RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 MRPS36P82909 103 aaKnown RBP7.04□□□□□ -1.28
TRAF1-203ENST00000546084 SND1-IT1Q9HBX3 110 aa7.04□□□□□ -1.28
TRAF1-203ENST00000546084 UBE2D4Q9Y2X8 147 aa7.04□□□□□ -1.28
TRAF1-203ENST00000546084 MPLKIPQ8TAP9 179 aa7.04□□□□□ -1.28
TRAF1-203ENST00000546084 ODF3Q96PU9 254 aa7.04□□□□□ -1.28
TRAF1-203ENST00000546084 H3BT86 120 aa7.03□□□□□ -1.28
TRAF1-203ENST00000546084 BAALC-AS2P0C853 105 aa7.03□□□□□ -1.28
TRAF1-203ENST00000546084 TIRAPP58753 221 aa7.03□□□□□ -1.28
TRAF1-203ENST00000546084 Q6Q795 121 aa7.03□□□□□ -1.28
TRAF1-203ENST00000546084 SPANXDQ9BXN6 97 aa7.03□□□□□ -1.28
TRAF1-203ENST00000546084 DEFB121Q5J5C9 76 aa7.03□□□□□ -1.28
TRAF1-203ENST00000546084 PYGO1Q9Y3Y4 419 aa7.03□□□□□ -1.28
TRAF1-203ENST00000546084 IGLV4-60A0A075B6I1 120 aa7.03□□□□□ -1.28
TRAF1-203ENST00000546084 NBPF19A0A087WUL8 3843 aa7.03□□□□□ -1.28
TRAF1-203ENST00000546084 COX7CP15954 63 aa7.02□□□□□ -1.29
TRAF1-203ENST00000546084 FAM222AQ5U5X8 452 aa7.02□□□□□ -1.29
TRAF1-203ENST00000546084 LINC00336Q6ZUF6 198 aa7.02□□□□□ -1.29
TRAF1-203ENST00000546084 PMAIP1Q13794 54 aa7.02□□□□□ -1.29
TRAF1-203ENST00000546084 CHCHD7Q9BUK0 85 aa7.02□□□□□ -1.29
TRAF1-203ENST00000546084 IGKV3D-7A0A0C4DH55 119 aa7.02□□□□□ -1.29
TRAF1-203ENST00000546084 LST1O00453 97 aa7.02□□□□□ -1.29
TRAF1-203ENST00000546084 LINC00269Q8N2A0 174 aa7.02□□□□□ -1.29
TRAF1-203ENST00000546084 SS18Q15532 418 aa7.01□□□□□ -1.29
TRAF1-203ENST00000546084 C9orf116Q5BN46 136 aaPredicted RBP7.01□□□□□ -1.29
TRAF1-203ENST00000546084 LINC00242Q5T6M2 205 aa7.01□□□□□ -1.29
TRAF1-203ENST00000546084 KLK12Q9UKR0 248 aa7.01□□□□□ -1.29
TRAF1-203ENST00000546084 LECT2O14960 151 aa7.01□□□□□ -1.29
TRAF1-203ENST00000546084 Q8N3U1 123 aa7.01□□□□□ -1.29
TRAF1-203ENST00000546084 TMEM86BQ8N661 226 aa7.01□□□□□ -1.29
TRAF1-203ENST00000546084 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.01□□□□□ -1.29
TRAF1-203ENST00000546084 LITAFQ99732 161 aa7.01□□□□□ -1.29
TRAF1-203ENST00000546084 NCR3O14931 201 aa7□□□□□ -1.29
TRAF1-203ENST00000546084 RPS28P62857 69 aaKnown RBP7□□□□□ -1.29
TRAF1-203ENST00000546084 LINC00308Q8TCZ7 52 aa7□□□□□ -1.29
TRAF1-203ENST00000546084 COX7B2Q8TF08 81 aa7□□□□□ -1.29
TRAF1-203ENST00000546084 C2orf48Q96LS8 159 aa7□□□□□ -1.29
TRAF1-203ENST00000546084 LAMTOR3Q9UHA4 124 aa7□□□□□ -1.29
TRAF1-203ENST00000546084 VWFP04275 2813 aa6.99□□□□□ -1.29
TRAF1-203ENST00000546084 DPH3Q96FX2 82 aa6.99□□□□□ -1.29
TRAF1-203ENST00000546084 XAGE1AQ9HD64 81 aa6.99□□□□□ -1.29
TRAF1-203ENST00000546084 C14orf132Q9NPU4 83 aa6.99□□□□□ -1.29
TRAF1-203ENST00000546084 DAZ2Q13117 558 aaKnown RBP6.98□□□□□ -1.29
TRAF1-203ENST00000546084 NTM-AS1Q6ZSK4 140 aa6.98□□□□□ -1.29
TRAF1-203ENST00000546084 DAZ4Q86SG3 579 aaKnown RBP6.98□□□□□ -1.29
TRAF1-203ENST00000546084 Q8N2B8 174 aa6.98□□□□□ -1.29
TRAF1-203ENST00000546084 DAZ3Q9NR90 486 aaKnown RBP6.98□□□□□ -1.29
TRAF1-203ENST00000546084 FBN1P35555 2871 aaKnown RBP6.98□□□□□ -1.29
TRAF1-203ENST00000546084 HIGD2BQ4VC39 106 aa6.98□□□□□ -1.29
TRAF1-203ENST00000546084 C16orf74Q96GX8 76 aa6.98□□□□□ -1.29
TRAF1-203ENST00000546084 ZNF561-AS1K7EIQ3 104 aa6.98□□□□□ -1.29
TRAF1-203ENST00000546084 FAM240AA0A1B0GVK7 77 aa6.97□□□□□ -1.29
TRAF1-203ENST00000546084 A8MTW9 85 aa6.97□□□□□ -1.29
TRAF1-203ENST00000546084 COX7A2LO14548 114 aa6.97□□□□□ -1.29
TRAF1-203ENST00000546084 NDUFA1O15239 70 aa6.97□□□□□ -1.29
TRAF1-203ENST00000546084 C20orf197Q8N268 126 aa6.97□□□□□ -1.29
TRAF1-203ENST00000546084 LY6G6DO95868 133 aa6.96□□□□□ -1.29
TRAF1-203ENST00000546084 C11orf72Q8NBR9 251 aa6.96□□□□□ -1.29
TRAF1-203ENST00000546084 TIMM17BO60830 172 aa6.96□□□□□ -1.3
TRAF1-203ENST00000546084 SMIM1B2RUZ4 78 aa6.95□□□□□ -1.3
TRAF1-203ENST00000546084 CDC42SE2Q9NRR3 84 aa6.95□□□□□ -1.3
TRAF1-203ENST00000546084 TRBV6-8A0A0A6YYG3 113 aa6.94□□□□□ -1.3
TRAF1-203ENST00000546084 FAM104AQ969W3 186 aa6.94□□□□□ -1.3
TRAF1-203ENST00000546084 CR1P17927 2039 aa6.94□□□□□ -1.3
TRAF1-203ENST00000546084 DEFB105AQ8NG35 78 aa6.94□□□□□ -1.3
TRAF1-203ENST00000546084 TENM1Q9UKZ4 2725 aa6.93□□□□□ -1.3
TRAF1-203ENST00000546084 HAMPP81172 84 aa6.93□□□□□ -1.3
TRAF1-203ENST00000546084 RPL18AQ02543 176 aaKnown RBP6.93□□□□□ -1.3
TRAF1-203ENST00000546084 LINC00643Q86TS7 51 aa6.93□□□□□ -1.3
TRAF1-203ENST00000546084 SMIM26A0A096LP01 95 aa6.93□□□□□ -1.3
TRAF1-203ENST00000546084 TRBV10-1A0A0K0K1A3 114 aa6.93□□□□□ -1.3
TRAF1-203ENST00000546084 NDUFC2-KCTD14E9PQ53 114 aa6.93□□□□□ -1.3
TRAF1-203ENST00000546084 ACYP1P07311 99 aa6.93□□□□□ -1.3
TRAF1-203ENST00000546084 SOSTDC1Q6X4U4 206 aa6.93□□□□□ -1.3
TRAF1-203ENST00000546084 IGKV2D-24A0A075B6R9 120 aa6.92□□□□□ -1.3
TRAF1-203ENST00000546084 SDIM1Q6ZPB5 146 aa6.92□□□□□ -1.3
TRAF1-203ENST00000546084 SPATA3Q8NHX4 192 aa6.92□□□□□ -1.3
TRAF1-203ENST00000546084 INAFM2P0DMQ5 153 aa6.92□□□□□ -1.3
TRAF1-203ENST00000546084 WFDC9Q8NEX5 89 aa6.92□□□□□ -1.3
TRAF1-203ENST00000546084 SPTSSBQ8NFR3 76 aa6.91□□□□□ -1.3
TRAF1-203ENST00000546084 PRO0255Q9UI72 69 aa6.91□□□□□ -1.3
TRAF1-203ENST00000546084 C6orf223Q8N319 242 aa6.91□□□□□ -1.3
TRAF1-203ENST00000546084 TRAV13-2A0A0B4J235 113 aa6.91□□□□□ -1.3
TRAF1-203ENST00000546084 SERP2Q8N6R1 65 aa6.91□□□□□ -1.3
TRAF1-203ENST00000546084 CHCHD10Q8WYQ3 142 aaPredicted RBP6.91□□□□□ -1.3
TRAF1-203ENST00000546084 TENM4Q6N022 2769 aa6.91□□□□□ -1.3
TRAF1-203ENST00000546084 CCL18P55774 89 aa6.9□□□□□ -1.3
TRAF1-203ENST00000546084 FAM218AQ96MZ4 157 aa6.9□□□□□ -1.3
TRAF1-203ENST00000546084 IGHV4-28A0A0C4DH34 117 aa6.9□□□□□ -1.31
TRAF1-203ENST00000546084 REG3AQ06141 175 aa6.9□□□□□ -1.31
TRAF1-203ENST00000546084 SMIM11BQ8TCY0 68 aa6.9□□□□□ -1.31
TRAF1-203ENST00000546084 A0A096LNT2 108 aa6.89□□□□□ -1.31
TRAF1-203ENST00000546084 CMC4P56277 68 aaPredicted RBP6.89□□□□□ -1.31
TRAF1-203ENST00000546084 IMUPQ9GZP8 106 aa6.89□□□□□ -1.31
TRAF1-203ENST00000546084 LINC00959A0A1B0GUT2 108 aa6.89□□□□□ -1.31
TRAF1-203ENST00000546084 SPAG11BQ08648 103 aa6.89□□□□□ -1.31
TRAF1-203ENST00000546084 OTOGQ6ZRI0 2925 aa6.89□□□□□ -1.31
TRAF1-203ENST00000546084 FHL2Q14192 279 aa6.89□□□□□ -1.31
TRAF1-203ENST00000546084 SCXQ7RTU7 201 aa6.89□□□□□ -1.31
TRAF1-203ENST00000546084 LINC01561Q8N1V8 128 aa6.89□□□□□ -1.31
TRAF1-203ENST00000546084 A0A087WYN8 130 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms