RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 DEFA4P12838 97 aa3.47□□□□□ -1.85
PFDN5-219ENST00000553171 NANOS2P60321 138 aaKnown RBP3.47□□□□□ -1.85
PFDN5-219ENST00000553171 REG3AQ06141 175 aa3.47□□□□□ -1.85
PFDN5-219ENST00000553171 ZNF833PQ6ZTB9 187 aa3.47□□□□□ -1.85
PFDN5-219ENST00000553171 LIMD2Q9BT23 127 aa3.47□□□□□ -1.85
PFDN5-219ENST00000553171 TTTY12Q9BZ98 90 aa3.47□□□□□ -1.85
PFDN5-219ENST00000553171 C11orf21Q9P2W6 132 aa3.47□□□□□ -1.85
PFDN5-219ENST00000553171 ARHGAP21Q5T5U3 1957 aa3.47□□□□□ -1.85
PFDN5-219ENST00000553171 IGKV1OR2-108A0A075B7D4 117 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 TRAV22A0A0B4J277 110 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV4-28A0A0C4DH34 117 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 hDV103S1A0JD37 113 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 HCG22E2RYF7 251 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 PPP1R17O96001 155 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 IGLV1-44P01699 117 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 SAA2P0DJI9 122 aaPredicted RBP3.46□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV1-2P23083 117 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 ZNF137PP52743 207 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 FAM229BQ4G0N7 80 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 SPINK9Q5DT21 86 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 FAM53AQ6NSI3 398 aaPredicted RBP3.46□□□□□ -1.86
PFDN5-219ENST00000553171 Q6ZRP5 223 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 SPTSSBQ8NFR3 76 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 UBALD1Q8TB05 177 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 FAM168AQ92567 244 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 CELA1Q9UNI1 258 aa3.46□□□□□ -1.86
PFDN5-219ENST00000553171 SRRM2Q9UQ35 2752 aaKnown RBP3.46□□□□□ -1.86
PFDN5-219ENST00000553171 A0A096LNJ9 63 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV3-43A0A0B4J1X8 118 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV3-16A0A0C4DH30 117 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 DNAL4O96015 105 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 PRSS2P07478 247 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 FXYD7P58549 80 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 DSCR9P59020 149 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 C17orf58Q2M2W7 97 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 RPL39P5Q59GN2 51 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 C9orf116Q5BN46 136 aaPredicted RBP3.45□□□□□ -1.86
PFDN5-219ENST00000553171 Q6ZR03 302 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 Q86TA4 180 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 TMEM61Q8N0U2 210 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 TMEM263Q8WUH6 116 aaKnown RBP3.45□□□□□ -1.86
PFDN5-219ENST00000553171 DOCK7Q96N67 2140 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 RETNLBQ9BQ08 111 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 CNFNQ9BYD5 112 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 SND1-IT1Q9HBX3 110 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 DNAH3Q8TD57 4116 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 DNAH7Q8WXX0 4024 aa3.45□□□□□ -1.86
PFDN5-219ENST00000553171 TANC2Q9HCD6 1990 aa3.44□□□□□ -1.86
PFDN5-219ENST00000553171 TRAV12-1A0A0B4J245 112 aa3.44□□□□□ -1.86
PFDN5-219ENST00000553171 SDHAF1A6NFY7 115 aa3.44□□□□□ -1.86
PFDN5-219ENST00000553171 F8W735 103 aaPredicted RBP3.44□□□□□ -1.86
PFDN5-219ENST00000553171 K7EQD1 137 aa3.44□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV3-48P01763 117 aa3.44□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV4-30-4P0DP06 118 aa3.44□□□□□ -1.86
PFDN5-219ENST00000553171 Q1RN00 199 aa3.44□□□□□ -1.86
PFDN5-219ENST00000553171 C15orf32Q32M92 178 aa3.44□□□□□ -1.86
PFDN5-219ENST00000553171 SPINK14Q6IE38 97 aa3.44□□□□□ -1.86
PFDN5-219ENST00000553171 SFTA2Q6UW10 78 aa3.44□□□□□ -1.86
PFDN5-219ENST00000553171 MUC2Q02817 5179 aa3.43□□□□□ -1.86
PFDN5-219ENST00000553171 IGKV1D-37A0A075B6S9 117 aa3.43□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV7-81A0A0B4J1V7 117 aa3.43□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV3-72A0A0B4J1Y9 119 aa3.43□□□□□ -1.86
PFDN5-219ENST00000553171 KRTAP16-1A8MUX0 517 aa3.43□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV3-30P01768 117 aa3.43□□□□□ -1.86
PFDN5-219ENST00000553171 PRSS1P07477 247 aa3.43□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV3-30-5P0DP03 117 aa3.43□□□□□ -1.86
PFDN5-219ENST00000553171 Q5VV11 94 aa3.43□□□□□ -1.86
PFDN5-219ENST00000553171 C9orf106Q8NAJ2 232 aa3.43□□□□□ -1.86
PFDN5-219ENST00000553171 B9D2Q9BPU9 175 aa3.43□□□□□ -1.86
PFDN5-219ENST00000553171 LINC00467Q9BRT7 94 aa3.43□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV3OR16-10A0A075B7F0 116 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 IGKV3D-20A0A0C4DH25 116 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV4-61A0A0C4DH41 118 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 C11orf86A6NJI1 115 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 D6R8Y8 96 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 CHKB-CPT1BH3BT56 60 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 IGLV2-11P01706 119 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV4-59P01825 116 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 ARMS2P0C7Q2 107 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 CASC2Q6XLA1 102 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 Q6ZTC4 211 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 FAM104AQ969W3 186 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 TTTY13Q9BZ97 58 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 KAAG1Q9UBP8 84 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 TIMM8BQ9Y5J9 83 aaPredicted RBP3.42□□□□□ -1.86
PFDN5-219ENST00000553171 ICOSQ9Y6W8 199 aa3.42□□□□□ -1.86
PFDN5-219ENST00000553171 IGKV3D-7A0A0C4DH55 119 aa3.41□□□□□ -1.86
PFDN5-219ENST00000553171 H3BRN7 92 aa3.41□□□□□ -1.86
PFDN5-219ENST00000553171 K7EIL1 84 aa3.41□□□□□ -1.86
PFDN5-219ENST00000553171 TSPEAR-AS2P59090 65 aa3.41□□□□□ -1.86
PFDN5-219ENST00000553171 WT1-ASQ06250 92 aa3.41□□□□□ -1.86
PFDN5-219ENST00000553171 LYZL1Q6UWQ5 148 aa3.41□□□□□ -1.86
PFDN5-219ENST00000553171 LENEPQ9Y5L5 61 aa3.41□□□□□ -1.86
PFDN5-219ENST00000553171 TET2Q6N021 2002 aaPredicted RBP3.41□□□□□ -1.86
PFDN5-219ENST00000553171 AGRNO00468 2067 aa3.4□□□□□ -1.86
PFDN5-219ENST00000553171 IGHV4-4A0A075B6R2 117 aa3.4□□□□□ -1.87
PFDN5-219ENST00000553171 IGLV5-45A0A087WSX0 123 aa3.4□□□□□ -1.87
PFDN5-219ENST00000553171 A0A087WVE0 104 aa3.4□□□□□ -1.87
PFDN5-219ENST00000553171 TRBV6-8A0A0A6YYG3 113 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 1542.5 ms