RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 IGHV3-16A0A0C4DH30 117 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 IGHV3-38A0A0C4DH36 116 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 LOC100131303A0A0U1RQF7 123 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 A0A0U1RQV1 116 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 KLLNB2CW77 178 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 COX7CP15954 63 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 SERF2P84101 59 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 ARL16Q0P5N6 197 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 C10orf25Q5T742 122 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 MIC13Q5XKP0 118 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 EXOC3-AS1Q8N2X6 119 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 Q8TAT8 98 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 CHCHD1Q96BP2 118 aaKnown RBP3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 MGST2Q99735 147 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 KCNIP2Q9NS61 270 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 IL36BQ9NZH7 164 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 PYGO1Q9Y3Y4 419 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 TIMM9Q9Y5J7 89 aa3.68□□□□□ -1.82
SMARCE1P3-201ENST00000553649 TRBV19A0A075B6N1 114 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 TRAV13-1A0A0B4J241 112 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 IGHV1-24A0A0C4DH33 117 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 FAM236AA0A1B0GUQ0 79 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 FAM236BA0A1B0GV22 79 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 C9JCJ5 164 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 SCGB1C2P0DMR2 95 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 PYYP10082 97 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 CFAP126Q5VTH2 177 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 Q75L30 129 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 SCXQ7RTU7 201 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 MRPL55Q7Z7F7 128 aaKnown RBP3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 ZFAND2AQ8N6M9 145 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 MRPL53Q96EL3 112 aaKnown RBP3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 FAM19A4Q96LR4 140 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 LINC01600Q96MT4 127 aa3.67□□□□□ -1.82
SMARCE1P3-201ENST00000553649 IGLV5-39A0A0G2JS06 123 aa3.66□□□□□ -1.82
SMARCE1P3-201ENST00000553649 UBE2L5PA0A1B0GUS4 154 aa3.66□□□□□ -1.82
SMARCE1P3-201ENST00000553649 FAM240AA0A1B0GVK7 77 aa3.66□□□□□ -1.82
SMARCE1P3-201ENST00000553649 A8MWL6 223 aa3.66□□□□□ -1.82
SMARCE1P3-201ENST00000553649 A8MWV9 139 aa3.66□□□□□ -1.82
SMARCE1P3-201ENST00000553649 IBA57-AS1B1ANH7 110 aa3.66□□□□□ -1.82
SMARCE1P3-201ENST00000553649 CST7O76096 145 aa3.66□□□□□ -1.82
SMARCE1P3-201ENST00000553649 CSN1S1P47710 185 aa3.66□□□□□ -1.82
SMARCE1P3-201ENST00000553649 LINC01556Q5JQF7 62 aa3.66□□□□□ -1.82
SMARCE1P3-201ENST00000553649 AMN1Q8IY45 258 aa3.66□□□□□ -1.82
SMARCE1P3-201ENST00000553649 CEND1Q8N111 149 aa3.66□□□□□ -1.82
SMARCE1P3-201ENST00000553649 MPLKIPQ8TAP9 179 aa3.66□□□□□ -1.82
SMARCE1P3-201ENST00000553649 SMIM26A0A096LP01 95 aa3.65□□□□□ -1.83
SMARCE1P3-201ENST00000553649 IGHV3-73A0A0B4J1V6 119 aa3.65□□□□□ -1.83
SMARCE1P3-201ENST00000553649 TRAV26-2A0A0B4J265 109 aa3.65□□□□□ -1.83
SMARCE1P3-201ENST00000553649 TRAV4A0A0B4J268 109 aa3.65□□□□□ -1.83
SMARCE1P3-201ENST00000553649 IGLV2-8P01709 118 aa3.65□□□□□ -1.83
SMARCE1P3-201ENST00000553649 ACYP1P07311 99 aa3.65□□□□□ -1.83
SMARCE1P3-201ENST00000553649 ZNF138P52744 262 aa3.65□□□□□ -1.83
SMARCE1P3-201ENST00000553649 MRPS36P82909 103 aaKnown RBP3.65□□□□□ -1.83
SMARCE1P3-201ENST00000553649 LINC01545Q5VT33 79 aa3.65□□□□□ -1.83
SMARCE1P3-201ENST00000553649 C9orf47Q6ZRZ4 202 aa3.65□□□□□ -1.83
SMARCE1P3-201ENST00000553649 ATOX1O00244 68 aa3.64□□□□□ -1.83
SMARCE1P3-201ENST00000553649 LEPROTL1O95214 131 aa3.64□□□□□ -1.83
SMARCE1P3-201ENST00000553649 PRSS2P07478 247 aa3.64□□□□□ -1.83
SMARCE1P3-201ENST00000553649 FGF6P10767 208 aa3.64□□□□□ -1.83
SMARCE1P3-201ENST00000553649 CXCL5P42830 114 aa3.64□□□□□ -1.83
SMARCE1P3-201ENST00000553649 HBG1P69891 147 aa3.64□□□□□ -1.83
SMARCE1P3-201ENST00000553649 HBG2P69892 147 aa3.64□□□□□ -1.83
SMARCE1P3-201ENST00000553649 PDE6HQ13956 83 aa3.64□□□□□ -1.83
SMARCE1P3-201ENST00000553649 SLC25A2Q9BXI2 301 aa3.64□□□□□ -1.83
SMARCE1P3-201ENST00000553649 TMEM14CQ9P0S9 112 aa3.64□□□□□ -1.83
SMARCE1P3-201ENST00000553649 ZNF492Q9P255 531 aa3.64□□□□□ -1.83
SMARCE1P3-201ENST00000553649 SERP1Q9Y6X1 66 aa3.64□□□□□ -1.83
SMARCE1P3-201ENST00000553649 IGKV2D-30A0A075B6S6 120 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 TRAV8-4A0A0B4J246 113 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 RBAKDNA6NC62 111 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 GNRH2O43555 120 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 P01737 135 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 Q6ZRU5 148 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 MIR17HGQ75NE6 70 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 SLC25A29Q8N8R3 303 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 NRACQ8N912 160 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 CIRBP-AS1Q8TBR5 109 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 ZC2HC1AQ96GY0 325 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 CARD19Q96LW7 228 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 CHAC1Q9BUX1 264 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 Q9UF83 564 aa3.63□□□□□ -1.83
SMARCE1P3-201ENST00000553649 IGKV2D-24A0A075B6R9 120 aa3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 TRAV8-3A0A0A6YYJ7 113 aa3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 IGKCP01834 107 aa3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 RPL37AP61513 92 aaKnown RBP3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 NPC2P61916 151 aa3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 RHOHQ15669 191 aa3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 DAZ4Q86SG3 579 aaKnown RBP3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 FMC1Q96HJ9 113 aa3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 URB1-AS1Q96HZ7 61 aa3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 FAM167A-AS1Q96KT0 104 aa3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 CHCHD5Q9BSY4 110 aa3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 PAXXQ9BUH6 204 aa3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 DAZ3Q9NR90 486 aaKnown RBP3.62□□□□□ -1.83
SMARCE1P3-201ENST00000553649 CTXND1A0A1B0GTU2 59 aa3.61□□□□□ -1.83
SMARCE1P3-201ENST00000553649 F2Z2F3 143 aa3.61□□□□□ -1.83
SMARCE1P3-201ENST00000553649 IGLV2-11P01706 119 aa3.61□□□□□ -1.83
SMARCE1P3-201ENST00000553649 UBE2L3P68036 154 aaKnown RBP3.61□□□□□ -1.83
SMARCE1P3-201ENST00000553649 LAGE3Q14657 143 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms