RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
LINC00640-201ENST00000554409 VCX2Q9H322 139 aa4.71□□□□□ -1.66
LINC00640-201ENST00000554409 PKHD1L1Q86WI1 4243 aa4.7□□□□□ -1.66
LINC00640-201ENST00000554409 MYCBP2O75592 4640 aa4.7□□□□□ -1.66
LINC00640-201ENST00000554409 HERVK_113P63121 156 aa4.7□□□□□ -1.66
LINC00640-201ENST00000554409 SEC11AP67812 179 aa4.7□□□□□ -1.66
LINC00640-201ENST00000554409 RPL18AQ02543 176 aaKnown RBP4.7□□□□□ -1.66
LINC00640-201ENST00000554409 ZC2HC1BQ5TFG8 222 aa4.7□□□□□ -1.66
LINC00640-201ENST00000554409 ERASQ7Z444 233 aa4.7□□□□□ -1.66
LINC00640-201ENST00000554409 A0A0J9YXV3 536 aa4.69□□□□□ -1.66
LINC00640-201ENST00000554409 TRBV30A0A0K0K1B3 111 aa4.69□□□□□ -1.66
LINC00640-201ENST00000554409 ATP6V1G1O75348 118 aa4.69□□□□□ -1.66
LINC00640-201ENST00000554409 SNAPINO95295 136 aa4.69□□□□□ -1.66
LINC00640-201ENST00000554409 FABP9Q0Z7S8 132 aa4.69□□□□□ -1.66
LINC00640-201ENST00000554409 NDUFA5Q16718 116 aa4.69□□□□□ -1.66
LINC00640-201ENST00000554409 C10orf25Q5T742 122 aa4.69□□□□□ -1.66
LINC00640-201ENST00000554409 UNQ6190/PRO20217Q6UXQ8 127 aa4.69□□□□□ -1.66
LINC00640-201ENST00000554409 Q8IZM0 81 aa4.69□□□□□ -1.66
LINC00640-201ENST00000554409 SVBPQ8N300 66 aa4.69□□□□□ -1.66
LINC00640-201ENST00000554409 SCGB3A1Q96QR1 104 aa4.69□□□□□ -1.66
LINC00640-201ENST00000554409 C6orf48Q9UBA6 75 aa4.69□□□□□ -1.66
LINC00640-201ENST00000554409 A0A1W2PNN7 141 aa4.68□□□□□ -1.66
LINC00640-201ENST00000554409 APOC3P02656 99 aa4.68□□□□□ -1.66
LINC00640-201ENST00000554409 C9orf116Q5BN46 136 aaPredicted RBP4.68□□□□□ -1.66
LINC00640-201ENST00000554409 Q6ZRP5 223 aa4.68□□□□□ -1.66
LINC00640-201ENST00000554409 FA2HQ7L5A8 372 aa4.68□□□□□ -1.66
LINC00640-201ENST00000554409 IGLV5-45A0A087WSX0 123 aa4.67□□□□□ -1.66
LINC00640-201ENST00000554409 TINCRA0A1B0GVN0 87 aa4.67□□□□□ -1.66
LINC00640-201ENST00000554409 S100A1P23297 94 aa4.67□□□□□ -1.66
LINC00640-201ENST00000554409 C2orf82Q6UX34 121 aa4.67□□□□□ -1.66
LINC00640-201ENST00000554409 C18orf32Q8TCD1 76 aa4.67□□□□□ -1.66
LINC00640-201ENST00000554409 GEMIN7Q9H840 131 aaKnown RBP4.67□□□□□ -1.66
LINC00640-201ENST00000554409 SMCO4Q9NRQ5 59 aa4.67□□□□□ -1.66
LINC00640-201ENST00000554409 CDKN2A-AS1Q9UH64 79 aa4.67□□□□□ -1.66
LINC00640-201ENST00000554409 TRAPPC1Q9Y5R8 145 aa4.67□□□□□ -1.66
LINC00640-201ENST00000554409 A0A096LNJ9 63 aa4.66□□□□□ -1.66
LINC00640-201ENST00000554409 NDUFC2-KCTD14E9PQ53 114 aa4.66□□□□□ -1.66
LINC00640-201ENST00000554409 PRSS2P07478 247 aa4.66□□□□□ -1.66
LINC00640-201ENST00000554409 MT1HL1P0DM35 61 aa4.66□□□□□ -1.66
LINC00640-201ENST00000554409 SPINK6Q6UWN8 80 aa4.66□□□□□ -1.66
LINC00640-201ENST00000554409 URB1-AS1Q96HZ7 61 aa4.66□□□□□ -1.66
LINC00640-201ENST00000554409 PACRGQ96M98 296 aaPredicted RBP4.66□□□□□ -1.66
LINC00640-201ENST00000554409 CST9LQ9H4G1 147 aa4.66□□□□□ -1.66
LINC00640-201ENST00000554409 SMIM1B2RUZ4 78 aa4.65□□□□□ -1.67
LINC00640-201ENST00000554409 LINC00614P0C842 121 aa4.65□□□□□ -1.67
LINC00640-201ENST00000554409 CXCL5P42830 114 aa4.65□□□□□ -1.67
LINC00640-201ENST00000554409 CKS1BP61024 79 aa4.65□□□□□ -1.67
LINC00640-201ENST00000554409 SRSF9Q13242 221 aaKnown RBP eCLIP4.65□□□□□ -1.67
LINC00640-201ENST00000554409 PMVKQ15126 192 aa4.65□□□□□ -1.67
LINC00640-201ENST00000554409 PDZD11Q5EBL8 140 aa4.65□□□□□ -1.67
LINC00640-201ENST00000554409 C6orf226Q5I0X4 101 aa4.65□□□□□ -1.67
LINC00640-201ENST00000554409 SERTAD4-AS1Q5TG53 156 aa4.65□□□□□ -1.67
LINC00640-201ENST00000554409 LINC00469Q8N7U9 141 aa4.65□□□□□ -1.67
LINC00640-201ENST00000554409 YPEL4Q96NS1 127 aa4.65□□□□□ -1.67
LINC00640-201ENST00000554409 TOMM7Q9P0U1 55 aa4.65□□□□□ -1.67
LINC00640-201ENST00000554409 FAM168BA1KXE4 195 aa4.64□□□□□ -1.67
LINC00640-201ENST00000554409 F8VRH5 84 aa4.64□□□□□ -1.67
LINC00640-201ENST00000554409 HBDP02042 147 aa4.64□□□□□ -1.67
LINC00640-201ENST00000554409 IGLC3P0DOY3 106 aa4.64□□□□□ -1.67
LINC00640-201ENST00000554409 RAB5BP61020 215 aa4.64□□□□□ -1.67
LINC00640-201ENST00000554409 ODF1Q14990 250 aa4.64□□□□□ -1.67
LINC00640-201ENST00000554409 GAGE2EQ4V326 116 aa4.64□□□□□ -1.67
LINC00640-201ENST00000554409 PHF5AQ7RTV0 110 aaKnown RBP4.64□□□□□ -1.67
LINC00640-201ENST00000554409 KRTAP7-1Q8IUC3 87 aa4.64□□□□□ -1.67
LINC00640-201ENST00000554409 GAGE2DQ9UEU5 116 aa4.64□□□□□ -1.67
LINC00640-201ENST00000554409 PSORS1C2Q9UIG4 136 aa4.64□□□□□ -1.67
LINC00640-201ENST00000554409 LRP1Q07954 4544 aaKnown RBP4.63□□□□□ -1.67
LINC00640-201ENST00000554409 C9orf129Q5T035 196 aaKnown RBP4.63□□□□□ -1.67
LINC00640-201ENST00000554409 FAM19A5Q7Z5A7 132 aaPredicted RBP4.63□□□□□ -1.67
LINC00640-201ENST00000554409 COX7B2Q8TF08 81 aa4.63□□□□□ -1.67
LINC00640-201ENST00000554409 LINC01600Q96MT4 127 aa4.63□□□□□ -1.67
LINC00640-201ENST00000554409 FAT3Q8TDW7 4589 aa4.62□□□□□ -1.67
LINC00640-201ENST00000554409 H3BRM9 83 aa4.62□□□□□ -1.67
LINC00640-201ENST00000554409 M0QXV9 152 aa4.62□□□□□ -1.67
LINC00640-201ENST00000554409 ATP5LO75964 103 aa4.62□□□□□ -1.67
LINC00640-201ENST00000554409 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
LINC00640-201ENST00000554409 REG3GQ6UW15 175 aa4.62□□□□□ -1.67
LINC00640-201ENST00000554409 HERC1Q15751 4861 aa4.62□□□□□ -1.67
LINC00640-201ENST00000554409 IGLV5-39A0A0G2JS06 123 aa4.61□□□□□ -1.67
LINC00640-201ENST00000554409 SPINK8P0C7L1 97 aa4.61□□□□□ -1.67
LINC00640-201ENST00000554409 ZNF22P17026 224 aaPredicted RBP4.61□□□□□ -1.67
LINC00640-201ENST00000554409 PMCHL1Q16048 86 aa4.61□□□□□ -1.67
LINC00640-201ENST00000554409 C1orf137Q5JT78 98 aa4.61□□□□□ -1.67
LINC00640-201ENST00000554409 KRTAP11-1Q8IUC1 163 aa4.61□□□□□ -1.67
LINC00640-201ENST00000554409 CHCHD1Q96BP2 118 aaKnown RBP4.61□□□□□ -1.67
LINC00640-201ENST00000554409 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
LINC00640-201ENST00000554409 IGLV7-43P04211 117 aa4.6□□□□□ -1.67
LINC00640-201ENST00000554409 CBLN2Q8IUK8 224 aa4.6□□□□□ -1.67
LINC00640-201ENST00000554409 TP73-AS1Q9UF72 201 aa4.6□□□□□ -1.67
LINC00640-201ENST00000554409 TRAV12-1A0A0B4J245 112 aa4.59□□□□□ -1.67
LINC00640-201ENST00000554409 NDUFA6P56556 154 aa4.59□□□□□ -1.67
LINC00640-201ENST00000554409 KRTAP10-8P60410 259 aa4.59□□□□□ -1.67
LINC00640-201ENST00000554409 UBE2BP63146 152 aa4.59□□□□□ -1.67
LINC00640-201ENST00000554409 C21orf62-AS1Q17RA5 79 aa4.59□□□□□ -1.67
LINC00640-201ENST00000554409 BAGE3Q86Y29 109 aa4.59□□□□□ -1.67
LINC00640-201ENST00000554409 XAGE1AQ9HD64 81 aa4.59□□□□□ -1.67
LINC00640-201ENST00000554409 C11orf86A6NJI1 115 aa4.58□□□□□ -1.68
LINC00640-201ENST00000554409 LBHQ53QV2 105 aaPredicted RBP4.58□□□□□ -1.68
LINC00640-201ENST00000554409 SFTA2Q6UW10 78 aa4.58□□□□□ -1.68
LINC00640-201ENST00000554409 SLC7A5P1Q8MH63 180 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms