RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 IGKV2-28A0A075B6P5 120 aa8.69□□□□□ -1.02
NR4A1-215ENST00000550557 IGKV2D-28P01615 120 aa8.69□□□□□ -1.02
NR4A1-215ENST00000550557 KLK9Q2XQG4 91 aa8.69□□□□□ -1.02
NR4A1-215ENST00000550557 BPY2O14599 106 aa8.69□□□□□ -1.02
NR4A1-215ENST00000550557 LYPD5Q6UWN5 251 aa8.69□□□□□ -1.02
NR4A1-215ENST00000550557 XIRP2A4UGR9 3374 aa8.68□□□□□ -1.02
NR4A1-215ENST00000550557 USP17L23D6RBM5 183 aa8.68□□□□□ -1.02
NR4A1-215ENST00000550557 UPK3BQ9BT76 320 aa8.68□□□□□ -1.02
NR4A1-215ENST00000550557 ZNF706Q9Y5V0 76 aaPredicted RBP8.68□□□□□ -1.02
NR4A1-215ENST00000550557 C5orf47Q569G3 176 aa8.68□□□□□ -1.02
NR4A1-215ENST00000550557 WFDC10BQ8IUB3 73 aa8.68□□□□□ -1.02
NR4A1-215ENST00000550557 UBE2D4Q9Y2X8 147 aa8.68□□□□□ -1.02
NR4A1-215ENST00000550557 CHKB-CPT1BH3BT56 60 aa8.68□□□□□ -1.02
NR4A1-215ENST00000550557 POM121L12Q8N7R1 296 aa8.68□□□□□ -1.02
NR4A1-215ENST00000550557 LAMA1P25391 3075 aa8.67□□□□□ -1.02
NR4A1-215ENST00000550557 TEP1Q99973 2627 aaKnown RBP8.67□□□□□ -1.02
NR4A1-215ENST00000550557 XGP55808 180 aa8.67□□□□□ -1.02
NR4A1-215ENST00000550557 CELA1Q9UNI1 258 aa8.67□□□□□ -1.02
NR4A1-215ENST00000550557 MRPS36P82909 103 aaKnown RBP8.67□□□□□ -1.02
NR4A1-215ENST00000550557 CDC42SE2Q9NRR3 84 aa8.67□□□□□ -1.02
NR4A1-215ENST00000550557 CYSRT1A8MQ03 144 aa8.66□□□□□ -1.02
NR4A1-215ENST00000550557 PPDPFQ9H3Y8 114 aa8.66□□□□□ -1.02
NR4A1-215ENST00000550557 DNAH14Q0VDD8 3507 aa8.66□□□□□ -1.02
NR4A1-215ENST00000550557 C3orf22Q8N5N4 141 aa8.65□□□□□ -1.02
NR4A1-215ENST00000550557 PLAC8L1A1L4L8 177 aa8.65□□□□□ -1.02
NR4A1-215ENST00000550557 ZNF292O60281 2723 aa8.65□□□□□ -1.02
NR4A1-215ENST00000550557 H0Y9J4 135 aa8.65□□□□□ -1.02
NR4A1-215ENST00000550557 TSPEAR-AS2P59090 65 aa8.65□□□□□ -1.03
NR4A1-215ENST00000550557 TRAV23DV6A0A075B6W5 121 aa8.64□□□□□ -1.03
NR4A1-215ENST00000550557 A0A096LNT2 108 aa8.64□□□□□ -1.03
NR4A1-215ENST00000550557 LST1O00453 97 aa8.64□□□□□ -1.03
NR4A1-215ENST00000550557 A8MZ25 164 aa8.64□□□□□ -1.03
NR4A1-215ENST00000550557 M0R378 163 aa8.64□□□□□ -1.03
NR4A1-215ENST00000550557 RPL37AP8A6NKH3 93 aa8.63□□□□□ -1.03
NR4A1-215ENST00000550557 ATP5EP56381 51 aaPredicted RBP8.63□□□□□ -1.03
NR4A1-215ENST00000550557 C20orf197Q8N268 126 aa8.63□□□□□ -1.03
NR4A1-215ENST00000550557 NDUFC1O43677 76 aa8.63□□□□□ -1.03
NR4A1-215ENST00000550557 FAM236DA0A1B0GTK5 79 aa8.63□□□□□ -1.03
NR4A1-215ENST00000550557 FAM236CP0DP71 79 aa8.63□□□□□ -1.03
NR4A1-215ENST00000550557 C6orf223Q8N319 242 aa8.63□□□□□ -1.03
NR4A1-215ENST00000550557 BAHCC1Q9P281 2608 aa8.62□□□□□ -1.03
NR4A1-215ENST00000550557 RPL28P46779 137 aaKnown RBP8.62□□□□□ -1.03
NR4A1-215ENST00000550557 M0QXV9 152 aa8.62□□□□□ -1.03
NR4A1-215ENST00000550557 EGFEM1PQ0D2K5 195 aa8.62□□□□□ -1.03
NR4A1-215ENST00000550557 Q8IZM0 81 aa8.61□□□□□ -1.03
NR4A1-215ENST00000550557 AGRNO00468 2067 aa8.61□□□□□ -1.03
NR4A1-215ENST00000550557 IGLV4-60A0A075B6I1 120 aa8.61□□□□□ -1.03
NR4A1-215ENST00000550557 UNQ6190/PRO20217Q6UXQ8 127 aa8.61□□□□□ -1.03
NR4A1-215ENST00000550557 FAM19A4Q96LR4 140 aa8.61□□□□□ -1.03
NR4A1-215ENST00000550557 SDIM1Q6ZPB5 146 aa8.61□□□□□ -1.03
NR4A1-215ENST00000550557 CFAP54Q96N23 3096 aa8.61□□□□□ -1.03
NR4A1-215ENST00000550557 COX6A2Q02221 97 aa8.6□□□□□ -1.03
NR4A1-215ENST00000550557 SERP2Q8N6R1 65 aa8.6□□□□□ -1.03
NR4A1-215ENST00000550557 Q6Q795 121 aa8.6□□□□□ -1.03
NR4A1-215ENST00000550557 C6orf99Q4VX62 202 aa8.6□□□□□ -1.03
NR4A1-215ENST00000550557 KIF25-AS1Q9Y6Z4 181 aa8.6□□□□□ -1.03
NR4A1-215ENST00000550557 FAM240AA0A1B0GVK7 77 aa8.59□□□□□ -1.03
NR4A1-215ENST00000550557 VCANP13611 3396 aa8.59□□□□□ -1.03
NR4A1-215ENST00000550557 VPS13AQ96RL7 3174 aa8.58□□□□□ -1.04
NR4A1-215ENST00000550557 K7EIL1 84 aa8.58□□□□□ -1.04
NR4A1-215ENST00000550557 REV3LO60673 3130 aa8.58□□□□□ -1.04
NR4A1-215ENST00000550557 ESRGQ1W209 222 aa8.57□□□□□ -1.04
NR4A1-215ENST00000550557 SPINK6Q6UWN8 80 aa8.57□□□□□ -1.04
NR4A1-215ENST00000550557 WDFY4Q6ZS81 3184 aa8.57□□□□□ -1.04
NR4A1-215ENST00000550557 LINC00694P0DN24 101 aa8.57□□□□□ -1.04
NR4A1-215ENST00000550557 COX17Q14061 63 aa8.57□□□□□ -1.04
NR4A1-215ENST00000550557 LINC00242Q5T6M2 205 aa8.57□□□□□ -1.04
NR4A1-215ENST00000550557 DHRS4-AS1Q9P1J3 65 aa8.57□□□□□ -1.04
NR4A1-215ENST00000550557 X6R8D5 127 aa8.57□□□□□ -1.04
NR4A1-215ENST00000550557 MGAQ8IWI9 3026 aa8.57□□□□□ -1.04
NR4A1-215ENST00000550557 ENHOQ6UWT2 76 aa8.57□□□□□ -1.04
NR4A1-215ENST00000550557 A0A1B0GUV1 79 aa8.56□□□□□ -1.04
NR4A1-215ENST00000550557 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
NR4A1-215ENST00000550557 LINC01556Q5JQF7 62 aa8.56□□□□□ -1.04
NR4A1-215ENST00000550557 Q6ZSN1 163 aa8.56□□□□□ -1.04
NR4A1-215ENST00000550557 V9GYY9 64 aa8.56□□□□□ -1.04
NR4A1-215ENST00000550557 IGLV9-49A0A0B4J1Y8 123 aa8.56□□□□□ -1.04
NR4A1-215ENST00000550557 NDUFC2-KCTD14E9PQ53 114 aa8.56□□□□□ -1.04
NR4A1-215ENST00000550557 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
NR4A1-215ENST00000550557 C3orf84H3BNL1 204 aa8.55□□□□□ -1.04
NR4A1-215ENST00000550557 COX7CP15954 63 aa8.55□□□□□ -1.04
NR4A1-215ENST00000550557 LINC00315P59091 139 aa8.55□□□□□ -1.04
NR4A1-215ENST00000550557 BRK1Q8WUW1 75 aa8.55□□□□□ -1.04
NR4A1-215ENST00000550557 C11orf72Q8NBR9 251 aa8.55□□□□□ -1.04
NR4A1-215ENST00000550557 AMELXQ99217 191 aa8.55□□□□□ -1.04
NR4A1-215ENST00000550557 C16orf90A8MZG2 172 aa8.54□□□□□ -1.04
NR4A1-215ENST00000550557 SLPIP03973 132 aa8.54□□□□□ -1.04
NR4A1-215ENST00000550557 Q6JHZ5 121 aa8.54□□□□□ -1.04
NR4A1-215ENST00000550557 PRO0461Q9UI25 63 aa8.54□□□□□ -1.04
NR4A1-215ENST00000550557 HRCT1Q6UXD1 115 aa8.54□□□□□ -1.04
NR4A1-215ENST00000550557 CDIP1Q9H305 208 aa8.54□□□□□ -1.04
NR4A1-215ENST00000550557 STAB1Q9NY15 2570 aa8.53□□□□□ -1.04
NR4A1-215ENST00000550557 CCDC179H3BU77 68 aa8.53□□□□□ -1.04
NR4A1-215ENST00000550557 SEC61GP60059 68 aa8.53□□□□□ -1.04
NR4A1-215ENST00000550557 MUC4Q99102 2169 aa8.53□□□□□ -1.04
NR4A1-215ENST00000550557 NBDYA0A0U1RRE5 68 aa8.53□□□□□ -1.04
NR4A1-215ENST00000550557 H3BNG1 76 aa8.53□□□□□ -1.04
NR4A1-215ENST00000550557 CCKP06307 115 aa8.53□□□□□ -1.04
NR4A1-215ENST00000550557 ADAMTSL4-AS1Q5T5F5 129 aa8.53□□□□□ -1.04
NR4A1-215ENST00000550557 FAM229AH3BQW9 127 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms