RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 C6orf201Q7Z4U5 140 aa0.45□□□□□ -2.34
PCNX4-206ENST00000553513 FXYD6Q9H0Q3 95 aa0.45□□□□□ -2.34
PCNX4-206ENST00000553513 CELSR2Q9HCU4 2923 aa0.45□□□□□ -2.34
PCNX4-206ENST00000553513 NLRP1Q9C000 1473 aa0.44□□□□□ -2.34
PCNX4-206ENST00000553513 LEPROTL1O95214 131 aa0.44□□□□□ -2.34
PCNX4-206ENST00000553513 ALKAL2Q6UX46 152 aa0.44□□□□□ -2.34
PCNX4-206ENST00000553513 ANK2Q01484 3957 aa0.44□□□□□ -2.34
PCNX4-206ENST00000553513 A0A0G2JMZ2 1700 aa0.44□□□□□ -2.34
PCNX4-206ENST00000553513 AKAP12Q02952 1782 aa0.43□□□□□ -2.34
PCNX4-206ENST00000553513 TRBV7-7A0A0K0K1E9 115 aa0.43□□□□□ -2.34
PCNX4-206ENST00000553513 DEFB123Q8N688 67 aa0.43□□□□□ -2.34
PCNX4-206ENST00000553513 XRN1Q8IZH2 1706 aaKnown RBP0.43□□□□□ -2.34
PCNX4-206ENST00000553513 DNAJC13O75165 2243 aa0.42□□□□□ -2.34
PCNX4-206ENST00000553513 PLEKHH2Q8IVE3 1493 aa0.42□□□□□ -2.34
PCNX4-206ENST00000553513 D6R8Y8 96 aa0.42□□□□□ -2.34
PCNX4-206ENST00000553513 MUSTN1Q8IVN3 82 aa0.42□□□□□ -2.34
PCNX4-206ENST00000553513 PPRC1Q5VV67 1664 aaKnown RBP0.42□□□□□ -2.34
PCNX4-206ENST00000553513 PTPRQQ9UMZ3 2332 aa0.42□□□□□ -2.34
PCNX4-206ENST00000553513 ZFHX3Q15911 3703 aa0.41□□□□□ -2.34
PCNX4-206ENST00000553513 KNDC1Q76NI1 1749 aa0.41□□□□□ -2.34
PCNX4-206ENST00000553513 AKAP6Q13023 2319 aa0.41□□□□□ -2.34
PCNX4-206ENST00000553513 SPINK4O60575 86 aa0.41□□□□□ -2.34
PCNX4-206ENST00000553513 CRIPTQ9P021 101 aa0.41□□□□□ -2.34
PCNX4-206ENST00000553513 CHD9Q3L8U1 2897 aa0.41□□□□□ -2.34
PCNX4-206ENST00000553513 BAZ1AQ9NRL2 1556 aaPredicted RBP0.4□□□□□ -2.34
PCNX4-206ENST00000553513 CLTCQ00610 1675 aaKnown RBP0.4□□□□□ -2.34
PCNX4-206ENST00000553513 ZNF292O60281 2723 aa0.4□□□□□ -2.35
PCNX4-206ENST00000553513 TULP4Q9NRJ4 1543 aa0.4□□□□□ -2.35
PCNX4-206ENST00000553513 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
PCNX4-206ENST00000553513 PEA15Q15121 130 aa0.4□□□□□ -2.35
PCNX4-206ENST00000553513 V9GYS6 101 aa0.4□□□□□ -2.35
PCNX4-206ENST00000553513 MARF1Q9Y4F3 1742 aaKnown RBP0.4□□□□□ -2.35
PCNX4-206ENST00000553513 MUC5BQ9HC84 5762 aaPredicted RBP0.39□□□□□ -2.35
PCNX4-206ENST00000553513 TSC2P49815 1807 aa0.39□□□□□ -2.35
PCNX4-206ENST00000553513 F8WEM9 126 aa0.39□□□□□ -2.35
PCNX4-206ENST00000553513 K7EQZ3 153 aa0.39□□□□□ -2.35
PCNX4-206ENST00000553513 SPRR1BP22528 89 aa0.39□□□□□ -2.35
PCNX4-206ENST00000553513 NRXN1Q9ULB1 1477 aa0.39□□□□□ -2.35
PCNX4-206ENST00000553513 OTOGQ6ZRI0 2925 aa0.38□□□□□ -2.35
PCNX4-206ENST00000553513 NCOR2Q9Y618 2525 aa0.38□□□□□ -2.35
PCNX4-206ENST00000553513 ANKRD26Q9UPS8 1709 aa0.38□□□□□ -2.35
PCNX4-206ENST00000553513 MYH4Q9Y623 1939 aa0.37□□□□□ -2.35
PCNX4-206ENST00000553513 I3L3M4 83 aa0.37□□□□□ -2.35
PCNX4-206ENST00000553513 C20orf78Q9BR46 151 aa0.37□□□□□ -2.35
PCNX4-206ENST00000553513 PSENENQ9NZ42 101 aa0.37□□□□□ -2.35
PCNX4-206ENST00000553513 HIGD1BQ9P298 99 aa0.37□□□□□ -2.35
PCNX4-206ENST00000553513 EPRSP07814 1512 aaKnown RBP0.37□□□□□ -2.35
PCNX4-206ENST00000553513 SYNE1Q8NF91 8797 aaKnown RBP0.37□□□□□ -2.35
PCNX4-206ENST00000553513 ANKRD36A6QL64 1941 aa0.36□□□□□ -2.35
PCNX4-206ENST00000553513 PKD1L2Q7Z442 2459 aa0.36□□□□□ -2.35
PCNX4-206ENST00000553513 ANKRD17O75179 2603 aaKnown RBP0.36□□□□□ -2.35
PCNX4-206ENST00000553513 FAT4Q6V0I7 4981 aa0.36□□□□□ -2.35
PCNX4-206ENST00000553513 EDC4Q6P2E9 1401 aaKnown RBP0.36□□□□□ -2.35
PCNX4-206ENST00000553513 ATP10BO94823 1461 aa0.35□□□□□ -2.35
PCNX4-206ENST00000553513 DEFB105AQ8NG35 78 aa0.35□□□□□ -2.35
PCNX4-206ENST00000553513 SPTBN1Q01082 2364 aaKnown RBP0.35□□□□□ -2.35
PCNX4-206ENST00000553513 CACNA1AO00555 2505 aa0.35□□□□□ -2.35
PCNX4-206ENST00000553513 MON2Q7Z3U7 1717 aa0.35□□□□□ -2.35
PCNX4-206ENST00000553513 FANCAO15360 1455 aa0.35□□□□□ -2.35
PCNX4-206ENST00000553513 RGPD4Q7Z3J3 1758 aa0.34□□□□□ -2.35
PCNX4-206ENST00000553513 SHPRHQ149N8 1683 aa0.34□□□□□ -2.35
PCNX4-206ENST00000553513 KIF20BQ96Q89 1820 aa0.34□□□□□ -2.35
PCNX4-206ENST00000553513 URB1O60287 2271 aaKnown RBP0.34□□□□□ -2.35
PCNX4-206ENST00000553513 LOC730098B7Z3J9 87 aa0.34□□□□□ -2.36
PCNX4-206ENST00000553513 IQSEC2Q5JU85 1478 aa0.34□□□□□ -2.36
PCNX4-206ENST00000553513 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
PCNX4-206ENST00000553513 PAPPA2Q9BXP8 1791 aa0.33□□□□□ -2.36
PCNX4-206ENST00000553513 CPSF4LA6NMK7 179 aaKnown RBP0.33□□□□□ -2.36
PCNX4-206ENST00000553513 PYY3Q5JQD4 70 aa0.33□□□□□ -2.36
PCNX4-206ENST00000553513 KIAA0556O60303 1618 aa0.33□□□□□ -2.36
PCNX4-206ENST00000553513 TARBP1Q13395 1621 aaKnown RBP0.33□□□□□ -2.36
PCNX4-206ENST00000553513 MDN1Q9NU22 5596 aa0.33□□□□□ -2.36
PCNX4-206ENST00000553513 C5P01031 1676 aa0.33□□□□□ -2.36
PCNX4-206ENST00000553513 GPR98Q8WXG9 6306 aa0.33□□□□□ -2.36
PCNX4-206ENST00000553513 RGPD3A6NKT7 1758 aaPredicted RBP0.32□□□□□ -2.36
PCNX4-206ENST00000553513 COL14A1Q05707 1796 aaKnown RBP0.32□□□□□ -2.36
PCNX4-206ENST00000553513 TROQ12816 1431 aaPredicted RBP0.32□□□□□ -2.36
PCNX4-206ENST00000553513 SPTY2D1-AS1A0A0U1RR47 76 aa0.32□□□□□ -2.36
PCNX4-206ENST00000553513 PVALEFA0A1B0GWK0 134 aa0.32□□□□□ -2.36
PCNX4-206ENST00000553513 HMGN2P05204 90 aaKnown RBP0.32□□□□□ -2.36
PCNX4-206ENST00000553513 APLNQ9ULZ1 77 aa0.32□□□□□ -2.36
PCNX4-206ENST00000553513 GVINP1Q7Z2Y8 2422 aa0.32□□□□□ -2.36
PCNX4-206ENST00000553513 COL6A3P12111 3177 aa0.31□□□□□ -2.36
PCNX4-206ENST00000553513 LRRC37AA6NMS7 1700 aa0.31□□□□□ -2.36
PCNX4-206ENST00000553513 CUX1P39880 1505 aa0.31□□□□□ -2.36
PCNX4-206ENST00000553513 LRP1Q07954 4544 aaKnown RBP0.31□□□□□ -2.36
PCNX4-206ENST00000553513 UBR4Q5T4S7 5183 aa0.3□□□□□ -2.36
PCNX4-206ENST00000553513 WNK2Q9Y3S1 2297 aa0.3□□□□□ -2.36
PCNX4-206ENST00000553513 PPLO60437 1756 aa0.3□□□□□ -2.36
PCNX4-206ENST00000553513 CSMD3Q7Z407 3707 aa0.3□□□□□ -2.36
PCNX4-206ENST00000553513 MAST4O15021 2626 aa0.3□□□□□ -2.36
PCNX4-206ENST00000553513 IGSF10Q6WRI0 2623 aa0.3□□□□□ -2.36
PCNX4-206ENST00000553513 CYB5AP00167 134 aa0.3□□□□□ -2.36
PCNX4-206ENST00000553513 PLGLAQ15195 96 aa0.3□□□□□ -2.36
PCNX4-206ENST00000553513 DEFB112Q30KQ8 113 aa0.3□□□□□ -2.36
PCNX4-206ENST00000553513 S100A16Q96FQ6 103 aaKnown RBP0.3□□□□□ -2.36
PCNX4-206ENST00000553513 UBR3Q6ZT12 1888 aa0.3□□□□□ -2.36
PCNX4-206ENST00000553513 FMN2Q9NZ56 1722 aa0.3□□□□□ -2.36
PCNX4-206ENST00000553513 SMARCA2P51531 1590 aa0.29□□□□□ -2.36
PCNX4-206ENST00000553513 TTC37Q6PGP7 1564 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms