RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 CCL18P55774 89 aa10.05□□□□□ -0.8
CACNB3-209ENST00000548860 HIGD2BQ4VC39 106 aa10.05□□□□□ -0.8
CACNB3-209ENST00000548860 BRI3O95415 125 aa10.04□□□□□ -0.8
CACNB3-209ENST00000548860 WFDC9Q8NEX5 89 aa10.04□□□□□ -0.8
CACNB3-209ENST00000548860 LITAFQ99732 161 aa10.04□□□□□ -0.8
CACNB3-209ENST00000548860 A0A087WYN8 130 aa10.03□□□□□ -0.8
CACNB3-209ENST00000548860 TRAV25A0A0B4J276 109 aa10.03□□□□□ -0.8
CACNB3-209ENST00000548860 CMC4P56277 68 aaPredicted RBP10.03□□□□□ -0.8
CACNB3-209ENST00000548860 RPL18AQ02543 176 aaKnown RBP10.03□□□□□ -0.8
CACNB3-209ENST00000548860 FAM218AQ96MZ4 157 aa10.03□□□□□ -0.8
CACNB3-209ENST00000548860 MRAPQ8TCY5 172 aa10.02□□□□□ -0.8
CACNB3-209ENST00000548860 LINC00337Q8N6G1 96 aa10.02□□□□□ -0.81
CACNB3-209ENST00000548860 INAFM2P0DMQ5 153 aa10.02□□□□□ -0.81
CACNB3-209ENST00000548860 PRO0255Q9UI72 69 aa10.01□□□□□ -0.81
CACNB3-209ENST00000548860 LINC00959A0A1B0GUT2 108 aa10.01□□□□□ -0.81
CACNB3-209ENST00000548860 COL6A5A8TX70 2615 aa10.01□□□□□ -0.81
CACNB3-209ENST00000548860 BEAN1Q3B7T3 259 aa10□□□□□ -0.81
CACNB3-209ENST00000548860 CHCHD10Q8WYQ3 142 aaPredicted RBP10□□□□□ -0.81
CACNB3-209ENST00000548860 DEFB105AQ8NG35 78 aa10□□□□□ -0.81
CACNB3-209ENST00000548860 A0A087WVE0 104 aa10□□□□□ -0.81
CACNB3-209ENST00000548860 FHL2Q14192 279 aa9.99□□□□□ -0.81
CACNB3-209ENST00000548860 ZNF469Q96JG9 3925 aaPredicted RBP9.99□□□□□ -0.81
CACNB3-209ENST00000548860 PRB2P02812 416 aaPredicted RBP9.99□□□□□ -0.81
CACNB3-209ENST00000548860 DEFB121Q5J5C9 76 aa9.99□□□□□ -0.81
CACNB3-209ENST00000548860 NBPF19A0A087WUL8 3843 aa9.99□□□□□ -0.81
CACNB3-209ENST00000548860 A0A096LNT2 108 aa9.99□□□□□ -0.81
CACNB3-209ENST00000548860 C6orf223Q8N319 242 aa9.99□□□□□ -0.81
CACNB3-209ENST00000548860 REG3AQ06141 175 aa9.98□□□□□ -0.81
CACNB3-209ENST00000548860 TRBV6-4A0A1B0GX49 114 aa9.98□□□□□ -0.81
CACNB3-209ENST00000548860 ZNF561-AS1K7EIQ3 104 aa9.98□□□□□ -0.81
CACNB3-209ENST00000548860 SPAG11BQ08648 103 aa9.98□□□□□ -0.81
CACNB3-209ENST00000548860 C6orf99Q4VX62 202 aa9.98□□□□□ -0.81
CACNB3-209ENST00000548860 DPH3Q96FX2 82 aa9.98□□□□□ -0.81
CACNB3-209ENST00000548860 ORMDL1Q9P0S3 153 aa9.98□□□□□ -0.81
CACNB3-209ENST00000548860 FAM104AQ969W3 186 aa9.97□□□□□ -0.81
CACNB3-209ENST00000548860 CR1P17927 2039 aa9.97□□□□□ -0.81
CACNB3-209ENST00000548860 SCXQ7RTU7 201 aa9.97□□□□□ -0.81
CACNB3-209ENST00000548860 A0A1B0GX51 115 aa9.96□□□□□ -0.81
CACNB3-209ENST00000548860 RETNQ9HD89 108 aa9.96□□□□□ -0.81
CACNB3-209ENST00000548860 LY6G6DO95868 133 aa9.96□□□□□ -0.82
CACNB3-209ENST00000548860 IGLV1-51P01701 117 aa9.96□□□□□ -0.82
CACNB3-209ENST00000548860 IGKV2D-24A0A075B6R9 120 aa9.96□□□□□ -0.82
CACNB3-209ENST00000548860 UNQ6190/PRO20217Q6UXQ8 127 aa9.96□□□□□ -0.82
CACNB3-209ENST00000548860 TRAV23DV6A0A075B6W5 121 aa9.95□□□□□ -0.82
CACNB3-209ENST00000548860 IGHV4-28A0A0C4DH34 117 aa9.95□□□□□ -0.82
CACNB3-209ENST00000548860 OXLD1Q5BKU9 147 aa9.95□□□□□ -0.82
CACNB3-209ENST00000548860 LOC107984640A0A0U1RRK4 108 aa9.94□□□□□ -0.82
CACNB3-209ENST00000548860 KLK5Q9Y337 293 aaPredicted RBP9.94□□□□□ -0.82
CACNB3-209ENST00000548860 BAHCC1Q9P281 2608 aa9.94□□□□□ -0.82
CACNB3-209ENST00000548860 C5orf47Q569G3 176 aa9.93□□□□□ -0.82
CACNB3-209ENST00000548860 CXCL5P42830 114 aa9.93□□□□□ -0.82
CACNB3-209ENST00000548860 SPATA3Q8NHX4 192 aa9.93□□□□□ -0.82
CACNB3-209ENST00000548860 TIMM17BO60830 172 aa9.92□□□□□ -0.82
CACNB3-209ENST00000548860 APOC4P55056 127 aa9.92□□□□□ -0.82
CACNB3-209ENST00000548860 LRRC75A-AS1Q8N1F1 130 aa9.92□□□□□ -0.82
CACNB3-209ENST00000548860 IGLV5-39A0A0G2JS06 123 aa9.91□□□□□ -0.82
CACNB3-209ENST00000548860 SPART-AS1P0CW21 52 aa9.91□□□□□ -0.82
CACNB3-209ENST00000548860 CAMK2N2Q96S95 79 aa9.91□□□□□ -0.82
CACNB3-209ENST00000548860 NSD1Q96L73 2696 aaPredicted RBP9.91□□□□□ -0.82
CACNB3-209ENST00000548860 H0YGX0 51 aa9.91□□□□□ -0.82
CACNB3-209ENST00000548860 GIG44P09565 113 aaPredicted RBP9.91□□□□□ -0.82
CACNB3-209ENST00000548860 FSHBP01225 129 aa9.9□□□□□ -0.82
CACNB3-209ENST00000548860 IBA57-AS1B1ANH7 110 aa9.9□□□□□ -0.82
CACNB3-209ENST00000548860 LINC00643Q86TS7 51 aa9.9□□□□□ -0.83
CACNB3-209ENST00000548860 IGHV3OR16-9A0A0B4J2B5 98 aa9.89□□□□□ -0.83
CACNB3-209ENST00000548860 hADV29S1A0JD25 119 aa9.89□□□□□ -0.83
CACNB3-209ENST00000548860 C9orf66Q5T8R8 295 aa9.89□□□□□ -0.83
CACNB3-209ENST00000548860 C1orf43Q9BWL3 253 aa9.89□□□□□ -0.83
CACNB3-209ENST00000548860 CELA1Q9UNI1 258 aa9.89□□□□□ -0.83
CACNB3-209ENST00000548860 TRACP01848 142 aa9.89□□□□□ -0.83
CACNB3-209ENST00000548860 C9orf129Q5T035 196 aaKnown RBP9.88□□□□□ -0.83
CACNB3-209ENST00000548860 SBSPONQ8IVN8 264 aa9.88□□□□□ -0.83
CACNB3-209ENST00000548860 VWFP04275 2813 aa9.88□□□□□ -0.83
CACNB3-209ENST00000548860 HILS1P60008 231 aa9.88□□□□□ -0.83
CACNB3-209ENST00000548860 UBL5Q9BZL1 73 aa9.88□□□□□ -0.83
CACNB3-209ENST00000548860 IGKV2-28A0A075B6P5 120 aa9.87□□□□□ -0.83
CACNB3-209ENST00000548860 A0A087WZ39 114 aa9.87□□□□□ -0.83
CACNB3-209ENST00000548860 IGKV2D-28P01615 120 aa9.87□□□□□ -0.83
CACNB3-209ENST00000548860 OVOL2Q9BRP0 275 aa9.87□□□□□ -0.83
CACNB3-209ENST00000548860 TMEM126AQ9H061 195 aa9.87□□□□□ -0.83
CACNB3-209ENST00000548860 ENHOQ6UWT2 76 aa9.87□□□□□ -0.83
CACNB3-209ENST00000548860 PDZD2O15018 2839 aa9.86□□□□□ -0.83
CACNB3-209ENST00000548860 TENM4Q6N022 2769 aa9.86□□□□□ -0.83
CACNB3-209ENST00000548860 CSDC2Q9Y534 153 aaKnown RBP9.86□□□□□ -0.83
CACNB3-209ENST00000548860 CYSRT1A8MQ03 144 aa9.85□□□□□ -0.83
CACNB3-209ENST00000548860 C10orf25Q5T742 122 aa9.85□□□□□ -0.83
CACNB3-209ENST00000548860 LINC00846Q9NV44 126 aa9.85□□□□□ -0.83
CACNB3-209ENST00000548860 ACYP1P07311 99 aa9.85□□□□□ -0.83
CACNB3-209ENST00000548860 Q6ZQY7 126 aa9.85□□□□□ -0.83
CACNB3-209ENST00000548860 DSCR8Q96T75 97 aa9.85□□□□□ -0.83
CACNB3-209ENST00000548860 SMCR5Q8TEV8 140 aa9.84□□□□□ -0.83
CACNB3-209ENST00000548860 IGLV5-45A0A087WSX0 123 aa9.84□□□□□ -0.83
CACNB3-209ENST00000548860 SMIM9A6NGZ8 99 aa9.84□□□□□ -0.83
CACNB3-209ENST00000548860 PKIGQ9Y2B9 76 aa9.83□□□□□ -0.84
CACNB3-209ENST00000548860 IGHV4-30-4P0DP06 118 aa9.83□□□□□ -0.84
CACNB3-209ENST00000548860 RPL28P46779 137 aaKnown RBP9.83□□□□□ -0.84
CACNB3-209ENST00000548860 NHLRC4P0CG21 123 aaPredicted RBP9.82□□□□□ -0.84
CACNB3-209ENST00000548860 PLAC8L1A1L4L8 177 aa9.82□□□□□ -0.84
CACNB3-209ENST00000548860 CD164L2Q6UWJ8 174 aa9.82□□□□□ -0.84
CACNB3-209ENST00000548860 KRTAP1-3Q8IUG1 177 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms