLQ7Z7A1 2325 aa1.5□□□□□ -2.17
SCFD1-211ENST00000554437 LTN1O94822 1766 aa1.5□□□□□ -2.17
SCFD1-211ENST00000554437 DEFB112Q30KQ8 113 aa1.5□□□□□ -2.17
SCFD1-211ENST00000554437 S100ZQ8WXG8 99 aa1.5□□□□□ -2.17
SCFD1-211ENST00000554437 MAGI3Q5TCQ9 1506 aa1.5□□□□□ -2.17
SCFD1-211ENST00000554437 MROH1Q8NDA8 1641 aa1.49□□□□□ -2.17
SCFD1-211ENST00000554437 SETBP1Q9Y6X0 1596 aa1.49□□□□□ -2.17
SCFD1-211ENST00000554437 KMT2BQ9UMN6 2715 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-211ENST00000554437 KDM3BQ7LBC6 1761 aa1.49□□□□□ -2.17
SCFD1-211ENST00000554437 CEP170BQ9Y4F5 1589 aaPredicted RBP1.48□□□□□ -2.17
SCFD1-211ENST00000554437 TRAV21A0A0B4J279 112 aa1.48□□□□□ -2.17
SCFD1-211ENST00000554437 PIK3C2BO00750 1634 aa1.48□□□□□ -2.17
SCFD1-211ENST00000554437 EFCAB5A4FU69 1503 aa1.47□□□□□ -2.17
SCFD1-211ENST00000554437 A0A087WWC5 75 aa1.47□□□□□ -2.17
SCFD1-211ENST00000554437 LINC00959A0A1B0GUT2 108 aa1.47□□□□□ -2.17
SCFD1-211ENST00000554437 H3BVH4 76 aa1.47□□□□□ -2.17
SCFD1-211ENST00000554437 WFDC9Q8NEX5 89 aa1.47□□□□□ -2.17
SCFD1-211ENST00000554437 GAFA1Q96PS6 74 aa1.47□□□□□ -2.17
SCFD1-211ENST00000554437 HFM1A2PYH4 1435 aa1.47□□□□□ -2.17
SCFD1-211ENST00000554437 PAPPA2Q9BXP8 1791 aa1.47□□□□□ -2.17
SCFD1-211ENST00000554437 INO80Q9ULG1 1556 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-211ENST00000554437 A0A0G2JMZ2 1700 aa1.46□□□□□ -2.18
SCFD1-211ENST00000554437 RP1L1Q8IWN7 2480 aaPredicted RBP1.46□□□□□ -2.18
SCFD1-211ENST00000554437 HELZ2Q9BYK8 2649 aaKnown RBP1.46□□□□□ -2.18
SCFD1-211ENST00000554437 DNAJC13O75165 2243 aa1.46□□□□□ -2.18
SCFD1-211ENST00000554437 IFI6P09912 130 aa1.46□□□□□ -2.18
SCFD1-211ENST00000554437 MYO7AQ13402 2215 aa1.46□□□□□ -2.18
SCFD1-211ENST00000554437 LRRC7Q96NW7 1537 aa1.45□□□□□ -2.18
SCFD1-211ENST00000554437 KIAA0556O60303 1618 aa1.45□□□□□ -2.18
SCFD1-211ENST00000554437 MADDQ8WXG6 1647 aa1.45□□□□□ -2.18
SCFD1-211ENST00000554437 A0A0D9SFI3 127 aa1.45□□□□□ -2.18
SCFD1-211ENST00000554437 COX8AP10176 69 aa1.45□□□□□ -2.18
SCFD1-211ENST00000554437 HILPDAQ9Y5L2 63 aa1.45□□□□□ -2.18
SCFD1-211ENST00000554437 CD163L1Q9NR16 1453 aa1.44□□□□□ -2.18
SCFD1-211ENST00000554437 PKD1L3Q7Z443 1732 aa1.44□□□□□ -2.18
SCFD1-211ENST00000554437 ASXL1Q8IXJ9 1541 aa1.44□□□□□ -2.18
SCFD1-211ENST00000554437 TULP4Q9NRJ4 1543 aa1.44□□□□□ -2.18
SCFD1-211ENST00000554437 TENM1Q9UKZ4 2725 aa1.44□□□□□ -2.18
SCFD1-211ENST00000554437 ZDBF2Q9HCK1 2354 aa1.43□□□□□ -2.18
SCFD1-211ENST00000554437 KRTAP10-4P60372 401 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-211ENST00000554437 TP53AIP1Q9HCN2 124 aa1.43□□□□□ -2.18
SCFD1-211ENST00000554437 SLIT1O75093 1534 aa1.43□□□□□ -2.18
SCFD1-211ENST00000554437 ARFGEF2Q9Y6D5 1785 aa1.42□□□□□ -2.18
SCFD1-211ENST00000554437 LAMC1P11047 1609 aa1.42□□□□□ -2.18
SCFD1-211ENST00000554437 USP32Q8NFA0 1604 aa1.42□□□□□ -2.18
SCFD1-211ENST00000554437 A0A0D9SG42 100 aa1.42□□□□□ -2.18
SCFD1-211ENST00000554437 COX7BP24311 80 aa1.42□□□□□ -2.18
SCFD1-211ENST00000554437 NREPQ16612 68 aa1.42□□□□□ -2.18
SCFD1-211ENST00000554437 C10orf95Q9H7T3 257 aa1.42□□□□□ -2.18
SCFD1-211ENST00000554437 GNG13Q9P2W3 67 aa1.42□□□□□ -2.18
SCFD1-211ENST00000554437 PLXNB2O15031 1838 aa1.42□□□□□ -2.18
SCFD1-211ENST00000554437 RGPD1P0DJD0 1748 aa1.41□□□□□ -2.18
SCFD1-211ENST00000554437 HMGA1P17096 107 aaKnown RBP1.41□□□□□ -2.18
SCFD1-211ENST00000554437 ATXN8Q156A1 80 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms