RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 A0A0U1RQV1 116 aa7.1□□□□□ -1.27
TRAFD1-205ENST00000548277 NDUFC2-KCTD14E9PQ53 114 aa7.1□□□□□ -1.27
TRAFD1-205ENST00000548277 G0S2P27469 103 aa7.1□□□□□ -1.27
TRAFD1-205ENST00000548277 IFITM2Q01629 132 aa7.1□□□□□ -1.27
TRAFD1-205ENST00000548277 C6orf226Q5I0X4 101 aa7.1□□□□□ -1.27
TRAFD1-205ENST00000548277 UQCC3Q6UW78 93 aa7.1□□□□□ -1.27
TRAFD1-205ENST00000548277 FAM19A3Q7Z5A8 133 aa7.1□□□□□ -1.27
TRAFD1-205ENST00000548277 ZNF861PO60384 105 aa7.09□□□□□ -1.27
TRAFD1-205ENST00000548277 CKS1BP61024 79 aa7.09□□□□□ -1.27
TRAFD1-205ENST00000548277 PAPPA-AS1Q5QFB9 102 aa7.09□□□□□ -1.27
TRAFD1-205ENST00000548277 TOMM6Q96B49 74 aa7.09□□□□□ -1.27
TRAFD1-205ENST00000548277 TIMM17AQ99595 171 aa7.09□□□□□ -1.27
TRAFD1-205ENST00000548277 ALKBH7Q9BT30 221 aaPredicted RBP7.09□□□□□ -1.27
TRAFD1-205ENST00000548277 CDKN2A-AS1Q9UH64 79 aa7.09□□□□□ -1.27
TRAFD1-205ENST00000548277 TRAV9-1A0A075B6T8 112 aa7.08□□□□□ -1.28
TRAFD1-205ENST00000548277 HERVK_113P63121 156 aa7.08□□□□□ -1.28
TRAFD1-205ENST00000548277 SEC11AP67812 179 aa7.08□□□□□ -1.28
TRAFD1-205ENST00000548277 Q8IZM0 81 aa7.08□□□□□ -1.28
TRAFD1-205ENST00000548277 SCGB3A1Q96QR1 104 aa7.08□□□□□ -1.28
TRAFD1-205ENST00000548277 GEMIN7Q9H840 131 aaKnown RBP7.08□□□□□ -1.28
TRAFD1-205ENST00000548277 XAGE1AQ9HD64 81 aa7.08□□□□□ -1.28
TRAFD1-205ENST00000548277 C22orf24Q9Y442 160 aa7.08□□□□□ -1.28
TRAFD1-205ENST00000548277 S100PP25815 95 aa7.07□□□□□ -1.28
TRAFD1-205ENST00000548277 ERASQ7Z444 233 aa7.07□□□□□ -1.28
TRAFD1-205ENST00000548277 SEC11CQ9BY50 192 aa7.07□□□□□ -1.28
TRAFD1-205ENST00000548277 CARHSP1Q9Y2V2 147 aaKnown RBP7.07□□□□□ -1.28
TRAFD1-205ENST00000548277 A0A087X002 238 aa7.06□□□□□ -1.28
TRAFD1-205ENST00000548277 GNB1LQ9BYB4 327 aa7.06□□□□□ -1.28
TRAFD1-205ENST00000548277 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
TRAFD1-205ENST00000548277 TYMSOSQ8TAI1 123 aa7.05□□□□□ -1.28
TRAFD1-205ENST00000548277 RETNLBQ9BQ08 111 aa7.05□□□□□ -1.28
TRAFD1-205ENST00000548277 F8VRH5 84 aa7.04□□□□□ -1.28
TRAFD1-205ENST00000548277 FABP9Q0Z7S8 132 aa7.04□□□□□ -1.28
TRAFD1-205ENST00000548277 COMMD7Q86VX2 200 aa7.04□□□□□ -1.28
TRAFD1-205ENST00000548277 TINCRA0A1B0GVN0 87 aa7.03□□□□□ -1.28
TRAFD1-205ENST00000548277 LINC01546A6NGU7 62 aa7.03□□□□□ -1.28
TRAFD1-205ENST00000548277 RPL37AP8A6NKH3 93 aa7.03□□□□□ -1.28
TRAFD1-205ENST00000548277 NUPR1O60356 82 aa7.03□□□□□ -1.28
TRAFD1-205ENST00000548277 COX19Q49B96 90 aa7.03□□□□□ -1.28
TRAFD1-205ENST00000548277 LBHQ53QV2 105 aaPredicted RBP7.03□□□□□ -1.28
TRAFD1-205ENST00000548277 MRPL18Q9H0U6 180 aaKnown RBP7.03□□□□□ -1.28
TRAFD1-205ENST00000548277 CST9LQ9H4G1 147 aa7.03□□□□□ -1.28
TRAFD1-205ENST00000548277 LINC01549A6NIU2 74 aa7.02□□□□□ -1.29
TRAFD1-205ENST00000548277 SMIM1B2RUZ4 78 aa7.02□□□□□ -1.29
TRAFD1-205ENST00000548277 CRYGAP11844 174 aa7.02□□□□□ -1.29
TRAFD1-205ENST00000548277 CXCL5P42830 114 aa7.02□□□□□ -1.29
TRAFD1-205ENST00000548277 PDZD11Q5EBL8 140 aa7.02□□□□□ -1.29
TRAFD1-205ENST00000548277 FA2HQ7L5A8 372 aa7.02□□□□□ -1.29
TRAFD1-205ENST00000548277 COX7B2Q8TF08 81 aa7.02□□□□□ -1.29
TRAFD1-205ENST00000548277 RPS10P5Q9NQ39 176 aa7.02□□□□□ -1.29
TRAFD1-205ENST00000548277 SMCO4Q9NRQ5 59 aa7.02□□□□□ -1.29
TRAFD1-205ENST00000548277 GAGE10A6NGK3 116 aa7.01□□□□□ -1.29
TRAFD1-205ENST00000548277 RPL28P46779 137 aaKnown RBP7.01□□□□□ -1.29
TRAFD1-205ENST00000548277 PMVKQ15126 192 aa7.01□□□□□ -1.29
TRAFD1-205ENST00000548277 C10orf91Q5T1B1 145 aa7.01□□□□□ -1.29
TRAFD1-205ENST00000548277 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
TRAFD1-205ENST00000548277 MRPL55Q7Z7F7 128 aaKnown RBP7.01□□□□□ -1.29
TRAFD1-205ENST00000548277 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
TRAFD1-205ENST00000548277 IGLV5-45A0A087WSX0 123 aa7□□□□□ -1.29
TRAFD1-205ENST00000548277 SPINK8P0C7L1 97 aa7□□□□□ -1.29
TRAFD1-205ENST00000548277 LINC00167Q96N53 147 aa7□□□□□ -1.29
TRAFD1-205ENST00000548277 BCE1O60756 84 aa6.99□□□□□ -1.29
TRAFD1-205ENST00000548277 RAB5BP61020 215 aa6.99□□□□□ -1.29
TRAFD1-205ENST00000548277 RHEBQ15382 184 aa6.99□□□□□ -1.29
TRAFD1-205ENST00000548277 KRTAP13-2Q52LG2 175 aa6.98□□□□□ -1.29
TRAFD1-205ENST00000548277 TP73-AS1Q9UF72 201 aa6.98□□□□□ -1.29
TRAFD1-205ENST00000548277 KRTAP9-6A0A140TA67 174 aa6.97□□□□□ -1.29
TRAFD1-205ENST00000548277 H3BRM9 83 aa6.97□□□□□ -1.29
TRAFD1-205ENST00000548277 NDUFA6P56556 154 aa6.97□□□□□ -1.29
TRAFD1-205ENST00000548277 CDIP1Q9H305 208 aa6.97□□□□□ -1.29
TRAFD1-205ENST00000548277 TRAPPC1Q9Y5R8 145 aa6.97□□□□□ -1.29
TRAFD1-205ENST00000548277 A0A096LNJ9 63 aa6.96□□□□□ -1.3
TRAFD1-205ENST00000548277 UBE2AP49459 152 aa6.96□□□□□ -1.3
TRAFD1-205ENST00000548277 C18orf32Q8TCD1 76 aa6.96□□□□□ -1.3
TRAFD1-205ENST00000548277 URB1-AS1Q96HZ7 61 aa6.96□□□□□ -1.3
TRAFD1-205ENST00000548277 SCO1O75880 301 aa6.95□□□□□ -1.3
TRAFD1-205ENST00000548277 LINC00614P0C842 121 aa6.95□□□□□ -1.3
TRAFD1-205ENST00000548277 IGLC3P0DOY3 106 aa6.95□□□□□ -1.3
TRAFD1-205ENST00000548277 LINC00304Q8N9R0 145 aa6.95□□□□□ -1.3
TRAFD1-205ENST00000548277 ATP5LO75964 103 aa6.94□□□□□ -1.3
TRAFD1-205ENST00000548277 HBDP02042 147 aa6.94□□□□□ -1.3
TRAFD1-205ENST00000548277 APOC3P02656 99 aa6.94□□□□□ -1.3
TRAFD1-205ENST00000548277 PFN2P35080 140 aa6.94□□□□□ -1.3
TRAFD1-205ENST00000548277 PMCHL1Q16048 86 aa6.94□□□□□ -1.3
TRAFD1-205ENST00000548277 IGLV7-46A0A075B6I9 117 aa6.93□□□□□ -1.3
TRAFD1-205ENST00000548277 IGKV2-28A0A075B6P5 120 aa6.93□□□□□ -1.3
TRAFD1-205ENST00000548277 IGLV5-39A0A0G2JS06 123 aa6.93□□□□□ -1.3
TRAFD1-205ENST00000548277 IGKV2D-28P01615 120 aa6.93□□□□□ -1.3
TRAFD1-205ENST00000548277 ZNF22P17026 224 aaPredicted RBP6.93□□□□□ -1.3
TRAFD1-205ENST00000548277 NKAPP1Q8N9T2 125 aa6.93□□□□□ -1.3
TRAFD1-205ENST00000548277 IGLV5-37A0A075B6J1 123 aa6.92□□□□□ -1.3
TRAFD1-205ENST00000548277 IGKV2D-26A0A0A0MRZ7 120 aa6.92□□□□□ -1.3
TRAFD1-205ENST00000548277 PRLHP81277 87 aa6.92□□□□□ -1.3
TRAFD1-205ENST00000548277 BAGE3Q86Y29 109 aa6.92□□□□□ -1.3
TRAFD1-205ENST00000548277 C11orf86A6NJI1 115 aa6.9□□□□□ -1.3
TRAFD1-205ENST00000548277 SNAPINO95295 136 aa6.9□□□□□ -1.3
TRAFD1-205ENST00000548277 FAM19A1Q7Z5A9 133 aa6.9□□□□□ -1.3
TRAFD1-205ENST00000548277 KRTAP13-1Q8IUC0 172 aa6.9□□□□□ -1.3
TRAFD1-205ENST00000548277 ZNF625Q96I27 306 aaPredicted RBP6.9□□□□□ -1.3
TRAFD1-205ENST00000548277 ERG28Q9UKR5 140 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms