RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 LINC01561Q8N1V8 128 aa12.72□□□□□ -0.37
HIF1A-206ENST00000553999 PLA2G2DQ9UNK4 145 aa12.72□□□□□ -0.37
HIF1A-206ENST00000553999 TRAPPC1Q9Y5R8 145 aa12.72□□□□□ -0.37
HIF1A-206ENST00000553999 TLX1NBP0CAT3 122 aa12.71□□□□□ -0.37
HIF1A-206ENST00000553999 SPINK6Q6UWN8 80 aa12.71□□□□□ -0.37
HIF1A-206ENST00000553999 NDUFC2-KCTD14E9PQ53 114 aa12.7□□□□□ -0.38
HIF1A-206ENST00000553999 M0QXV9 152 aa12.7□□□□□ -0.38
HIF1A-206ENST00000553999 SEC11AP67812 179 aa12.7□□□□□ -0.38
HIF1A-206ENST00000553999 PMCHL1Q16048 86 aa12.7□□□□□ -0.38
HIF1A-206ENST00000553999 C9orf129Q5T035 196 aaKnown RBP12.7□□□□□ -0.38
HIF1A-206ENST00000553999 FAM19A3Q7Z5A8 133 aa12.7□□□□□ -0.38
HIF1A-206ENST00000553999 KRTAP7-1Q8IUC3 87 aa12.7□□□□□ -0.38
HIF1A-206ENST00000553999 Q8IZM0 81 aa12.7□□□□□ -0.38
HIF1A-206ENST00000553999 LINC01546A6NGU7 62 aa12.69□□□□□ -0.38
HIF1A-206ENST00000553999 SPINK8P0C7L1 97 aa12.69□□□□□ -0.38
HIF1A-206ENST00000553999 NDUFA6P56556 154 aa12.69□□□□□ -0.38
HIF1A-206ENST00000553999 XAGE1AQ9HD64 81 aa12.69□□□□□ -0.38
HIF1A-206ENST00000553999 UBE2BP63146 152 aa12.68□□□□□ -0.38
HIF1A-206ENST00000553999 SRSF9Q13242 221 aaKnown RBP eCLIP12.68□□□□□ -0.381e-8■□□□□ 9.1
HIF1A-206ENST00000553999 NDUFA5Q16718 116 aa12.68□□□□□ -0.38
HIF1A-206ENST00000553999 CST9LQ9H4G1 147 aa12.68□□□□□ -0.38
HIF1A-206ENST00000553999 SMIM1B2RUZ4 78 aa12.67□□□□□ -0.38
HIF1A-206ENST00000553999 REG3GQ6UW15 175 aa12.67□□□□□ -0.38
HIF1A-206ENST00000553999 SNAPINO95295 136 aa12.66□□□□□ -0.38
HIF1A-206ENST00000553999 C18orf32Q8TCD1 76 aa12.66□□□□□ -0.38
HIF1A-206ENST00000553999 URB1-AS1Q96HZ7 61 aa12.66□□□□□ -0.38
HIF1A-206ENST00000553999 LINC01600Q96MT4 127 aa12.66□□□□□ -0.38
HIF1A-206ENST00000553999 TINCRA0A1B0GVN0 87 aa12.65□□□□□ -0.38
HIF1A-206ENST00000553999 PMVKQ15126 192 aa12.65□□□□□ -0.38
HIF1A-206ENST00000553999 SVBPQ8N300 66 aa12.65□□□□□ -0.38
HIF1A-206ENST00000553999 COX7B2Q8TF08 81 aa12.65□□□□□ -0.38
HIF1A-206ENST00000553999 A0A096LNJ9 63 aa12.64□□□□□ -0.39
HIF1A-206ENST00000553999 F8VRH5 84 aa12.63□□□□□ -0.39
HIF1A-206ENST00000553999 IGLV7-43P04211 117 aa12.61□□□□□ -0.39
HIF1A-206ENST00000553999 RAB5BP61020 215 aa12.61□□□□□ -0.39
HIF1A-206ENST00000553999 PDZD11Q5EBL8 140 aa12.61□□□□□ -0.39
HIF1A-206ENST00000553999 IGLV5-45A0A087WSX0 123 aa12.6□□□□□ -0.39
HIF1A-206ENST00000553999 LINC01549A6NIU2 74 aa12.6□□□□□ -0.39
HIF1A-206ENST00000553999 HBDP02042 147 aa12.6□□□□□ -0.39
HIF1A-206ENST00000553999 LINC00614P0C842 121 aa12.6□□□□□ -0.39
HIF1A-206ENST00000553999 CXCL5P42830 114 aa12.59□□□□□ -0.39
HIF1A-206ENST00000553999 HMCN2Q8NDA2 5059 aa12.57□□□□□ -0.4
HIF1A-206ENST00000553999 CBLN2Q8IUK8 224 aa12.57□□□□□ -0.4
HIF1A-206ENST00000553999 H3BRM9 83 aa12.56□□□□□ -0.4
HIF1A-206ENST00000553999 C22orf24Q9Y442 160 aa12.56□□□□□ -0.4
HIF1A-206ENST00000553999 IGLC3P0DOY3 106 aa12.55□□□□□ -0.4
HIF1A-206ENST00000553999 ZNF22P17026 224 aaPredicted RBP12.55□□□□□ -0.4
HIF1A-206ENST00000553999 KRTAP10-8P60410 259 aa12.54□□□□□ -0.4
HIF1A-206ENST00000553999 BAGE3Q86Y29 109 aa12.54□□□□□ -0.4
HIF1A-206ENST00000553999 YPEL4Q96NS1 127 aa12.54□□□□□ -0.4
HIF1A-206ENST00000553999 GAGE10A6NGK3 116 aa12.53□□□□□ -0.4
HIF1A-206ENST00000553999 PFN2P35080 140 aa12.53□□□□□ -0.4
HIF1A-206ENST00000553999 DIRC1Q969H9 104 aa12.53□□□□□ -0.4
HIF1A-206ENST00000553999 C11orf86A6NJI1 115 aa12.52□□□□□ -0.41
HIF1A-206ENST00000553999 PRR26Q8N8Z3 221 aa12.52□□□□□ -0.41
HIF1A-206ENST00000553999 RPL37AP8A6NKH3 93 aa12.51□□□□□ -0.41
HIF1A-206ENST00000553999 H0Y9J4 135 aa12.51□□□□□ -0.41
HIF1A-206ENST00000553999 ATP5LO75964 103 aa12.51□□□□□ -0.41
HIF1A-206ENST00000553999 TMEM170BQ5T4T1 132 aa12.51□□□□□ -0.41
HIF1A-206ENST00000553999 ZNF625Q96I27 306 aaPredicted RBP12.51□□□□□ -0.41
HIF1A-206ENST00000553999 SLC7A5P1Q8MH63 180 aa12.5□□□□□ -0.41
HIF1A-206ENST00000553999 TNXBP22105 4242 aa12.5□□□□□ -0.41
HIF1A-206ENST00000553999 SCO1O75880 301 aa12.49□□□□□ -0.41
HIF1A-206ENST00000553999 MRPL55Q7Z7F7 128 aaKnown RBP12.49□□□□□ -0.41
HIF1A-206ENST00000553999 LBHQ53QV2 105 aaPredicted RBP12.48□□□□□ -0.41
HIF1A-206ENST00000553999 CHTOPQ9Y3Y2 248 aaKnown RBP12.48□□□□□ -0.41
HIF1A-206ENST00000553999 IGLV5-39A0A0G2JS06 123 aa12.47□□□□□ -0.41
HIF1A-206ENST00000553999 FAM19A2Q8N3H0 131 aa12.46□□□□□ -0.41
HIF1A-206ENST00000553999 LINC00167Q96N53 147 aa12.46□□□□□ -0.41
HIF1A-206ENST00000553999 H0Y8G0 127 aa12.45□□□□□ -0.42
HIF1A-206ENST00000553999 NKAPP1Q8N9T2 125 aa12.44□□□□□ -0.42
HIF1A-206ENST00000553999 IFI27L1Q96BM0 104 aa12.44□□□□□ -0.42
HIF1A-206ENST00000553999 CHCHD1Q96BP2 118 aaKnown RBP12.44□□□□□ -0.42
HIF1A-206ENST00000553999 TRGC2P03986 189 aa12.43□□□□□ -0.42
HIF1A-206ENST00000553999 ERG28Q9UKR5 140 aa12.43□□□□□ -0.42
HIF1A-206ENST00000553999 A0A0U1RRA0 63 aa12.42□□□□□ -0.42
HIF1A-206ENST00000553999 HSBP1O75506 76 aa12.42□□□□□ -0.42
HIF1A-206ENST00000553999 TP73-AS1Q9UF72 201 aa12.42□□□□□ -0.42
HIF1A-206ENST00000553999 NUPR1O60356 82 aa12.41□□□□□ -0.42
HIF1A-206ENST00000553999 KRTAP1-4P0C5Y4 121 aa12.41□□□□□ -0.42
HIF1A-206ENST00000553999 IGKV2-28A0A075B6P5 120 aa12.4□□□□□ -0.42
HIF1A-206ENST00000553999 ZNF861PO60384 105 aa12.4□□□□□ -0.42
HIF1A-206ENST00000553999 IGKV2D-28P01615 120 aa12.4□□□□□ -0.42
HIF1A-206ENST00000553999 SND1-IT1Q9HBX3 110 aa12.4□□□□□ -0.42
HIF1A-206ENST00000553999 BCE1O60756 84 aa12.38□□□□□ -0.43
HIF1A-206ENST00000553999 SERF1AO75920 110 aa12.37□□□□□ -0.43
HIF1A-206ENST00000553999 TMEM223A0PJW6 202 aa12.36□□□□□ -0.43
HIF1A-206ENST00000553999 LINC00158P58513 81 aa12.36□□□□□ -0.43
HIF1A-206ENST00000553999 Q8NDZ9 215 aa12.36□□□□□ -0.43
HIF1A-206ENST00000553999 IGLV5-37A0A075B6J1 123 aa12.35□□□□□ -0.43
HIF1A-206ENST00000553999 TRAV12-1A0A0B4J245 112 aa12.35□□□□□ -0.43
HIF1A-206ENST00000553999 RPL28P46779 137 aaKnown RBP12.35□□□□□ -0.43
HIF1A-206ENST00000553999 UBE2AP49459 152 aa12.35□□□□□ -0.43
HIF1A-206ENST00000553999 LINC00310P59036 64 aa12.35□□□□□ -0.43
HIF1A-206ENST00000553999 VPREB1P12018 145 aa12.34□□□□□ -0.43
HIF1A-206ENST00000553999 IGLV1-50A0A075B6I6 118 aa12.33□□□□□ -0.44
HIF1A-206ENST00000553999 TMEM238C9JI98 176 aa12.32□□□□□ -0.44
HIF1A-206ENST00000553999 FABP4P15090 132 aa12.32□□□□□ -0.44
HIF1A-206ENST00000553999 ANAPC11Q9NYG5 84 aa12.32□□□□□ -0.44
HIF1A-206ENST00000553999 UBR4Q5T4S7 5183 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 957 ms