RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 SPART-AS1P0CW21 52 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 LINC00158P58513 81 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 NPC2P61916 151 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 MRPL23Q16540 153 aaKnown RBP3.05□□□□□ -1.92
CCDC59-204ENST00000550589 MUC7Q8TAX7 377 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 UBE2WQ96B02 151 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 ITPR3Q14573 2671 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 ZNF469Q96JG9 3925 aaPredicted RBP3.05□□□□□ -1.92
CCDC59-204ENST00000550589 IGKV3OR2-268A0A0C4DH90 116 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 LINC00959A0A1B0GUT2 108 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 A0A1B0GV72 72 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 INAFM1C9JVW0 142 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 H0YGX0 51 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 COX7A2LO14548 114 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 DNAL4O96015 105 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 ACYP1P07311 99 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 CKS1BP61024 79 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 COX17Q14061 63 aa3.05□□□□□ -1.92
CCDC59-204ENST00000550589 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.05□□□□□ -1.92
CCDC59-204ENST00000550589 TRAV8-4A0A0B4J246 113 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 A0A0U1RRA0 63 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 TRACP01848 142 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 MALP21145 153 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 CFAP161Q6P656 301 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 Q8IZM0 81 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 DAND5Q8N907 189 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 WFDC9Q8NEX5 89 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 LINC00476Q8WZB0 136 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 SMR3AQ99954 134 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 CITED1Q99966 193 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 SND1-IT1Q9HBX3 110 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 WNK1Q9H4A3 2382 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 FLNAP21333 2647 aaKnown RBP3.04□□□□□ -1.92
CCDC59-204ENST00000550589 IGLV4-60A0A075B6I1 120 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 NBPF19A0A087WUL8 3843 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 LOC100131303A0A0U1RQF7 123 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 FAM240AA0A1B0GVK7 77 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 RPL28P46779 137 aaKnown RBP3.04□□□□□ -1.92
CCDC59-204ENST00000550589 CD164L2Q6UWJ8 174 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 MIR7-3HGQ8N6C7 128 aa3.04□□□□□ -1.92
CCDC59-204ENST00000550589 NTN5Q8WTR8 489 aaPredicted RBP3.04□□□□□ -1.92
CCDC59-204ENST00000550589 KRTAP29-1A8MX34 341 aaPredicted RBP3.03□□□□□ -1.92
CCDC59-204ENST00000550589 INAFM2P0DMQ5 153 aa3.03□□□□□ -1.92
CCDC59-204ENST00000550589 DEFB135Q30KP9 77 aa3.03□□□□□ -1.92
CCDC59-204ENST00000550589 C5orf38Q86SI9 138 aa3.03□□□□□ -1.92
CCDC59-204ENST00000550589 ANGP03950 147 aaKnown RBP3.02□□□□□ -1.93
CCDC59-204ENST00000550589 XCL1P47992 114 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 KRTAP10-3P60369 221 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 ANK3Q12955 4377 aaKnown RBP3.02□□□□□ -1.93
CCDC59-204ENST00000550589 NACAE9PAV3 2078 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 IGHV4-28A0A0C4DH34 117 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 TEX49A0A1B0GTD5 131 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 A0A1B0GX51 115 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 PFN2P35080 140 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 REG3AQ06141 175 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 GAGE2BQ13066 116 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 GAGE2EQ4V326 116 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 LELP1Q5T871 98 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 CLEC2BQ92478 149 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 GAGE2DQ9UEU5 116 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 CHD6Q8TD26 2715 aa3.02□□□□□ -1.93
CCDC59-204ENST00000550589 H3BNG1 76 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 NDUFC2O95298 119 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 TTC32Q5I0X7 151 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 LINC00269Q8N2A0 174 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 OR13C6PQ8NH95 151 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 TMEM126AQ9H061 195 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 NOTCH3Q9UM47 2321 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 H3BQ85 93 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 BAALC-AS2P0C853 105 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 IGHV4-30-4P0DP06 118 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 DEFB121Q5J5C9 76 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 Q6Q795 121 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 CHCHD10Q8WYQ3 142 aaPredicted RBP3.01□□□□□ -1.93
CCDC59-204ENST00000550589 MTORP42345 2549 aa3.01□□□□□ -1.93
CCDC59-204ENST00000550589 UNC79Q9P2D8 2635 aa3□□□□□ -1.93
CCDC59-204ENST00000550589 AKAP9Q99996 3911 aa3□□□□□ -1.93
CCDC59-204ENST00000550589 ACANP16112 2415 aa3□□□□□ -1.93
CCDC59-204ENST00000550589 A0A096LPF7 62 aa3□□□□□ -1.93
CCDC59-204ENST00000550589 CCL18P55774 89 aa3□□□□□ -1.93
CCDC59-204ENST00000550589 SOSTDC1Q6X4U4 206 aa3□□□□□ -1.93
CCDC59-204ENST00000550589 Q8NAQ8 132 aa3□□□□□ -1.93
CCDC59-204ENST00000550589 IMUPQ9GZP8 106 aa3□□□□□ -1.93
CCDC59-204ENST00000550589 KLK5Q9Y337 293 aaPredicted RBP3□□□□□ -1.93
CCDC59-204ENST00000550589 SETD2Q9BYW2 2564 aaPredicted RBP2.99□□□□□ -1.93
CCDC59-204ENST00000550589 JMJD7-PLA2G4BH0Y9G9 81 aa2.99□□□□□ -1.93
CCDC59-204ENST00000550589 TMEM256-PLSCR3K7ERE1 68 aa2.99□□□□□ -1.93
CCDC59-204ENST00000550589 HTN3P15516 51 aa2.99□□□□□ -1.93
CCDC59-204ENST00000550589 XGP55808 180 aa2.99□□□□□ -1.93
CCDC59-204ENST00000550589 S100A7L2Q5SY68 101 aa2.99□□□□□ -1.93
CCDC59-204ENST00000550589 LINC00337Q8N6G1 96 aa2.99□□□□□ -1.93
CCDC59-204ENST00000550589 C3orf56Q8N813 242 aa2.99□□□□□ -1.93
CCDC59-204ENST00000550589 SMIM11BQ8TCY0 68 aa2.99□□□□□ -1.93
CCDC59-204ENST00000550589 C1orf43Q9BWL3 253 aa2.99□□□□□ -1.93
CCDC59-204ENST00000550589 ORMDL1Q9P0S3 153 aa2.99□□□□□ -1.93
CCDC59-204ENST00000550589 HELZ2Q9BYK8 2649 aaKnown RBP2.99□□□□□ -1.93
CCDC59-204ENST00000550589 PDZD2O15018 2839 aa2.98□□□□□ -1.93
CCDC59-204ENST00000550589 NOTCH2Q04721 2471 aa2.98□□□□□ -1.93
CCDC59-204ENST00000550589 F8WDY8 70 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms