RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 LINC01546A6NGU7 62 aa12.22□□□□□ -0.45
GCN1-207ENST00000550471 M0QXV9 152 aa12.22□□□□□ -0.45
GCN1-207ENST00000550471 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
GCN1-207ENST00000550471 F8VRH5 84 aa12.21□□□□□ -0.45
GCN1-207ENST00000550471 UBE2BP63146 152 aa12.21□□□□□ -0.45
GCN1-207ENST00000550471 RHEBQ15382 184 aa12.21□□□□□ -0.45
GCN1-207ENST00000550471 TINCRA0A1B0GVN0 87 aa12.2□□□□□ -0.46
GCN1-207ENST00000550471 CDKN2A-AS1Q9UH64 79 aa12.2□□□□□ -0.46
GCN1-207ENST00000550471 FAM168BA1KXE4 195 aa12.19□□□□□ -0.46
GCN1-207ENST00000550471 IFITM2Q01629 132 aa12.19□□□□□ -0.46
GCN1-207ENST00000550471 LBHQ53QV2 105 aaPredicted RBP12.19□□□□□ -0.46
GCN1-207ENST00000550471 PDZD11Q5EBL8 140 aa12.19□□□□□ -0.46
GCN1-207ENST00000550471 ZC2HC1BQ5TFG8 222 aa12.19□□□□□ -0.46
GCN1-207ENST00000550471 SMCO4Q9NRQ5 59 aa12.19□□□□□ -0.46
GCN1-207ENST00000550471 FA2HQ7L5A8 372 aa12.18□□□□□ -0.46
GCN1-207ENST00000550471 LINC00469Q8N7U9 141 aa12.18□□□□□ -0.46
GCN1-207ENST00000550471 TNXBP22105 4242 aa12.17□□□□□ -0.46
GCN1-207ENST00000550471 H0Y9J4 135 aa12.17□□□□□ -0.46
GCN1-207ENST00000550471 C9orf129Q5T035 196 aaKnown RBP12.17□□□□□ -0.46
GCN1-207ENST00000550471 C10orf91Q5T1B1 145 aa12.17□□□□□ -0.46
GCN1-207ENST00000550471 COMMD7Q86VX2 200 aa12.17□□□□□ -0.46
GCN1-207ENST00000550471 MRPL18Q9H0U6 180 aaKnown RBP12.17□□□□□ -0.46
GCN1-207ENST00000550471 IGLV5-45A0A087WSX0 123 aa12.16□□□□□ -0.46
GCN1-207ENST00000550471 CARHSP1Q9Y2V2 147 aaKnown RBP12.16□□□□□ -0.46
GCN1-207ENST00000550471 NUPR1O60356 82 aa12.15□□□□□ -0.46
GCN1-207ENST00000550471 FABP9Q0Z7S8 132 aa12.15□□□□□ -0.46
GCN1-207ENST00000550471 PMVKQ15126 192 aa12.15□□□□□ -0.46
GCN1-207ENST00000550471 TP73-AS1Q9UF72 201 aa12.15□□□□□ -0.46
GCN1-207ENST00000550471 H3BRM9 83 aa12.14□□□□□ -0.47
GCN1-207ENST00000550471 CST9LQ9H4G1 147 aa12.14□□□□□ -0.47
GCN1-207ENST00000550471 IGLV1-50A0A075B6I6 118 aa12.13□□□□□ -0.47
GCN1-207ENST00000550471 SMIM1B2RUZ4 78 aa12.13□□□□□ -0.47
GCN1-207ENST00000550471 KRTAP7-1Q8IUC3 87 aa12.13□□□□□ -0.47
GCN1-207ENST00000550471 COX7B2Q8TF08 81 aa12.13□□□□□ -0.47
GCN1-207ENST00000550471 RPS10P5Q9NQ39 176 aa12.13□□□□□ -0.47
GCN1-207ENST00000550471 RPL13AP40429 203 aaKnown RBP12.1□□□□□ -0.47
GCN1-207ENST00000550471 C22orf24Q9Y442 160 aa12.1□□□□□ -0.47
GCN1-207ENST00000550471 ZNF861PO60384 105 aa12.08□□□□□ -0.48
GCN1-207ENST00000550471 RAB5BP61020 215 aa12.08□□□□□ -0.48
GCN1-207ENST00000550471 NDUFA5Q16718 116 aa12.08□□□□□ -0.48
GCN1-207ENST00000550471 KRTAP11-1Q8IUC1 163 aa12.08□□□□□ -0.48
GCN1-207ENST00000550471 XAGE1AQ9HD64 81 aa12.08□□□□□ -0.48
GCN1-207ENST00000550471 ATP5LO75964 103 aa12.07□□□□□ -0.48
GCN1-207ENST00000550471 MRPL55Q7Z7F7 128 aaKnown RBP12.07□□□□□ -0.48
GCN1-207ENST00000550471 TRAPPC1Q9Y5R8 145 aa12.07□□□□□ -0.48
GCN1-207ENST00000550471 LINC00614P0C842 121 aa12.06□□□□□ -0.48
GCN1-207ENST00000550471 SFTA2Q6UW10 78 aa12.06□□□□□ -0.48
GCN1-207ENST00000550471 UBR4Q5T4S7 5183 aa12.06□□□□□ -0.48
GCN1-207ENST00000550471 IGLC3P0DOY3 106 aa12.05□□□□□ -0.48
GCN1-207ENST00000550471 SNAPINO95295 136 aa12.04□□□□□ -0.48
GCN1-207ENST00000550471 HBDP02042 147 aa12.04□□□□□ -0.48
GCN1-207ENST00000550471 RPL28P46779 137 aaKnown RBP12.04□□□□□ -0.48
GCN1-207ENST00000550471 SVBPQ8N300 66 aa12.04□□□□□ -0.48
GCN1-207ENST00000550471 SPINK8P0C7L1 97 aa12.03□□□□□ -0.48
GCN1-207ENST00000550471 PRR26Q8N8Z3 221 aa12.03□□□□□ -0.48
GCN1-207ENST00000550471 IGLV5-37A0A075B6J1 123 aa12.02□□□□□ -0.49
GCN1-207ENST00000550471 C18orf32Q8TCD1 76 aa12.02□□□□□ -0.49
GCN1-207ENST00000550471 KRTAP1-4P0C5Y4 121 aa12.01□□□□□ -0.49
GCN1-207ENST00000550471 COX17Q14061 63 aa12.01□□□□□ -0.49
GCN1-207ENST00000550471 IGLV5-39A0A0G2JS06 123 aa12□□□□□ -0.49
GCN1-207ENST00000550471 BCE1O60756 84 aa12□□□□□ -0.49
GCN1-207ENST00000550471 NDUFA6P56556 154 aa12□□□□□ -0.49
GCN1-207ENST00000550471 NKAPP1Q8N9T2 125 aa12□□□□□ -0.49
GCN1-207ENST00000550471 APOC3P02656 99 aa11.99□□□□□ -0.49
GCN1-207ENST00000550471 A0A096LNJ9 63 aa11.97□□□□□ -0.49
GCN1-207ENST00000550471 LINC00167Q96N53 147 aa11.97□□□□□ -0.49
GCN1-207ENST00000550471 ZNF22P17026 224 aaPredicted RBP11.96□□□□□ -0.49
GCN1-207ENST00000550471 RPL24P83731 157 aaKnown RBP11.95□□□□□ -0.5
GCN1-207ENST00000550471 BAGE3Q86Y29 109 aa11.94□□□□□ -0.5
GCN1-207ENST00000550471 CHCHD1Q96BP2 118 aaKnown RBP11.94□□□□□ -0.5
GCN1-207ENST00000550471 URB1-AS1Q96HZ7 61 aa11.94□□□□□ -0.5
GCN1-207ENST00000550471 ERG28Q9UKR5 140 aa11.94□□□□□ -0.5
GCN1-207ENST00000550471 TMEM170BQ5T4T1 132 aa11.92□□□□□ -0.5
GCN1-207ENST00000550471 RPL37AP8A6NKH3 93 aa11.91□□□□□ -0.5
GCN1-207ENST00000550471 PFN2P35080 140 aa11.91□□□□□ -0.5
GCN1-207ENST00000550471 LRP2P98164 4655 aa11.9□□□□□ -0.5
GCN1-207ENST00000550471 TRAV12-1A0A0B4J245 112 aa11.9□□□□□ -0.5
GCN1-207ENST00000550471 CRYGAP11844 174 aa11.9□□□□□ -0.5
GCN1-207ENST00000550471 UBE2AP49459 152 aa11.9□□□□□ -0.5
GCN1-207ENST00000550471 CHTOPQ9Y3Y2 248 aaKnown RBP11.9□□□□□ -0.5
GCN1-207ENST00000550471 GAGE10A6NGK3 116 aa11.88□□□□□ -0.51
GCN1-207ENST00000550471 C11orf86A6NJI1 115 aa11.88□□□□□ -0.51
GCN1-207ENST00000550471 PMCHL1Q16048 86 aa11.88□□□□□ -0.51
GCN1-207ENST00000550471 SND1-IT1Q9HBX3 110 aa11.88□□□□□ -0.51
GCN1-207ENST00000550471 IFI27L1Q96BM0 104 aa11.86□□□□□ -0.51
GCN1-207ENST00000550471 LINC00587B1AMM8 73 aa11.85□□□□□ -0.51
GCN1-207ENST00000550471 VPREB1P12018 145 aa11.85□□□□□ -0.51
GCN1-207ENST00000550471 FAM229BQ4G0N7 80 aa11.85□□□□□ -0.51
GCN1-207ENST00000550471 ZNF625Q96I27 306 aaPredicted RBP11.85□□□□□ -0.51
GCN1-207ENST00000550471 KRTAP13-1Q8IUC0 172 aa11.84□□□□□ -0.51
GCN1-207ENST00000550471 YPEL4Q96NS1 127 aa11.84□□□□□ -0.51
GCN1-207ENST00000550471 TYMSOSQ8TAI1 123 aa11.83□□□□□ -0.52
GCN1-207ENST00000550471 IGKV2-28A0A075B6P5 120 aa11.82□□□□□ -0.52
GCN1-207ENST00000550471 TMEM223A0PJW6 202 aa11.82□□□□□ -0.52
GCN1-207ENST00000550471 HSBP1O75506 76 aa11.82□□□□□ -0.52
GCN1-207ENST00000550471 IGKV2D-28P01615 120 aa11.82□□□□□ -0.52
GCN1-207ENST00000550471 CTAG1AP78358 180 aa11.82□□□□□ -0.52
GCN1-207ENST00000550471 ATP6V1G1O75348 118 aa11.81□□□□□ -0.52
GCN1-207ENST00000550471 LINC00158P58513 81 aa11.81□□□□□ -0.52
GCN1-207ENST00000550471 HERV-K104P63124 156 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms