RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 KIAA1644Q3SXP7 199 aa3.99□□□□□ -1.77
FOXN3-205ENST00000553904 PDZD11Q5EBL8 140 aa3.99□□□□□ -1.77
FOXN3-205ENST00000553904 LINC00173Q6ZV60 143 aa3.99□□□□□ -1.77
FOXN3-205ENST00000553904 FA2HQ7L5A8 372 aa3.99□□□□□ -1.77
FOXN3-205ENST00000553904 LINC00469Q8N7U9 141 aa3.99□□□□□ -1.77
FOXN3-205ENST00000553904 CDKN2A-AS1Q9UH64 79 aa3.99□□□□□ -1.77
FOXN3-205ENST00000553904 VPS13BQ7Z7G8 4022 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 FAM168BA1KXE4 195 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 LINC01546A6NGU7 62 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 H0Y9J4 135 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 RPL13AP40429 203 aaKnown RBP3.98□□□□□ -1.77
FOXN3-205ENST00000553904 RAB5BP61020 215 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 FABP9Q0Z7S8 132 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 PMVKQ15126 192 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 RHEBQ15382 184 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 ZC2HC1BQ5TFG8 222 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 CST9LQ9H4G1 147 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 RPS10P5Q9NQ39 176 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 TP73-AS1Q9UF72 201 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 C22orf24Q9Y442 160 aa3.98□□□□□ -1.77
FOXN3-205ENST00000553904 ZNF861PO60384 105 aa3.97□□□□□ -1.77
FOXN3-205ENST00000553904 LINC00614P0C842 121 aa3.97□□□□□ -1.77
FOXN3-205ENST00000553904 C9orf129Q5T035 196 aaKnown RBP3.97□□□□□ -1.77
FOXN3-205ENST00000553904 COX7B2Q8TF08 81 aa3.97□□□□□ -1.77
FOXN3-205ENST00000553904 CARHSP1Q9Y2V2 147 aaKnown RBP3.97□□□□□ -1.77
FOXN3-205ENST00000553904 MYCBP2O75592 4640 aa3.96□□□□□ -1.78
FOXN3-205ENST00000553904 ATP5LO75964 103 aa3.96□□□□□ -1.78
FOXN3-205ENST00000553904 RPL28P46779 137 aaKnown RBP3.96□□□□□ -1.78
FOXN3-205ENST00000553904 NDUFA6P56556 154 aa3.96□□□□□ -1.78
FOXN3-205ENST00000553904 NDUFA5Q16718 116 aa3.96□□□□□ -1.78
FOXN3-205ENST00000553904 SFTA2Q6UW10 78 aa3.96□□□□□ -1.78
FOXN3-205ENST00000553904 MRPL55Q7Z7F7 128 aaKnown RBP3.96□□□□□ -1.78
FOXN3-205ENST00000553904 XAGE1AQ9HD64 81 aa3.96□□□□□ -1.78
FOXN3-205ENST00000553904 TRAPPC1Q9Y5R8 145 aa3.96□□□□□ -1.78
FOXN3-205ENST00000553904 IGLV5-45A0A087WSX0 123 aa3.95□□□□□ -1.78
FOXN3-205ENST00000553904 SMIM1B2RUZ4 78 aa3.95□□□□□ -1.78
FOXN3-205ENST00000553904 ADCYAP1P18509 176 aa3.95□□□□□ -1.78
FOXN3-205ENST00000553904 COX17Q14061 63 aa3.95□□□□□ -1.78
FOXN3-205ENST00000553904 COMMD7Q86VX2 200 aa3.95□□□□□ -1.78
FOXN3-205ENST00000553904 PRR26Q8N8Z3 221 aa3.95□□□□□ -1.78
FOXN3-205ENST00000553904 NKAPP1Q8N9T2 125 aa3.95□□□□□ -1.78
FOXN3-205ENST00000553904 SNAPINO95295 136 aa3.94□□□□□ -1.78
FOXN3-205ENST00000553904 RPL24P83731 157 aaKnown RBP3.94□□□□□ -1.78
FOXN3-205ENST00000553904 IFITM2Q01629 132 aa3.94□□□□□ -1.78
FOXN3-205ENST00000553904 C10orf91Q5T1B1 145 aa3.94□□□□□ -1.78
FOXN3-205ENST00000553904 KRTAP7-1Q8IUC3 87 aa3.94□□□□□ -1.78
FOXN3-205ENST00000553904 BCE1O60756 84 aa3.93□□□□□ -1.78
FOXN3-205ENST00000553904 HBDP02042 147 aa3.93□□□□□ -1.78
FOXN3-205ENST00000553904 SPINK8P0C7L1 97 aa3.93□□□□□ -1.78
FOXN3-205ENST00000553904 KRTAP11-1Q8IUC1 163 aa3.93□□□□□ -1.78
FOXN3-205ENST00000553904 SVBPQ8N300 66 aa3.93□□□□□ -1.78
FOXN3-205ENST00000553904 LINC00167Q96N53 147 aa3.93□□□□□ -1.78
FOXN3-205ENST00000553904 DNAH8Q96JB1 4490 aa3.92□□□□□ -1.78
FOXN3-205ENST00000553904 HERC1Q15751 4861 aa3.92□□□□□ -1.78
FOXN3-205ENST00000553904 LINC00587B1AMM8 73 aa3.92□□□□□ -1.78
FOXN3-205ENST00000553904 ATP6V1G1O75348 118 aa3.92□□□□□ -1.78
FOXN3-205ENST00000553904 IGLC3P0DOY3 106 aa3.92□□□□□ -1.78
FOXN3-205ENST00000553904 CRYGAP11844 174 aa3.92□□□□□ -1.78
FOXN3-205ENST00000553904 PFN2P35080 140 aa3.92□□□□□ -1.78
FOXN3-205ENST00000553904 UBE2AP49459 152 aa3.92□□□□□ -1.78
FOXN3-205ENST00000553904 BAGE3Q86Y29 109 aa3.92□□□□□ -1.78
FOXN3-205ENST00000553904 IGLV5-37A0A075B6J1 123 aa3.91□□□□□ -1.78
FOXN3-205ENST00000553904 RPL37AP8A6NKH3 93 aa3.91□□□□□ -1.78
FOXN3-205ENST00000553904 APOC3P02656 99 aa3.91□□□□□ -1.78
FOXN3-205ENST00000553904 KRTAP1-4P0C5Y4 121 aa3.91□□□□□ -1.78
FOXN3-205ENST00000553904 TMEM170BQ5T4T1 132 aa3.91□□□□□ -1.78
FOXN3-205ENST00000553904 C18orf32Q8TCD1 76 aa3.91□□□□□ -1.78
FOXN3-205ENST00000553904 CHCHD1Q96BP2 118 aaKnown RBP3.91□□□□□ -1.78
FOXN3-205ENST00000553904 IGLV5-39A0A0G2JS06 123 aa3.9□□□□□ -1.79
FOXN3-205ENST00000553904 GAGE10A6NGK3 116 aa3.9□□□□□ -1.79
FOXN3-205ENST00000553904 CTAG1AP78358 180 aa3.9□□□□□ -1.79
FOXN3-205ENST00000553904 TYMSOSQ8TAI1 123 aa3.9□□□□□ -1.79
FOXN3-205ENST00000553904 ERG28Q9UKR5 140 aa3.9□□□□□ -1.79
FOXN3-205ENST00000553904 CHTOPQ9Y3Y2 248 aaKnown RBP3.9□□□□□ -1.79
FOXN3-205ENST00000553904 ZNF22P17026 224 aaPredicted RBP3.89□□□□□ -1.79
FOXN3-205ENST00000553904 LINC00158P58513 81 aa3.89□□□□□ -1.79
FOXN3-205ENST00000553904 S100A12P80511 92 aa3.89□□□□□ -1.79
FOXN3-205ENST00000553904 PRR4Q16378 134 aa3.89□□□□□ -1.79
FOXN3-205ENST00000553904 SND1-IT1Q9HBX3 110 aa3.89□□□□□ -1.79
FOXN3-205ENST00000553904 A0A096LNJ9 63 aa3.88□□□□□ -1.79
FOXN3-205ENST00000553904 IGKV2D-26A0A0A0MRZ7 120 aa3.88□□□□□ -1.79
FOXN3-205ENST00000553904 TRAV12-1A0A0B4J245 112 aa3.88□□□□□ -1.79
FOXN3-205ENST00000553904 HSBP1O75506 76 aa3.88□□□□□ -1.79
FOXN3-205ENST00000553904 HERV-K104P63124 156 aa3.88□□□□□ -1.79
FOXN3-205ENST00000553904 PMCHL1Q16048 86 aa3.88□□□□□ -1.79
FOXN3-205ENST00000553904 FAM229BQ4G0N7 80 aa3.88□□□□□ -1.79
FOXN3-205ENST00000553904 IFI27L1Q96BM0 104 aa3.88□□□□□ -1.79
FOXN3-205ENST00000553904 ZNF625Q96I27 306 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-205ENST00000553904 MAP1LC3CQ9BXW4 147 aa3.88□□□□□ -1.79
FOXN3-205ENST00000553904 LRP1Q07954 4544 aaKnown RBP3.88□□□□□ -1.79
FOXN3-205ENST00000553904 IGKV2-28A0A075B6P5 120 aa3.87□□□□□ -1.79
FOXN3-205ENST00000553904 C11orf86A6NJI1 115 aa3.87□□□□□ -1.79
FOXN3-205ENST00000553904 IGKV2D-28P01615 120 aa3.87□□□□□ -1.79
FOXN3-205ENST00000553904 VPREB1P12018 145 aa3.87□□□□□ -1.79
FOXN3-205ENST00000553904 FAM19A1Q7Z5A9 133 aa3.87□□□□□ -1.79
FOXN3-205ENST00000553904 URB1-AS1Q96HZ7 61 aa3.87□□□□□ -1.79
FOXN3-205ENST00000553904 TMEM223A0PJW6 202 aa3.86□□□□□ -1.79
FOXN3-205ENST00000553904 M0R378 163 aa3.86□□□□□ -1.79
FOXN3-205ENST00000553904 TSPAN13O95857 204 aa3.86□□□□□ -1.79
FOXN3-205ENST00000553904 MEIG1Q5JSS6 88 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms