RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 COX17Q14061 63 aa9.13□□□□□ -0.95
PTCH1-215ENST00000547672 ENHOQ6UWT2 76 aa9.13□□□□□ -0.95
PTCH1-215ENST00000547672 WFDC10BQ8IUB3 73 aa9.13□□□□□ -0.95
PTCH1-215ENST00000547672 LITAFQ99732 161 aa9.13□□□□□ -0.95
PTCH1-215ENST00000547672 PRO1854Q9UHT4 67 aa9.13□□□□□ -0.95
PTCH1-215ENST00000547672 A0A0B4J2C4 111 aa9.12□□□□□ -0.95
PTCH1-215ENST00000547672 UPK3BQ9BT76 320 aa9.12□□□□□ -0.95
PTCH1-215ENST00000547672 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
PTCH1-215ENST00000547672 A4D1N5 150 aa9.11□□□□□ -0.95
PTCH1-215ENST00000547672 NUPR2A6NF83 97 aa9.11□□□□□ -0.95
PTCH1-215ENST00000547672 H3BUT2 72 aa9.11□□□□□ -0.95
PTCH1-215ENST00000547672 C1orf43Q9BWL3 253 aa9.11□□□□□ -0.95
PTCH1-215ENST00000547672 A0A1W2PPM0 123 aa9.1□□□□□ -0.95
PTCH1-215ENST00000547672 CFC1BP0CG36 223 aa9.1□□□□□ -0.95
PTCH1-215ENST00000547672 CFC1P0CG37 223 aa9.1□□□□□ -0.95
PTCH1-215ENST00000547672 LINC00158P58513 81 aa9.1□□□□□ -0.95
PTCH1-215ENST00000547672 UBE2V1Q13404 147 aa9.1□□□□□ -0.95
PTCH1-215ENST00000547672 ADAMTSL4-AS1Q5T5F5 129 aa9.1□□□□□ -0.95
PTCH1-215ENST00000547672 GAGE10A6NGK3 116 aa9.09□□□□□ -0.95
PTCH1-215ENST00000547672 LINC00308Q8TCZ7 52 aa9.09□□□□□ -0.95
PTCH1-215ENST00000547672 KRTAP3-3Q9BYR6 98 aa9.09□□□□□ -0.95
PTCH1-215ENST00000547672 KRTAP3-2Q9BYR7 98 aa9.09□□□□□ -0.95
PTCH1-215ENST00000547672 ERG28Q9UKR5 140 aa9.09□□□□□ -0.95
PTCH1-215ENST00000547672 LINC00588Q9Y4M8 146 aa9.09□□□□□ -0.95
PTCH1-215ENST00000547672 Q8N3U1 123 aa9.08□□□□□ -0.96
PTCH1-215ENST00000547672 SPAG11BQ08648 103 aa9.07□□□□□ -0.96
PTCH1-215ENST00000547672 PGPEP1Q9NXJ5 209 aa9.07□□□□□ -0.96
PTCH1-215ENST00000547672 ZNF561-AS1K7EIQ3 104 aa9.06□□□□□ -0.96
PTCH1-215ENST00000547672 K7ERJ3 54 aa9.06□□□□□ -0.96
PTCH1-215ENST00000547672 KIAA0087Q14695 138 aa9.06□□□□□ -0.96
PTCH1-215ENST00000547672 COX6CP09669 75 aa9.05□□□□□ -0.96
PTCH1-215ENST00000547672 UBE2DNLQ8IWF7 75 aa9.05□□□□□ -0.96
PTCH1-215ENST00000547672 TRBV20-1A0A075B6N2 111 aa9.04□□□□□ -0.96
PTCH1-215ENST00000547672 IGKV2D-24A0A075B6R9 120 aa9.04□□□□□ -0.96
PTCH1-215ENST00000547672 GVQW2A0A096LPI5 108 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-215ENST00000547672 TRAV13-2A0A0B4J235 113 aa9.04□□□□□ -0.96
PTCH1-215ENST00000547672 MIR7-3HGQ8N6C7 128 aa9.04□□□□□ -0.96
PTCH1-215ENST00000547672 C2orf48Q96LS8 159 aa9.04□□□□□ -0.96
PTCH1-215ENST00000547672 SPCS1Q9Y6A9 102 aa9.04□□□□□ -0.96
PTCH1-215ENST00000547672 TENM3Q9P273 2699 aa9.04□□□□□ -0.96
PTCH1-215ENST00000547672 A0A0U1RRA0 63 aa9.03□□□□□ -0.96
PTCH1-215ENST00000547672 K7EP34 96 aa9.03□□□□□ -0.96
PTCH1-215ENST00000547672 SCGB1C2P0DMR2 95 aa9.03□□□□□ -0.96
PTCH1-215ENST00000547672 PFN2P35080 140 aa9.03□□□□□ -0.96
PTCH1-215ENST00000547672 PSMB2P49721 201 aa9.03□□□□□ -0.96
PTCH1-215ENST00000547672 Q1RN00 199 aa9.03□□□□□ -0.96
PTCH1-215ENST00000547672 APLNQ9ULZ1 77 aa9.03□□□□□ -0.96
PTCH1-215ENST00000547672 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
PTCH1-215ENST00000547672 TRBV30A0A0K0K1B3 111 aa9.02□□□□□ -0.97
PTCH1-215ENST00000547672 TSPAN13O95857 204 aa9.02□□□□□ -0.97
PTCH1-215ENST00000547672 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
PTCH1-215ENST00000547672 NTN5Q8WTR8 489 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-215ENST00000547672 NPC2P61916 151 aa9.01□□□□□ -0.97
PTCH1-215ENST00000547672 KRTAP26-1Q6PEX3 210 aa9.01□□□□□ -0.97
PTCH1-215ENST00000547672 DAND5Q8N907 189 aa9.01□□□□□ -0.97
PTCH1-215ENST00000547672 SND1-IT1Q9HBX3 110 aa9.01□□□□□ -0.97
PTCH1-215ENST00000547672 C2orf82Q6UX34 121 aa9□□□□□ -0.97
PTCH1-215ENST00000547672 NDUFC2O95298 119 aa8.99□□□□□ -0.97
PTCH1-215ENST00000547672 TTC32Q5I0X7 151 aa8.99□□□□□ -0.97
PTCH1-215ENST00000547672 CAMK2N2Q96S95 79 aa8.99□□□□□ -0.97
PTCH1-215ENST00000547672 NAA38Q9BRA0 125 aaKnown RBP8.98□□□□□ -0.97
PTCH1-215ENST00000547672 Q9HAA7 133 aa8.98□□□□□ -0.97
PTCH1-215ENST00000547672 RPL13AP40429 203 aaKnown RBP8.97□□□□□ -0.97
PTCH1-215ENST00000547672 RNF151Q2KHN1 245 aa8.97□□□□□ -0.97
PTCH1-215ENST00000547672 UNQ6190/PRO20217Q6UXQ8 127 aa8.97□□□□□ -0.97
PTCH1-215ENST00000547672 MEGF8Q7Z7M0 2845 aa8.96□□□□□ -0.97
PTCH1-215ENST00000547672 F8W1H4 67 aa8.96□□□□□ -0.98
PTCH1-215ENST00000547672 H7C2G1 150 aa8.96□□□□□ -0.98
PTCH1-215ENST00000547672 SOSTDC1Q6X4U4 206 aa8.96□□□□□ -0.98
PTCH1-215ENST00000547672 SYCNQ0VAF6 134 aa8.94□□□□□ -0.98
PTCH1-215ENST00000547672 ATXN8Q156A1 80 aa8.94□□□□□ -0.98
PTCH1-215ENST00000547672 C14orf177Q52M58 125 aa8.94□□□□□ -0.98
PTCH1-215ENST00000547672 C6orf223Q8N319 242 aa8.94□□□□□ -0.98
PTCH1-215ENST00000547672 CBY1Q9Y3M2 126 aa8.94□□□□□ -0.98
PTCH1-215ENST00000547672 HIGD2BQ4VC39 106 aa8.93□□□□□ -0.98
PTCH1-215ENST00000547672 C15orf56Q8N910 161 aa8.93□□□□□ -0.98
PTCH1-215ENST00000547672 EIF4EBP3O60516 100 aaPredicted RBP8.92□□□□□ -0.98
PTCH1-215ENST00000547672 NDUFC2-KCTD14E9PQ53 114 aa8.91□□□□□ -0.98
PTCH1-215ENST00000547672 PSCAO43653 123 aa8.91□□□□□ -0.98
PTCH1-215ENST00000547672 C10orf25Q5T742 122 aa8.91□□□□□ -0.98
PTCH1-215ENST00000547672 OR13C6PQ8NH95 151 aa8.91□□□□□ -0.98
PTCH1-215ENST00000547672 TMEM126AQ9H061 195 aa8.91□□□□□ -0.98
PTCH1-215ENST00000547672 C6orf48Q9UBA6 75 aa8.91□□□□□ -0.98
PTCH1-215ENST00000547672 HUWE1Q7Z6Z7 4374 aaKnown RBP8.9□□□□□ -0.98
PTCH1-215ENST00000547672 TRBV10-2A0A0K0K1G8 114 aa8.9□□□□□ -0.98
PTCH1-215ENST00000547672 USP17L23D6RBM5 183 aa8.9□□□□□ -0.98
PTCH1-215ENST00000547672 H0YGX0 51 aa8.9□□□□□ -0.98
PTCH1-215ENST00000547672 H3BMG7 143 aa8.9□□□□□ -0.98
PTCH1-215ENST00000547672 TRIAP1O43715 76 aa8.9□□□□□ -0.98
PTCH1-215ENST00000547672 SNCGO76070 127 aa8.9□□□□□ -0.98
PTCH1-215ENST00000547672 RPL28P46779 137 aaKnown RBP8.9□□□□□ -0.98
PTCH1-215ENST00000547672 C9orf116Q5BN46 136 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-215ENST00000547672 PKIGQ9Y2B9 76 aa8.9□□□□□ -0.98
PTCH1-215ENST00000547672 LINC00526Q96FQ7 95 aa8.89□□□□□ -0.99
PTCH1-215ENST00000547672 CARD19Q96LW7 228 aa8.89□□□□□ -0.99
PTCH1-215ENST00000547672 TLX1NBP0CAT3 122 aa8.88□□□□□ -0.99
PTCH1-215ENST00000547672 Q6ZRU5 148 aa8.88□□□□□ -0.99
PTCH1-215ENST00000547672 IGKV2-28A0A075B6P5 120 aa8.87□□□□□ -0.99
PTCH1-215ENST00000547672 NBDYA0A0U1RRE5 68 aa8.87□□□□□ -0.99
PTCH1-215ENST00000547672 TCL1BO95988 128 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms