RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 FAT4Q6V0I7 4981 aa8.38□□□□□ -1.07
CNOT2-220ENST00000549750 GNB1LQ9BYB4 327 aa8.38□□□□□ -1.07
CNOT2-220ENST00000549750 LPAP08519 4548 aa8.37□□□□□ -1.07
CNOT2-220ENST00000549750 IGLV4-3A0A075B6K6 122 aa8.37□□□□□ -1.07
CNOT2-220ENST00000549750 KIAA0087Q14695 138 aa8.37□□□□□ -1.07
CNOT2-220ENST00000549750 LINC00242Q5T6M2 205 aa8.37□□□□□ -1.07
CNOT2-220ENST00000549750 C10orf25Q5T742 122 aa8.37□□□□□ -1.07
CNOT2-220ENST00000549750 LINC01561Q8N1V8 128 aa8.37□□□□□ -1.07
CNOT2-220ENST00000549750 C6orf48Q9UBA6 75 aa8.37□□□□□ -1.07
CNOT2-220ENST00000549750 PHF5AQ7RTV0 110 aaKnown RBP8.36□□□□□ -1.07
CNOT2-220ENST00000549750 HIST3H2BBQ8N257 126 aa8.36□□□□□ -1.07
CNOT2-220ENST00000549750 TMEM141Q96I45 108 aa8.36□□□□□ -1.07
CNOT2-220ENST00000549750 TRBV30A0A0K0K1B3 111 aa8.35□□□□□ -1.07
CNOT2-220ENST00000549750 K7EMI3 77 aa8.35□□□□□ -1.07
CNOT2-220ENST00000549750 NPSP0C0P6 89 aa8.35□□□□□ -1.07
CNOT2-220ENST00000549750 C1orf137Q5JT78 98 aa8.35□□□□□ -1.07
CNOT2-220ENST00000549750 UNQ6190/PRO20217Q6UXQ8 127 aa8.35□□□□□ -1.07
CNOT2-220ENST00000549750 MAP1LC3AQ9H492 121 aa8.35□□□□□ -1.07
CNOT2-220ENST00000549750 MUC2Q02817 5179 aa8.34□□□□□ -1.07
CNOT2-220ENST00000549750 UBE2D1P51668 147 aa8.34□□□□□ -1.07
CNOT2-220ENST00000549750 TEX43Q6ZNM6 134 aa8.34□□□□□ -1.07
CNOT2-220ENST00000549750 Q8N8P6 123 aa8.34□□□□□ -1.07
CNOT2-220ENST00000549750 IGLV7-43P04211 117 aa8.33□□□□□ -1.08
CNOT2-220ENST00000549750 PACRGQ96M98 296 aaPredicted RBP8.33□□□□□ -1.08
CNOT2-220ENST00000549750 AMELXQ99217 191 aa8.33□□□□□ -1.08
CNOT2-220ENST00000549750 MRPL18Q9H0U6 180 aaKnown RBP8.33□□□□□ -1.08
CNOT2-220ENST00000549750 CYSLTR1Q9Y271 337 aa8.33□□□□□ -1.08
CNOT2-220ENST00000549750 FAM168BA1KXE4 195 aa8.32□□□□□ -1.08
CNOT2-220ENST00000549750 C2orf66Q6UXQ4 117 aa8.32□□□□□ -1.08
CNOT2-220ENST00000549750 LINC00173Q6ZV60 143 aa8.32□□□□□ -1.08
CNOT2-220ENST00000549750 FAM19A3Q7Z5A8 133 aa8.32□□□□□ -1.08
CNOT2-220ENST00000549750 KRTAP7-1Q8IUC3 87 aa8.32□□□□□ -1.08
CNOT2-220ENST00000549750 DIRC1Q969H9 104 aa8.32□□□□□ -1.08
CNOT2-220ENST00000549750 C2orf88Q9BSF0 95 aa8.32□□□□□ -1.08
CNOT2-220ENST00000549750 LOC389332A0A1B0GUA5 103 aa8.31□□□□□ -1.08
CNOT2-220ENST00000549750 NDUFC2-KCTD14E9PQ53 114 aa8.31□□□□□ -1.08
CNOT2-220ENST00000549750 FABP4P15090 132 aa8.31□□□□□ -1.08
CNOT2-220ENST00000549750 ORMDL2Q53FV1 153 aa8.31□□□□□ -1.08
CNOT2-220ENST00000549750 Q6ZN92 141 aa8.31□□□□□ -1.08
CNOT2-220ENST00000549750 KRTAP11-1Q8IUC1 163 aa8.31□□□□□ -1.08
CNOT2-220ENST00000549750 A0A0U1RQV1 116 aa8.3□□□□□ -1.08
CNOT2-220ENST00000549750 IGIPA6NJ69 53 aa8.3□□□□□ -1.08
CNOT2-220ENST00000549750 GAGE2EQ4V326 116 aa8.3□□□□□ -1.08
CNOT2-220ENST00000549750 HIST1H2BLQ99880 126 aa8.3□□□□□ -1.08
CNOT2-220ENST00000549750 GAGE2DQ9UEU5 116 aa8.3□□□□□ -1.08
CNOT2-220ENST00000549750 H0Y9J4 135 aa8.29□□□□□ -1.08
CNOT2-220ENST00000549750 C2orf82Q6UX34 121 aa8.29□□□□□ -1.08
CNOT2-220ENST00000549750 FAM19A5Q7Z5A7 132 aaPredicted RBP8.29□□□□□ -1.08
CNOT2-220ENST00000549750 VCX2Q9H322 139 aa8.29□□□□□ -1.08
CNOT2-220ENST00000549750 NXT2Q9NPJ8 142 aaKnown RBP8.29□□□□□ -1.08
CNOT2-220ENST00000549750 M0QXV9 152 aa8.28□□□□□ -1.08
CNOT2-220ENST00000549750 JOSD1Q15040 202 aaPredicted RBP8.28□□□□□ -1.08
CNOT2-220ENST00000549750 C9orf129Q5T035 196 aaKnown RBP8.28□□□□□ -1.08
CNOT2-220ENST00000549750 BAGE3Q86Y29 109 aa8.28□□□□□ -1.08
CNOT2-220ENST00000549750 PCP4L1A6NKN8 68 aa8.27□□□□□ -1.09
CNOT2-220ENST00000549750 G0S2P27469 103 aa8.27□□□□□ -1.09
CNOT2-220ENST00000549750 SEC11AP67812 179 aa8.27□□□□□ -1.09
CNOT2-220ENST00000549750 PAPPA-AS1Q5QFB9 102 aa8.27□□□□□ -1.09
CNOT2-220ENST00000549750 Q8IZM0 81 aa8.27□□□□□ -1.09
CNOT2-220ENST00000549750 TIMM17AQ99595 171 aa8.27□□□□□ -1.09
CNOT2-220ENST00000549750 HERVK_113P63121 156 aa8.26□□□□□ -1.09
CNOT2-220ENST00000549750 PDZD11Q5EBL8 140 aa8.26□□□□□ -1.09
CNOT2-220ENST00000549750 ZC2HC1BQ5TFG8 222 aa8.26□□□□□ -1.09
CNOT2-220ENST00000549750 IGLV1-50A0A075B6I6 118 aa8.25□□□□□ -1.09
CNOT2-220ENST00000549750 PRSS2P07478 247 aa8.25□□□□□ -1.09
CNOT2-220ENST00000549750 KRTAP1-4P0C5Y4 121 aa8.25□□□□□ -1.09
CNOT2-220ENST00000549750 PYY3Q5JQD4 70 aa8.25□□□□□ -1.09
CNOT2-220ENST00000549750 PRR26Q8N8Z3 221 aa8.25□□□□□ -1.09
CNOT2-220ENST00000549750 TSTD3H0UI37 97 aa8.24□□□□□ -1.09
CNOT2-220ENST00000549750 CKS1BP61024 79 aa8.24□□□□□ -1.09
CNOT2-220ENST00000549750 UBE2BP63146 152 aa8.24□□□□□ -1.09
CNOT2-220ENST00000549750 TOMM6Q96B49 74 aa8.24□□□□□ -1.09
CNOT2-220ENST00000549750 C6orf226Q5I0X4 101 aa8.23□□□□□ -1.09
CNOT2-220ENST00000549750 ALKBH7Q9BT30 221 aaPredicted RBP8.23□□□□□ -1.09
CNOT2-220ENST00000549750 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
CNOT2-220ENST00000549750 LINC01549A6NIU2 74 aa8.22□□□□□ -1.09
CNOT2-220ENST00000549750 F8VRH5 84 aa8.22□□□□□ -1.09
CNOT2-220ENST00000549750 CXCL5P42830 114 aa8.22□□□□□ -1.09
CNOT2-220ENST00000549750 ERASQ7Z444 233 aa8.22□□□□□ -1.09
CNOT2-220ENST00000549750 TOMM7Q9P0U1 55 aa8.22□□□□□ -1.09
CNOT2-220ENST00000549750 LINC01546A6NGU7 62 aa8.21□□□□□ -1.1
CNOT2-220ENST00000549750 NUPR1O60356 82 aa8.21□□□□□ -1.1
CNOT2-220ENST00000549750 GEMIN7Q9H840 131 aaKnown RBP8.21□□□□□ -1.1
CNOT2-220ENST00000549750 TP73-AS1Q9UF72 201 aa8.21□□□□□ -1.1
CNOT2-220ENST00000549750 IGLV5-45A0A087WSX0 123 aa8.2□□□□□ -1.1
CNOT2-220ENST00000549750 SERF1AO75920 110 aa8.2□□□□□ -1.1
CNOT2-220ENST00000549750 SCGB1D1O95968 90 aa8.2□□□□□ -1.1
CNOT2-220ENST00000549750 RPL13AP40429 203 aaKnown RBP8.2□□□□□ -1.1
CNOT2-220ENST00000549750 CHCHD1Q96BP2 118 aaKnown RBP8.2□□□□□ -1.1
CNOT2-220ENST00000549750 C22orf24Q9Y442 160 aa8.2□□□□□ -1.1
CNOT2-220ENST00000549750 SMIM1B2RUZ4 78 aa8.19□□□□□ -1.1
CNOT2-220ENST00000549750 ZNF861PO60384 105 aa8.19□□□□□ -1.1
CNOT2-220ENST00000549750 LBHQ53QV2 105 aaPredicted RBP8.19□□□□□ -1.1
CNOT2-220ENST00000549750 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
CNOT2-220ENST00000549750 TINCRA0A1B0GVN0 87 aa8.18□□□□□ -1.1
CNOT2-220ENST00000549750 HSBP1O75506 76 aa8.18□□□□□ -1.1
CNOT2-220ENST00000549750 KIAA1644Q3SXP7 199 aa8.18□□□□□ -1.1
CNOT2-220ENST00000549750 C18orf32Q8TCD1 76 aa8.18□□□□□ -1.1
CNOT2-220ENST00000549750 SCGB3A1Q96QR1 104 aa8.18□□□□□ -1.1
CNOT2-220ENST00000549750 XAGE1AQ9HD64 81 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms