RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 A0A1B0GV90 55 aa6.65□□□□□ -1.34
TMEM116-216ENST00000552800 SMIM13P0DJ93 91 aa6.65□□□□□ -1.34
TMEM116-216ENST00000552800 ENHOQ6UWT2 76 aa6.65□□□□□ -1.34
TMEM116-216ENST00000552800 ARL17AQ8IVW1 177 aa6.65□□□□□ -1.34
TMEM116-216ENST00000552800 Q8IZM0 81 aa6.65□□□□□ -1.34
TMEM116-216ENST00000552800 LINC00269Q8N2A0 174 aa6.65□□□□□ -1.34
TMEM116-216ENST00000552800 KLK5Q9Y337 293 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-216ENST00000552800 C9orf118A6NHY6 69 aa6.64□□□□□ -1.35
TMEM116-216ENST00000552800 PRB2P02812 416 aaPredicted RBP6.64□□□□□ -1.35
TMEM116-216ENST00000552800 HTN3P15516 51 aa6.64□□□□□ -1.35
TMEM116-216ENST00000552800 SRSF9Q13242 221 aaKnown RBP eCLIP6.64□□□□□ -1.35
TMEM116-216ENST00000552800 CIRBPQ14011 172 aaKnown RBP6.64□□□□□ -1.35
TMEM116-216ENST00000552800 KIAA0087Q14695 138 aa6.64□□□□□ -1.35
TMEM116-216ENST00000552800 MIAQ16674 131 aa6.64□□□□□ -1.35
TMEM116-216ENST00000552800 KRTAP26-1Q6PEX3 210 aa6.64□□□□□ -1.35
TMEM116-216ENST00000552800 MUC7Q8TAX7 377 aa6.64□□□□□ -1.35
TMEM116-216ENST00000552800 IGHV3-64A0A075B6Q5 118 aa6.63□□□□□ -1.35
TMEM116-216ENST00000552800 GCSHP23434 173 aa6.63□□□□□ -1.35
TMEM116-216ENST00000552800 CXCL5P42830 114 aa6.63□□□□□ -1.35
TMEM116-216ENST00000552800 FOXI1Q12951 378 aa6.63□□□□□ -1.35
TMEM116-216ENST00000552800 BATFQ16520 125 aa6.63□□□□□ -1.35
TMEM116-216ENST00000552800 ADAMTSL4-AS1Q5T5F5 129 aa6.63□□□□□ -1.35
TMEM116-216ENST00000552800 COX7B2Q8TF08 81 aa6.63□□□□□ -1.35
TMEM116-216ENST00000552800 COPS9Q8WXC6 57 aa6.63□□□□□ -1.35
TMEM116-216ENST00000552800 A0A0B4J2C4 111 aa6.62□□□□□ -1.35
TMEM116-216ENST00000552800 IBA57-AS1B1ANH7 110 aa6.62□□□□□ -1.35
TMEM116-216ENST00000552800 F8WDY8 70 aa6.62□□□□□ -1.35
TMEM116-216ENST00000552800 ANGP03950 147 aaKnown RBP6.62□□□□□ -1.35
TMEM116-216ENST00000552800 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
TMEM116-216ENST00000552800 COX17Q14061 63 aa6.62□□□□□ -1.35
TMEM116-216ENST00000552800 MRAPQ8TCY5 172 aa6.62□□□□□ -1.35
TMEM116-216ENST00000552800 CHCHD10Q8WYQ3 142 aaPredicted RBP6.62□□□□□ -1.35
TMEM116-216ENST00000552800 Q9H8V8 135 aa6.62□□□□□ -1.35
TMEM116-216ENST00000552800 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.61□□□□□ -1.35
TMEM116-216ENST00000552800 CFC1BP0CG36 223 aa6.61□□□□□ -1.35
TMEM116-216ENST00000552800 CFC1P0CG37 223 aa6.61□□□□□ -1.35
TMEM116-216ENST00000552800 GVQW2A0A096LPI5 108 aaPredicted RBP6.6□□□□□ -1.35
TMEM116-216ENST00000552800 COX7A2LO14548 114 aa6.6□□□□□ -1.35
TMEM116-216ENST00000552800 MUSTN1Q8IVN3 82 aa6.6□□□□□ -1.35
TMEM116-216ENST00000552800 COL7A1Q02388 2944 aa6.59□□□□□ -1.35
TMEM116-216ENST00000552800 IGLL5B9A064 214 aa6.59□□□□□ -1.35
TMEM116-216ENST00000552800 APOMO95445 188 aa6.59□□□□□ -1.35
TMEM116-216ENST00000552800 UBE2V1Q13404 147 aa6.59□□□□□ -1.35
TMEM116-216ENST00000552800 C5orf38Q86SI9 138 aa6.59□□□□□ -1.35
TMEM116-216ENST00000552800 WFDC10BQ8IUB3 73 aa6.59□□□□□ -1.35
TMEM116-216ENST00000552800 KLK12Q9UKR0 248 aa6.59□□□□□ -1.35
TMEM116-216ENST00000552800 LINC00588Q9Y4M8 146 aa6.59□□□□□ -1.35
TMEM116-216ENST00000552800 A4D1N5 150 aa6.58□□□□□ -1.36
TMEM116-216ENST00000552800 PRSS2P07478 247 aa6.58□□□□□ -1.36
TMEM116-216ENST00000552800 XCL1P47992 114 aa6.58□□□□□ -1.36
TMEM116-216ENST00000552800 CCL18P55774 89 aa6.58□□□□□ -1.36
TMEM116-216ENST00000552800 C6orf226Q5I0X4 101 aa6.58□□□□□ -1.36
TMEM116-216ENST00000552800 MEIG1Q5JSS6 88 aa6.58□□□□□ -1.36
TMEM116-216ENST00000552800 LINC00308Q8TCZ7 52 aa6.58□□□□□ -1.36
TMEM116-216ENST00000552800 NHP2Q9NX24 153 aaKnown RBP6.58□□□□□ -1.36
TMEM116-216ENST00000552800 APLNQ9ULZ1 77 aa6.58□□□□□ -1.36
TMEM116-216ENST00000552800 A0A1W2PPM0 123 aa6.57□□□□□ -1.36
TMEM116-216ENST00000552800 PRO1854Q9UHT4 67 aa6.57□□□□□ -1.36
TMEM116-216ENST00000552800 IGHV3-33P01772 117 aa6.56□□□□□ -1.36
TMEM116-216ENST00000552800 C2orf48Q96LS8 159 aa6.56□□□□□ -1.36
TMEM116-216ENST00000552800 DNAH7Q8WXX0 4024 aa6.55□□□□□ -1.36
TMEM116-216ENST00000552800 STAB2Q8WWQ8 2551 aa6.55□□□□□ -1.36
TMEM116-216ENST00000552800 IGKV3OR2-268A0A0C4DH90 116 aa6.55□□□□□ -1.36
TMEM116-216ENST00000552800 GAGE12HA6NDE8 117 aa6.55□□□□□ -1.36
TMEM116-216ENST00000552800 NTN5Q8WTR8 489 aaPredicted RBP6.55□□□□□ -1.36
TMEM116-216ENST00000552800 DNHD1Q96M86 4753 aa6.55□□□□□ -1.36
TMEM116-216ENST00000552800 DNAH1Q9P2D7 4330 aa6.54□□□□□ -1.36
TMEM116-216ENST00000552800 TRBV30A0A0K0K1B3 111 aa6.54□□□□□ -1.36
TMEM116-216ENST00000552800 NDUFC2O95298 119 aa6.54□□□□□ -1.36
TMEM116-216ENST00000552800 CRPP02741 224 aa6.54□□□□□ -1.36
TMEM116-216ENST00000552800 SOSTDC1Q6X4U4 206 aa6.54□□□□□ -1.36
TMEM116-216ENST00000552800 UBE2WQ96B02 151 aa6.54□□□□□ -1.36
TMEM116-216ENST00000552800 LINC01600Q96MT4 127 aa6.54□□□□□ -1.36
TMEM116-216ENST00000552800 ERG28Q9UKR5 140 aa6.54□□□□□ -1.36
TMEM116-216ENST00000552800 PRKDCP78527 4128 aaKnown RBP6.54□□□□□ -1.36
TMEM116-216ENST00000552800 H3BUT2 72 aa6.53□□□□□ -1.36
TMEM116-216ENST00000552800 K7EP34 96 aa6.53□□□□□ -1.36
TMEM116-216ENST00000552800 FABP2P12104 132 aa6.53□□□□□ -1.36
TMEM116-216ENST00000552800 MALP21145 153 aa6.53□□□□□ -1.36
TMEM116-216ENST00000552800 RNF151Q2KHN1 245 aa6.53□□□□□ -1.36
TMEM116-216ENST00000552800 GTF2H5Q6ZYL4 71 aa6.53□□□□□ -1.36
TMEM116-216ENST00000552800 TRBV20-1A0A075B6N2 111 aa6.52□□□□□ -1.37
TMEM116-216ENST00000552800 NUPR2A6NF83 97 aa6.52□□□□□ -1.37
TMEM116-216ENST00000552800 GAGE10A6NGK3 116 aa6.52□□□□□ -1.37
TMEM116-216ENST00000552800 K7ERJ3 54 aa6.52□□□□□ -1.37
TMEM116-216ENST00000552800 TSPAN13O95857 204 aa6.52□□□□□ -1.37
TMEM116-216ENST00000552800 CKS1BP61024 79 aa6.52□□□□□ -1.37
TMEM116-216ENST00000552800 CLPSL2Q6UWE3 100 aa6.52□□□□□ -1.37
TMEM116-216ENST00000552800 IGLV10-54A0A075B6I4 117 aa6.51□□□□□ -1.37
TMEM116-216ENST00000552800 VAMP3Q15836 100 aa6.51□□□□□ -1.37
TMEM116-216ENST00000552800 CFAP161Q6P656 301 aa6.51□□□□□ -1.37
TMEM116-216ENST00000552800 MIR7-3HGQ8N6C7 128 aa6.51□□□□□ -1.37
TMEM116-216ENST00000552800 RAB37Q96AX2 223 aa6.51□□□□□ -1.37
TMEM116-216ENST00000552800 C1orf43Q9BWL3 253 aa6.51□□□□□ -1.37
TMEM116-216ENST00000552800 TOMM7Q9P0U1 55 aa6.51□□□□□ -1.37
TMEM116-216ENST00000552800 TRAV13-2A0A0B4J235 113 aa6.5□□□□□ -1.37
TMEM116-216ENST00000552800 SPAG11BQ08648 103 aa6.5□□□□□ -1.37
TMEM116-216ENST00000552800 LYRM7Q5U5X0 104 aa6.5□□□□□ -1.37
TMEM116-216ENST00000552800 C15orf56Q8N910 161 aa6.5□□□□□ -1.37
TMEM116-216ENST00000552800 RMI2Q96E14 147 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms