RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 IGLV1-50A0A075B6I6 118 aa13.16□□□□□ -0.3
RCCD1-202ENST00000554302 ORMDL2Q53FV1 153 aa13.16□□□□□ -0.3
RCCD1-202ENST00000554302 Q6ZN92 141 aa13.16□□□□□ -0.3
RCCD1-202ENST00000554302 VCX2Q9H322 139 aa13.16□□□□□ -0.3
RCCD1-202ENST00000554302 MT-ND4LP03901 98 aa13.15□□□□□ -0.3
RCCD1-202ENST00000554302 UBE2BP63146 152 aa13.15□□□□□ -0.3
RCCD1-202ENST00000554302 Q8IZM0 81 aa13.13□□□□□ -0.31
RCCD1-202ENST00000554302 PRSS2P07478 247 aa13.11□□□□□ -0.31
RCCD1-202ENST00000554302 NXT2Q9NPJ8 142 aaKnown RBP13.11□□□□□ -0.31
RCCD1-202ENST00000554302 CKS1BP61024 79 aa13.1□□□□□ -0.31
RCCD1-202ENST00000554302 C6orf226Q5I0X4 101 aa13.1□□□□□ -0.31
RCCD1-202ENST00000554302 TOMM7Q9P0U1 55 aa13.1□□□□□ -0.31
RCCD1-202ENST00000554302 HERVK_113P63121 156 aa13.09□□□□□ -0.31
RCCD1-202ENST00000554302 SEC11AP67812 179 aa13.08□□□□□ -0.32
RCCD1-202ENST00000554302 TIMM17AQ99595 171 aa13.08□□□□□ -0.32
RCCD1-202ENST00000554302 ALKBH7Q9BT30 221 aaPredicted RBP13.08□□□□□ -0.32
RCCD1-202ENST00000554302 CDKN2A-AS1Q9UH64 79 aa13.08□□□□□ -0.32
RCCD1-202ENST00000554302 C22orf24Q9Y442 160 aa13.08□□□□□ -0.32
RCCD1-202ENST00000554302 PAPPA-AS1Q5QFB9 102 aa13.07□□□□□ -0.32
RCCD1-202ENST00000554302 CTDSP1Q9GZU7 261 aa13.07□□□□□ -0.32
RCCD1-202ENST00000554302 ZNF861PO60384 105 aa13.06□□□□□ -0.32
RCCD1-202ENST00000554302 G0S2P27469 103 aa13.06□□□□□ -0.32
RCCD1-202ENST00000554302 LINC00469Q8N7U9 141 aa13.06□□□□□ -0.32
RCCD1-202ENST00000554302 TOMM6Q96B49 74 aa13.06□□□□□ -0.32
RCCD1-202ENST00000554302 CARHSP1Q9Y2V2 147 aaKnown RBP13.06□□□□□ -0.32
RCCD1-202ENST00000554302 F8VRH5 84 aa13.05□□□□□ -0.32
RCCD1-202ENST00000554302 NUPR1O60356 82 aa13.05□□□□□ -0.32
RCCD1-202ENST00000554302 RPL13AP40429 203 aaKnown RBP13.05□□□□□ -0.32
RCCD1-202ENST00000554302 XAGE1AQ9HD64 81 aa13.05□□□□□ -0.32
RCCD1-202ENST00000554302 RAB14P61106 215 aa13.03□□□□□ -0.32
RCCD1-202ENST00000554302 LBHQ53QV2 105 aaPredicted RBP13.03□□□□□ -0.32
RCCD1-202ENST00000554302 TP73-AS1Q9UF72 201 aa13.03□□□□□ -0.32
RCCD1-202ENST00000554302 CXCL5P42830 114 aa13.02□□□□□ -0.33
RCCD1-202ENST00000554302 ERASQ7Z444 233 aa13.02□□□□□ -0.33
RCCD1-202ENST00000554302 GEMIN7Q9H840 131 aaKnown RBP13.02□□□□□ -0.33
RCCD1-202ENST00000554302 SMIM1B2RUZ4 78 aa13□□□□□ -0.33
RCCD1-202ENST00000554302 KIAA1644Q3SXP7 199 aa13□□□□□ -0.33
RCCD1-202ENST00000554302 IGLV5-45A0A087WSX0 123 aa12.99□□□□□ -0.33
RCCD1-202ENST00000554302 MRPL55Q7Z7F7 128 aaKnown RBP12.99□□□□□ -0.33
RCCD1-202ENST00000554302 LINC01546A6NGU7 62 aa12.98□□□□□ -0.33
RCCD1-202ENST00000554302 CLLU1Q5K131 121 aa12.98□□□□□ -0.33
RCCD1-202ENST00000554302 SCGB3A1Q96QR1 104 aa12.98□□□□□ -0.33
RCCD1-202ENST00000554302 TRAV9-1A0A075B6T8 112 aa12.97□□□□□ -0.33
RCCD1-202ENST00000554302 TINCRA0A1B0GVN0 87 aa12.97□□□□□ -0.33
RCCD1-202ENST00000554302 ADCYAP1P18509 176 aa12.97□□□□□ -0.33
RCCD1-202ENST00000554302 PDZD11Q5EBL8 140 aa12.97□□□□□ -0.33
RCCD1-202ENST00000554302 LINC01549A6NIU2 74 aa12.95□□□□□ -0.34
RCCD1-202ENST00000554302 BCE1O60756 84 aa12.95□□□□□ -0.34
RCCD1-202ENST00000554302 COX7B2Q8TF08 81 aa12.95□□□□□ -0.34
RCCD1-202ENST00000554302 MUC2Q02817 5179 aa12.94□□□□□ -0.34
RCCD1-202ENST00000554302 LINC00167Q96N53 147 aa12.93□□□□□ -0.34
RCCD1-202ENST00000554302 GNB1LQ9BYB4 327 aa12.93□□□□□ -0.34
RCCD1-202ENST00000554302 CST9LQ9H4G1 147 aa12.93□□□□□ -0.34
RCCD1-202ENST00000554302 TMEM218A2RU14 115 aa12.92□□□□□ -0.34
RCCD1-202ENST00000554302 RPL28P46779 137 aaKnown RBP12.92□□□□□ -0.34
RCCD1-202ENST00000554302 PRR4Q16378 134 aa12.92□□□□□ -0.34
RCCD1-202ENST00000554302 IGLV5-37A0A075B6J1 123 aa12.91□□□□□ -0.34
RCCD1-202ENST00000554302 A0A087X002 238 aa12.91□□□□□ -0.34
RCCD1-202ENST00000554302 UQCC3Q6UW78 93 aa12.91□□□□□ -0.34
RCCD1-202ENST00000554302 RPL37AP8A6NKH3 93 aa12.89□□□□□ -0.35
RCCD1-202ENST00000554302 PMVKQ15126 192 aa12.89□□□□□ -0.35
RCCD1-202ENST00000554302 SPINK8P0C7L1 97 aa12.88□□□□□ -0.35
RCCD1-202ENST00000554302 KRTAP13-1Q8IUC0 172 aa12.88□□□□□ -0.35
RCCD1-202ENST00000554302 SEC11CQ9BY50 192 aa12.86□□□□□ -0.35
RCCD1-202ENST00000554302 CRYGAP11844 174 aa12.85□□□□□ -0.35
RCCD1-202ENST00000554302 S100PP25815 95 aa12.85□□□□□ -0.35
RCCD1-202ENST00000554302 RAB5BP61020 215 aa12.85□□□□□ -0.35
RCCD1-202ENST00000554302 GAGE10A6NGK3 116 aa12.84□□□□□ -0.35
RCCD1-202ENST00000554302 COX19Q49B96 90 aa12.84□□□□□ -0.35
RCCD1-202ENST00000554302 TSPAN13O95857 204 aa12.83□□□□□ -0.36
RCCD1-202ENST00000554302 IGLV5-39A0A0G2JS06 123 aa12.82□□□□□ -0.36
RCCD1-202ENST00000554302 H3BRM9 83 aa12.82□□□□□ -0.36
RCCD1-202ENST00000554302 IFITM2Q01629 132 aa12.82□□□□□ -0.36
RCCD1-202ENST00000554302 FA2HQ7L5A8 372 aa12.82□□□□□ -0.36
RCCD1-202ENST00000554302 TYMSOSQ8TAI1 123 aa12.82□□□□□ -0.36
RCCD1-202ENST00000554302 ATP5LO75964 103 aa12.81□□□□□ -0.36
RCCD1-202ENST00000554302 IGLC3P0DOY3 106 aa12.81□□□□□ -0.36
RCCD1-202ENST00000554302 NKAPP1Q8N9T2 125 aa12.81□□□□□ -0.36
RCCD1-202ENST00000554302 A0A096LNJ9 63 aa12.8□□□□□ -0.36
RCCD1-202ENST00000554302 KRTAP13-2Q52LG2 175 aa12.8□□□□□ -0.36
RCCD1-202ENST00000554302 SMCO4Q9NRQ5 59 aa12.8□□□□□ -0.36
RCCD1-202ENST00000554302 ANAPC11Q9NYG5 84 aa12.8□□□□□ -0.36
RCCD1-202ENST00000554302 FABP9Q0Z7S8 132 aa12.79□□□□□ -0.36
RCCD1-202ENST00000554302 SCO1O75880 301 aa12.78□□□□□ -0.36
RCCD1-202ENST00000554302 FAM229BQ4G0N7 80 aa12.78□□□□□ -0.36
RCCD1-202ENST00000554302 UBE2AP49459 152 aa12.77□□□□□ -0.37
RCCD1-202ENST00000554302 C10orf91Q5T1B1 145 aa12.77□□□□□ -0.37
RCCD1-202ENST00000554302 URB1-AS1Q96HZ7 61 aa12.77□□□□□ -0.37
RCCD1-202ENST00000554302 IGKV2-28A0A075B6P5 120 aa12.76□□□□□ -0.37
RCCD1-202ENST00000554302 IGKV2D-28P01615 120 aa12.76□□□□□ -0.37
RCCD1-202ENST00000554302 VPREB1P12018 145 aa12.76□□□□□ -0.37
RCCD1-202ENST00000554302 ZNF22P17026 224 aaPredicted RBP12.76□□□□□ -0.37
RCCD1-202ENST00000554302 PFN2P35080 140 aa12.76□□□□□ -0.37
RCCD1-202ENST00000554302 COX17Q14061 63 aa12.74□□□□□ -0.37
RCCD1-202ENST00000554302 SND1-IT1Q9HBX3 110 aa12.74□□□□□ -0.37
RCCD1-202ENST00000554302 ERG28Q9UKR5 140 aa12.74□□□□□ -0.37
RCCD1-202ENST00000554302 RHEBQ15382 184 aa12.73□□□□□ -0.37
RCCD1-202ENST00000554302 LINC00614P0C842 121 aa12.72□□□□□ -0.37
RCCD1-202ENST00000554302 C18orf32Q8TCD1 76 aa12.72□□□□□ -0.37
RCCD1-202ENST00000554302 TMEM126AQ9H061 195 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms